Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_E15
(451 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 197 2e-51
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 194 2e-50
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 194 2e-50
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 192 1e-49
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 191 2e-49
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 191 2e-49
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 191 2e-49
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 189 7e-49
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 189 9e-49
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 93 1e-19
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 93 1e-19
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 92 1e-19
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 90 6e-19
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 90 6e-19
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 88 3e-18
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 88 3e-18
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 84 5e-17
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 83 6e-17
At4g37190.1 68417.m05265 expressed protein 34 0.051
At1g49570.1 68414.m05558 peroxidase, putative identical to perox... 29 1.9
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 28 2.5
At1g17210.1 68414.m02097 expressed protein distantly related to ... 28 2.5
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 23 3.1
At2g23080.2 68415.m02751 casein kinase II alpha chain, putative ... 28 3.4
At2g23080.1 68415.m02752 casein kinase II alpha chain, putative ... 28 3.4
At5g01050.1 68418.m00008 laccase family protein / diphenol oxida... 27 4.4
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 4.4
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 27 5.9
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 5.9
At1g51130.1 68414.m05748 expressed protein similar to unknown pr... 27 7.7
At1g31850.3 68414.m03915 dehydration-responsive protein, putativ... 27 7.7
At1g31850.2 68414.m03914 dehydration-responsive protein, putativ... 27 7.7
At1g31850.1 68414.m03913 dehydration-responsive protein, putativ... 27 7.7
At1g27595.1 68414.m03365 expressed protein similar to Symplekin ... 27 7.7
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 197 bits (481), Expect = 2e-51
Identities = 89/130 (68%), Positives = 103/130 (79%), Gaps = 1/130 (0%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 241
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 242 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT* 421
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAG + +
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 422 SEKNPESCDC 451
K E+CDC
Sbjct: 121 VRKEAENCDC 130
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 194 bits (473), Expect = 2e-50
Identities = 88/129 (68%), Positives = 101/129 (78%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT*S 424
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAG + +
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 425 EKNPESCDC 451
K E+CDC
Sbjct: 121 RKEAENCDC 129
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 194 bits (473), Expect = 2e-50
Identities = 90/130 (69%), Positives = 101/130 (77%), Gaps = 1/130 (0%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 241
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 242 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT* 421
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAG + +
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 422 SEKNPESCDC 451
K E+CDC
Sbjct: 121 VRKEAENCDC 130
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 192 bits (467), Expect = 1e-49
Identities = 89/129 (68%), Positives = 99/129 (76%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT*S 424
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAG + +
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 EKNPESCDC 451
K E+CDC
Sbjct: 121 RKEAENCDC 129
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 191 bits (466), Expect = 2e-49
Identities = 87/129 (67%), Positives = 99/129 (76%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT*S 424
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAG + +
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 EKNPESCDC 451
K E+CDC
Sbjct: 121 RKEAENCDC 129
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 191 bits (466), Expect = 2e-49
Identities = 87/129 (67%), Positives = 99/129 (76%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT*S 424
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAG + +
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 EKNPESCDC 451
