Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_E15
(451 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 213 7e-56
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 203 4e-53
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 197 3e-51
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 197 3e-51
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 196 6e-51
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 195 1e-50
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 137 3e-33
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 137 3e-33
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 93 1e-19
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 92 2e-19
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 92 2e-19
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 92 2e-19
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 90 8e-19
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 90 8e-19
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 87 4e-18
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 87 4e-18
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 87 4e-18
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 87 6e-18
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 87 6e-18
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 87 6e-18
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 87 7e-18
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 85 2e-17
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 79 1e-15
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 77 8e-15
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 77 8e-15
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 70 9e-13
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 29 2.1
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 2.7
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 3.6
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 213 bits (519), Expect = 7e-56
Identities = 99/129 (76%), Positives = 105/129 (81%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT*S 424
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAG + +
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 425 EKNPESCDC 451
K ESCDC
Sbjct: 121 RKEAESCDC 129
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 203 bits (496), Expect = 4e-53
Identities = 93/129 (72%), Positives = 101/129 (78%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT*S 424
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAG + +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 425 EKNPESCDC 451
K E CDC
Sbjct: 121 RKEAEGCDC 129
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 197 bits (481), Expect = 3e-51
Identities = 92/129 (71%), Positives = 100/129 (77%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT*S 424
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAG + +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 425 EKNPESCDC 451
K ES DC
Sbjct: 121 RKEAESTDC 129
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 197 bits (481), Expect = 3e-51
Identities = 92/129 (71%), Positives = 100/129 (77%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT*S 424
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAG + +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 425 EKNPESCDC 451
K ES DC
Sbjct: 121 RKEAESTDC 129
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 196 bits (478), Expect = 6e-51
Identities = 89/129 (68%), Positives = 100/129 (77%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT*S 424
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAG + +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 425 EKNPESCDC 451
K E CDC
Sbjct: 121 RKEAEGCDC 129
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 195 bits (475), Expect = 1e-50
Identities = 88/129 (68%), Positives = 100/129 (77%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT*S 424
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAG + +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 425 EKNPESCDC 451
K E CDC
Sbjct: 121 RKEAEGCDC 129
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 137 bits (332), Expect = 3e-33
Identities = 61/103 (59%), Positives = 77/103 (74%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
PRAILVDL+P +++ VRS +G++F P+N V G+SGAG R
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSR 103
Score = 32.7 bits (71), Expect = 0.13
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 361 NWAKDTNTEGAELVDSVLDVVRKES 435
NW++ +GAE+VD VL V+R+E+
Sbjct: 100 NWSRGYYEQGAEIVDKVLSVIRREA 124
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 137 bits (332), Expect = 3e-33
Identities = 61/103 (59%), Positives = 77/103 (74%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
PRAILVDL+P +++ VRS +G++F P+N V G+SGAG R
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSR 103
Score = 32.7 bits (71), Expect = 0.13
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 361 NWAKDTNTEGAELVDSVLDVVRKES 435
NW++ +GAE+VD VL V+R+E+
Sbjct: 100 NWSRGYYEQGAEIVDKVLSVIRREA 124
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 92.7 bits (220), Expect = 1e-19
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Frame = +2
Query: 56 KYK-MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNE 223
+YK RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E
Sbjct: 3 QYKGSREVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAE 61
Query: 224 ASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 355
+GGK+VPR + VDLEP +D VR+G + +F P+ + G+ A
Sbjct: 62 TAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDA 105
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 91.9 bits (218), Expect = 2e-19
Identities = 39/103 (37%), Positives = 57/103 (55%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
PR+I VDLEP +D +R+G + ++F P+ + G+ A R
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYAR 103
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT++ P Q+ N+A+ T G EL+D+VLD +R+
Sbjct: 79 GTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 91.9 bits (218), Expect = 2e-19
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 238
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+VPRAI VDLEP +D VR+G + ++F P+ + G+ A R
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYAR 105
Score = 26.6 bits (56), Expect = 8.3
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+ P QL N+A+ T G EL+D V+D VR+
Sbjct: 81 GTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRR 124
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 91.9 bits (218), Expect = 2e-19
Identities = 39/103 (37%), Positives = 57/103 (55%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
