Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_E13
         (622 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr...   182   2e-46
Z81492-5|CAB04024.1|  368|Caenorhabditis elegans Hypothetical pr...    41   8e-04
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical...    36   0.023
Z81127-3|CAB03388.2|  310|Caenorhabditis elegans Hypothetical pr...    29   2.7  

>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical protein
            F38E11.5 protein.
          Length = 1000

 Score =  182 bits (442), Expect = 2e-46
 Identities = 92/205 (44%), Positives = 129/205 (62%)
 Frame = +2

Query: 8    DKELNIISYSLLVSVLEYQTAVMRGDFETADRVLPTVPHDQRTRVAHFLEKQGFKQQALA 187
            DK+LN+ISY LL+SVLEYQTAVMR DF+TAD+VL T+P +QRTRVAHFLEKQGFK+QALA
Sbjct: 576  DKDLNVISYKLLLSVLEYQTAVMRRDFDTADKVLTTIPKEQRTRVAHFLEKQGFKKQALA 635

Query: 188  VSTEPEHQFELALSLGELHXXXXXXXXXXXXXXXXXXXXXARWSKLGTXXXXXXDTELTK 367
            VS +P+H+F+L+++LG+L                       +W  L        +  L  
Sbjct: 636  VSQDPDHKFDLSVALGDL---------KTAYDLALQSDSEEKWKALSNAATLKSELLLAG 686

Query: 368  ICYQNARDYSALLLFAVSIGDKELLQQVAQVSSEHGDDXIAFVAYFTLNELDSCLELLIS 547
             C   ARD+  L+L A   G   LLQ++A  S+      I+F++   L ++D+CL+ LIS
Sbjct: 687  ECLGRARDFGGLMLLATCAGSAPLLQKLADDSAAAESHNISFLSSLLLGDIDACLDKLIS 746

Query: 548  RGTISEAALFARSYVPSKVCEVVKL 622
             G + EAA  AR++ PS+V  +++L
Sbjct: 747  TGRLPEAAFLARTHAPSRVSSILEL 771


>Z81492-5|CAB04024.1|  368|Caenorhabditis elegans Hypothetical
           protein E03H4.8 protein.
          Length = 368

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 19/29 (65%), Positives = 21/29 (72%)
 Frame = +2

Query: 8   DKELNIISYSLLVSVLEYQTAVMRGDFET 94
           DK+LN+ISY L  S LEYQTA MR D  T
Sbjct: 289 DKDLNVISYELFQSDLEYQTATMRRDIGT 317


>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
            protein Y71F9AL.17 protein.
          Length = 1232

 Score = 35.9 bits (79), Expect = 0.023
 Identities = 31/157 (19%), Positives = 64/157 (40%)
 Frame = +2

Query: 149  FLEKQGFKQQALAVSTEPEHQFELALSLGELHXXXXXXXXXXXXXXXXXXXXXARWSKLG 328
            +LEK+G+ + AL    + + +F LA+  G L                      A W  LG
Sbjct: 632  YLEKKGYPEIALHFVKDEKTRFGLAIECGNLEIALEAAKKLDEP---------AVWEALG 682

Query: 329  TXXXXXXDTELTKICYQNARDYSALLLFAVSIGDKELLQQVAQVSSEHGDDXIAFVAYFT 508
                   + ++ ++ YQ  +++  L       G+ + L ++ +++    D    F     
Sbjct: 683  ETALLQGNHQIVEMSYQRTKNFEKLSFLYFVTGNTDKLVKMMKIAQARNDAHGHFQTALY 742

Query: 509  LNELDSCLELLISRGTISEAALFARSYVPSKVCEVVK 619
              +++  +++L + G  S A L A ++  S   E +K
Sbjct: 743  TGDVEERVKVLRNCGQTSLAYLAAATHGYSAEAEELK 779


>Z81127-3|CAB03388.2|  310|Caenorhabditis elegans Hypothetical
           protein T22G5.3 protein.
          Length = 310

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 458 VSSEHGDDXIAFVAYFTLNELDSCLELLISRGTISEAALFARSYVPSK 601
           +S E  DD   F+A+  LN++D    +   R T  E  LF    +P K
Sbjct: 143 ISREETDDICNFIAWDRLNQVDDLTFITYFRLTDKEFHLFKVKILPKK 190


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,537,031
Number of Sequences: 27780
Number of extensions: 225092
Number of successful extensions: 558
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)