Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_E15
(451 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 217 3e-57
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 215 2e-56
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 210 3e-55
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 2e-51
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 97 4e-21
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 91 4e-19
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 5e-19
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 4e-18
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 88 4e-18
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 87 5e-18
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 87 6e-18
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 2e-17
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 82 2e-16
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 6e-13
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 65 2e-11
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 2e-08
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 36 0.020
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.19
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 32 0.19
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 31 0.44
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.77
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 28 3.1
SB_20631| Best HMM Match : KH_2 (HMM E-Value=3.7) 28 3.1
SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 28 4.1
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 4.1
SB_35565| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7) 27 7.2
SB_8890| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 27 9.5
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 27 9.5
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 217 bits (531), Expect = 3e-57
Identities = 100/131 (76%), Positives = 106/131 (80%)
Frame = +2
Query: 59 YKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 238
+KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGK
Sbjct: 212 FKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK 271
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT 418
YVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG + +
Sbjct: 272 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 331
Query: 419 *SEKNPESCDC 451
K ESCDC
Sbjct: 332 VVRKEAESCDC 342
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 215 bits (524), Expect = 2e-56
Identities = 100/129 (77%), Positives = 104/129 (80%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT*S 424
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG + +
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 425 EKNPESCDC 451
K ESCDC
Sbjct: 121 RKEAESCDC 129
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 210 bits (514), Expect = 3e-55
Identities = 96/129 (74%), Positives = 104/129 (80%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT*S 424
PR++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG + +
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 425 EKNPESCDC 451
K ESCDC
Sbjct: 121 RKEAESCDC 129
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 198 bits (482), Expect = 2e-51
Identities = 88/92 (95%), Positives = 90/92 (97%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 340
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 97.5 bits (232), Expect = 4e-21
Identities = 47/73 (64%), Positives = 50/73 (68%)
Frame = +2
Query: 233 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQF 412
GKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG + +
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 413 WT*SEKNPESCDC 451
K ESCDC
Sbjct: 62 LDVVRKEAESCDC 74
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 91.1 bits (216), Expect = 4e-19
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Frame = +2
Query: 53 KKYKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEA 226
K Y+ RE + I GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 430 KDYEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET 489
Query: 227 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A R
Sbjct: 490 GAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 538
Score = 89.4 bits (212), Expect = 1e-18
Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A R
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYAR 105
Score = 30.7 bits (66), Expect = 0.58
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E+VD VLD +RK
Sbjct: 81 GTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRK 124
Score = 30.7 bits (66), Expect = 0.58
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E+VD VLD +RK
Sbjct: 514 GTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRK 557
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 90.6 bits (215), Expect = 5e-19
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Frame = +2
Query: 53 KKYKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEA 226
K Y+ RE V I GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 415 KDYEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET 474
Query: 227 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A R
Sbjct: 475 GAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYAR 523
Score = 70.1 bits (164), Expect = 8e-13
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +2
Query: 110 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLEPGTM 283
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 284 DSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
D VR+G + Q+F P+ + G+ A R
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYAR 90
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G + +D+VLD +RK
Sbjct: 499 GTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRK 542
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G +L++ VLD +RK
Sbjct: 66 GTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRK 109
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 87.8 bits (208), Expect = 4e-18
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Frame = +2
Query: 53 KKYKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEA 226
K Y+ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 801 KDYEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET 860
Query: 227 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
GK+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A R
Sbjct: 861 GAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 909
Score = 85.8 bits (203), Expect = 1e-17
Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 241
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 242 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A R
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYAR 476
Score = 30.3 bits (65), Expect = 0.77
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E++D VLD +RK
Sbjct: 885 GTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRK 928
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E +D VLD +RK
Sbjct: 452 GTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRK 495
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 87.8 bits (208), Expect = 4e-18
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A R
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 105
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E++D VLD RK
Sbjct: 81 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRK 124
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 87.4 bits (207), Expect = 5e-18
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A R
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 690
Score = 86.6 bits (205), Expect = 8e-18
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 241
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 242 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A R
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 169
Score = 65.3 bits (152), Expect = 2e-11
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 241