PR+I VDLEP +D +R+G + ++F P+ + G+ A R
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYAR 103
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT++ P Q+ N+A+ T G EL+D+VLD +R+
Sbjct: 79 GTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 89.8 bits (213), Expect = 8e-19
Identities = 39/103 (37%), Positives = 58/103 (56%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
PR+I VDLEP +D +R+G + ++F P+ + G+ A R
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYAR 103
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT++ P Q+ N+A+ T G EL+D+VLD +R+
Sbjct: 79 GTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 89.8 bits (213), Expect = 8e-19
Identities = 39/103 (37%), Positives = 58/103 (56%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
PR+I VDLEP +D +R+G + ++F P+ + G+ A R
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYAR 103
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT++ P Q+ N+A+ T G EL+D+VLD +R+
Sbjct: 79 GTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 87.4 bits (207), Expect = 4e-18
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 238
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+VPRA++VDLEP +D +R+G + +F P+ + G+ A R
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYAR 105
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R+ P QL N+A+ T G E++D LD +R+
Sbjct: 81 GTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 87.4 bits (207), Expect = 4e-18
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 238
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+VPRA++VDLEP +D +R+G + +F P+ + G+ A R
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYAR 105
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R+ P QL N+A+ T G E++D LD +R+
Sbjct: 81 GTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 87.4 bits (207), Expect = 4e-18
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 238
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+VPRA++VDLEP +D +R+G + +F P+ + G+ A R
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYAR 105
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R+ P QL N+A+ T G E++D LD +R+
Sbjct: 81 GTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 87.0 bits (206), Expect = 6e-18
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYV 244
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
PRAI VDLEP +D +R+G +G +F PD + G+ A R
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYAR 108
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 361 NWAKDTNTEGAELVDSVLDVVRKES 435
N+A+ T G EL+D VLD +RK++
Sbjct: 105 NYARGHYTIGKELIDVVLDRIRKQT 129
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 87.0 bits (206), Expect = 6e-18
Identities = 37/103 (35%), Positives = 57/103 (55%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
PR+I VDLEP +D +R+G + ++F P+ + G+ A R
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYAR 103
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 87.0 bits (206), Expect = 6e-18
Identities = 37/103 (35%), Positives = 57/103 (55%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
PR+I VDLEP +D +R+G + ++F P+ + G+ A R
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYAR 103
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 86.6 bits (205), Expect = 7e-18
Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Frame = +2
Query: 62 KMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGG 235
+ RE++ I GQ G Q+G WE+ EHGI P G + + L ++ N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 236 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
K+VPRAI+VDLEP +D +R+G + +F P+ + G+ A R
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYAR 110
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT++T P QL N+A+ T G E++D V+D VR+
Sbjct: 86 GTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRR 129
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 85.4 bits (202), Expect = 2e-17
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 241
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 242 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
VPRA++VDLEP +D +R+G + +F P+ + G+ A R
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYAR 104
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R+ P QL N+A+ T G E++D LD +R+
Sbjct: 80 GTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 123
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 79.4 bits (187), Expect = 1e-15
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
PR+I VDLEP +D +R+G + ++F P+ + G+ A R
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYAR 102
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +2
Query: 74 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 253
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 254 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQSGAG 358
+LVDLEP ++ + P F +F DN G G
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGG 101
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +2
Query: 74 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 253
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 254 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQSGAG 358
+LVDLEP ++ + P F +F DN G G
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGG 101
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 69.7 bits (163), Expect = 9e-13
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Frame = +2
Query: 143 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQ 313
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 314 IFRPDNFVFGQSGA 355
+F P+ + G+ A
Sbjct: 64 LFHPEQLLSGKEDA 77
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -1
Query: 247 GHVLASGGLIVINIDALKL---QVRIAVVCTGGVDAVLV 140
GH L GL ++N A L Q+ +A +C GG +A V
Sbjct: 347 GHPLGMSGLRIVNSLAYSLAPGQLGVAAICNGGGEATAV 385
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 2.7
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
Frame = -2
Query: 369 GPVVPAPDCPKTKLSGRNICPKGPERTESMVPGSRSTRMARGTYLPPEASL**TLMRSSC 190
GP P+P+ KT P+ PE E + PG+ + PE S +
Sbjct: 492 GPAQPSPNAVKTSYGSSPAAPRVPEMIE-VAPGNVEKTPDQTDNQVPETSHEMAPAPAPQ 550
Query: 189 KS-ESPWYAPVGSMPCSSEMIS 127
S SP Y P S P M S
Sbjct: 551 PSPSSPVYGPTPSEPAKPSMPS 572
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 131 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 268
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,711,765
Number of Sequences: 27780
Number of extensions: 191834
Number of successful extensions: 586
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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