K E+CDC
Sbjct: 121 RKEAENCDC 129
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 191 bits (465), Expect = 2e-49
Identities = 85/98 (86%), Positives = 92/98 (93%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 358
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAG
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAG 98
Score = 44.8 bits (101), Expect = 3e-05
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +1
Query: 361 NWAKDTNTEGAELVDSVLDVVRKES 435
NWAK TEGAEL+DSVLDVVRKE+
Sbjct: 100 NWAKGHYTEGAELIDSVLDVVRKEA 124
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 189 bits (461), Expect = 7e-49
Identities = 86/129 (66%), Positives = 100/129 (77%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT*S 424
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAG + +
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 EKNPESCDC 451
K E+CDC
Sbjct: 121 RKEAENCDC 129
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 189 bits (460), Expect = 9e-49
Identities = 85/129 (65%), Positives = 99/129 (76%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPRTLTQKALS*STQFWT*S 424
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAG + +
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 EKNPESCDC 451
K E+CDC
Sbjct: 121 RKEAENCDC 129
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 92.7 bits (220), Expect = 1e-19
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A R
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 105
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E+VD LD VRK
Sbjct: 81 GTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 92.7 bits (220), Expect = 1e-19
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A R
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 105
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E+VD LD VRK
Sbjct: 81 GTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 92.3 bits (219), Expect = 1e-19
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A R
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 105
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E+VD+ L+ +RK
Sbjct: 81 GTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRK 124
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 90.2 bits (214), Expect = 6e-19
Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A R
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 105
Score = 27.9 bits (59), Expect = 3.4
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E+VD LD +RK
Sbjct: 81 GTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 90.2 bits (214), Expect = 6e-19
Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A R
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 105
Score = 27.9 bits (59), Expect = 3.4
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E+VD LD +RK
Sbjct: 81 GTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 87.8 bits (208), Expect = 3e-18
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A R
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 105
Score = 27.9 bits (59), Expect = 3.4
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E+VD LD +RK
Sbjct: 81 GTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 87.8 bits (208), Expect = 3e-18
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGTTGPR 373
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A R
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 105
Score = 27.9 bits (59), Expect = 3.4
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 298 GTFRTDIPP*QLCFRTVRRRYNWAKDTNTEGAELVDSVLDVVRK 429
GT+R P QL N+A+ T G E+VD LD +RK
Sbjct: 81 GTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 83.8 bits (198), Expect = 5e-17
Identities = 35/97 (36%), Positives = 58/97 (59%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 247
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 248 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 358
RA+L+DLEP ++ +++G + ++ +N G G
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGG 99
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 83.4 bits (197), Expect = 6e-17
Identities = 35/97 (36%), Positives = 58/97 (59%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 247
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 248 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 358
RA+L+DLEP ++ +++G + ++ +N G G
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGG 99
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.9 bits (74), Expect = 0.051
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 232
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 233 GKYVPRAILVDLEP--GTMDS 289
Y PR + V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At1g49570.1 68414.m05558 peroxidase, putative identical to