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 242 VPRAILVDLEPGTMDSV 292
VPRA+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
Score = 31.1 bits (67), Expect = 0.44
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G EL+D VLD +RK
Sbjct: 666 GTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 709
Score = 30.3 bits (65), Expect = 0.77
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E+VD VLD +RK
Sbjct: 145 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 188
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 87.0 bits (206), Expect = 6e-18
Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 241
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 242 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A R
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 104
Score = 30.3 bits (65), Expect = 0.77
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E++D VLD +RK
Sbjct: 80 GTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRK 123
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 85.4 bits (202), Expect = 2e-17
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A R
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 105
Score = 30.7 bits (66), Expect = 0.58
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E++D+VLD +RK
Sbjct: 81 GTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRK 124
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 82.2 bits (194), Expect = 2e-16
Identities = 38/75 (50%), Positives = 47/75 (62%)
Frame = +2
Query: 227 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*ST 406
+GG+YVPR+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA + +
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 407 QFWT*SEKNPESCDC 451
+ K E+CDC
Sbjct: 71 NIFDVLRKEAENCDC 85
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 70.5 bits (165), Expect = 6e-13
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 238
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 239 YVPRAILVDLEPGTMDSVR 295
+VPRA+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 65.3 bits (152), Expect = 2e-11
Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 238
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEP 274
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 56.4 bits (130), Expect = 1e-08
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +2
Query: 197 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+ N ++ E GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A R
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYAR 70
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E +D LD +RK
Sbjct: 46 GTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRK 89
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +2
Query: 218 NEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+EA+ GKYVPRA+LVDLEP +D VR+G + ++ P+ + G+ A R
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYAR 1016
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 1e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 232
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 233 GKY 241
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 122 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 223
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 35.5 bits (78), Expect = 0.020
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 361 NWAKDTNTEGAELVDSVLDVVRK 429
NWAK TEGAEL+DS +D +RK
Sbjct: 8 NWAKGFYTEGAELMDSGMDCIRK 30
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 32.3 bits (70), Expect = 0.19
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 74 IVHIQAGQCGNQIGAKFWEIISDE 145
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
Score = 27.1 bits (57), Expect = 7.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 361 NWAKDTNTEGAELVDSVLDVVRKE 432
NWA + G + +D VLD+V++E
Sbjct: 108 NWAHGFSEHGPKSIDKVLDLVQRE 131
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 32.3 bits (70), Expect = 0.19
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 248 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 358
RA+L+D+E G ++++ GP +F + SG G
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCG 112
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 31.1 bits (67), Expect = 0.44
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G EL+D VLD +RK
Sbjct: 18 GTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 61
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 284 DSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
D VR+G + Q+F P+ + G+ A R
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYAR 42
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 31.1 bits (67), Expect = 0.44
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G EL+D VLD +RK
Sbjct: 6 GTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 31.1 bits (67), Expect = 0.44
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G EL+D VLD +RK
Sbjct: 6 GTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 948
Score = 30.3 bits (65), Expect = 0.77
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -2
Query: 309 PKGPERTESMVPGSRSTRMARGTYLP--PEA 223
PKGPER E+ + R +G YLP PEA
Sbjct: 838 PKGPERKEACLRALGDIRAEKGVYLPSNPEA 868
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -2
Query: 354 APDCPKTKLSGRNICPKGPERTESMVPGSRST 259
A DCP ++ +GR +CP P +S + ++++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_20631| Best HMM Match : KH_2 (HMM E-Value=3.7)
Length = 481
Score = 28.3 bits (60), Expect = 3.1
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -1
Query: 277 AGLEVDEDGAGHVL-ASGGLIVINIDALKLQVRIAVVCTG-GVDAVLVGDDLPEFGSDLV 104
A + V+ D A V+ V+++ A+ + V A V VDAV+V ++ D
Sbjct: 229 AAVVVNVDAAAVVVNVDAAAAVVDVAAVVVDVDAAAVFVNVNVDAVIVNVEVAAVVVDCE 288
Query: 103 TALAGLNVHD 74
A+A +N HD
Sbjct: 289 VAVAVVNAHD 298
>SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -2
Query: 360 VPAPDCPKTKLSGRNICPKGPERTESMVPGSRSTR 256
VPA KT LS R K E+T S PG+R+TR
Sbjct: 52 VPANRLIKTPLSRRE-STKPTEKTGSQTPGNRNTR 85
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 27.9 bits (59), Expect = 4.1
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDE---HGIDPTGAYHGDSDLQLERINVYYNEASGG 235
+RE++ +Q G N +G +W I G P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 236 KYVPRAILVDLE 271
Y PR +L DL+
Sbjct: 83 -YTPRLLLYDLK 93
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +2
Query: 134 ISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 274
+ D G GD L L + +Y E G + V R + LEP
Sbjct: 792 VDDVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEP 838
>SB_35565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 356 RRRTVRKQSCQGGISVRKVPNE 291
RRRT K+ CQG I V + P +
Sbjct: 481 RRRTCNKKDCQGQIHVERSPKD 502
>SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7)
Length = 300
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 179 DSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSV 292
D+D ++ + VYYN +S G+ + ++ LVD P + V
Sbjct: 7 DNDYYMQCLTVYYNGSSAGEILCKS-LVDKIPDALQRV 43
>SB_8890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -1
Query: 364 SCTGAGLSENKVVRAEYLSERSRTNR--VHGAGLEVDEDGAGHVLASGGLIVI 212
SCT G E + + E ER + NR V G E+D+ G ++ G LI I
Sbjct: 44 SCTQLGQGERRSLDIE--DERIKRNRRVVCGCQCEIDKKEGGVLIGKGELISI 94
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 26.6 bits (56), Expect = 9.5
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGID---PTGAYHGDSDLQLERINVYYNEASGG 235
+RE++ +Q G N +G +W I D P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDAASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 236 KYVPRAILVDLE 271
Y PR +L DL+
Sbjct: 83 -YTPRLLLYDLK 93
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E +D LD +RK
Sbjct: 6 GTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRK 49
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,152,380
Number of Sequences: 59808
Number of extensions: 258267
Number of successful extensions: 683
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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