peroxidase ATP5a [Arabidopsis thaliana]
gi|1546702|emb|CAA67341; similar to peroxidase
SWISS-PROT:P80679 from [Armoracia rusticana]
Length = 350
Score = 28.7 bits (61), Expect = 1.9
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 307 ERSRTNRVHGAGLEVDEDGAGHVLASGGLIVINIDALKLQVRIAVVCTGG 158
+ ++ NR G EV ED + +S L V D + L R AVV TGG
Sbjct: 111 KNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGG 160
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 357 PAPDCPKTKLSGRNICPKGPERTESMVPG-SRSTRMARGT 241
PAP P L NICP G + M SRS + GT
Sbjct: 129 PAPTSPANVLPTGNICPSGKIQITGMTQSRSRSDVLGSGT 168
>At1g17210.1 68414.m02097 expressed protein distantly related to
dentin phosphoryn [Homo sapiens] (GI:4322670)
Length = 958
Score = 28.3 bits (60), Expect = 2.5
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Frame = -2
Query: 348 DCPK-TKLSGRNICPKGPERTESMV--PG------SRSTRMARGTY--LPPE 226
DC + + S RN CP GP R +S + PG S S+R A G Y L PE
Sbjct: 280 DCEEHSAQSARNGCPSGPARNQSRLQDPGPSRKQFSASSRKASGNYEVLGPE 331
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 23.4 bits (48), Expect(2) = 3.1
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -1
Query: 286 VHGAGLEVDEDGAG-HVLASGGLIVINIDA 200
+ G G+ VD GAG H+ A ++I A
Sbjct: 176 IEGTGVFVDGPGAGKHIQAGASKVIITAPA 205
Score = 23.0 bits (47), Expect(2) = 3.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 127 PEFGSDLVTALAGLNVHDFPHFVFFIL 47
P G+D+ T + G+N D+ H V I+
Sbjct: 204 PAKGADIPTYVMGVNEQDYGHDVANII 230
>At2g23080.2 68415.m02751 casein kinase II alpha chain, putative
identical to probable casein kinase II, alpha chain
[Arabidopsis thaliana] SWISS-PROT:O64817; similar to
casein kinase II, alpha chain 1 [Arabidopsis thaliana]
SWISS-PROT:Q08467
Length = 307
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 53 KKYKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPT 163
KK K++ + I CG K ++I+ DEH P+
Sbjct: 69 KKKKIKREIKILQNLCGGPNIVKLYDIVRDEHSKTPS 105
>At2g23080.1 68415.m02752 casein kinase II alpha chain, putative
identical to probable casein kinase II, alpha chain
[Arabidopsis thaliana] SWISS-PROT:O64817; similar to
casein kinase II, alpha chain 1 [Arabidopsis thaliana]
SWISS-PROT:Q08467
Length = 333
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 53 KKYKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPT 163
KK K++ + I CG K ++I+ DEH P+
Sbjct: 69 KKKKIKREIKILQNLCGGPNIVKLYDIVRDEHSKTPS 105
>At5g01050.1 68418.m00008 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 586
Score = 27.5 bits (58), Expect = 4.4
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = -2
Query: 279 VPGSRSTRMARGTYLPPEASL**TLMRSSCKSESPWYAPVGSMPCSSEMISQNLAPIWLP 100
VP S T+ RG + A+ SS PW P +P + S + + P
Sbjct: 289 VPASPDTKPTRGLIVYEGAT-------SSSSPTKPWMPPANDIPTAHRFSSNITSLVGGP 341
Query: 99 HW 94
HW
Sbjct: 342 HW 343
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 4.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 71 EIVHIQAGQCGNQIGAKFWEIISD 142
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 113 GAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 262
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 86 QAGQCGNQIGAKFWEIISDEHGIDPTGAYHG 178
QA G IG ++W IIS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
>At1g51130.1 68414.m05748 expressed protein similar to unknown
protein GI:9294403 from [Arabidopsis thaliana]
Length = 403
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = -1
Query: 373 PWPSCTGAGLSENKVVRAEYLSERSRTNRVHGAGLEVDEDGAGHVL 236
P P G+S+ +++R++YLS ++ N +++D D ++
Sbjct: 47 PPPQEEEQGISDRRILRSKYLSLQNEINDCKDDLMKIDSDKFSRII 92
>At1g31850.3 68414.m03915 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -2
Query: 372 LGPVVPAPDCPKTKLSGRNICPKGPER 292
L P V AP PK K SG PK PER
Sbjct: 384 LRPCVVAPT-PKVKKSGLGSIPKWPER 409
>At1g31850.2 68414.m03914 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -2
Query: 372 LGPVVPAPDCPKTKLSGRNICPKGPER 292
L P V AP PK K SG PK PER
Sbjct: 384 LRPCVVAPT-PKVKKSGLGSIPKWPER 409
>At1g31850.1 68414.m03913 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -2
Query: 372 LGPVVPAPDCPKTKLSGRNICPKGPER 292
L P V AP PK K SG PK PER
Sbjct: 384 LRPCVVAPT-PKVKKSGLGSIPKWPER 409
>At1g27595.1 68414.m03365 expressed protein similar to Symplekin
(SP:Q92797) {Homo sapiens}
Length = 1091
Score = 26.6 bits (56), Expect = 7.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 165 PVGSMPCSSEMISQNLAPIW 106
PVG C SE ++Q L +W
Sbjct: 655 PVGKEVCDSERVTQGLGAVW 674
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,160,698
Number of Sequences: 28952
Number of extensions: 182779
Number of successful extensions: 557
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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