Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_E11
         (419 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19363| Best HMM Match : Neuromodulin (HMM E-Value=1.4)              29   1.2  
SB_14294| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   2.7  
SB_32009| Best HMM Match : PKD (HMM E-Value=1.9e-19)                   27   4.8  
SB_12515| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.8  
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.8  
SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.3  
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.3  
SB_29121| Best HMM Match : Toxin_12 (HMM E-Value=8.7)                  27   8.3  
SB_27850| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.3  
SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038)                 27   8.3  

>SB_19363| Best HMM Match : Neuromodulin (HMM E-Value=1.4)
          Length = 361

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +1

Query: 295 EIDKFLGDVDYSEATNPYISLSKTFS 372
           ++D F GD+  +EA+NP+I+  K  S
Sbjct: 216 DMDSFTGDIPETEASNPFIAPQKVVS 241


>SB_14294| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 355

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 25  VFWLSTTRGRVNMIKLYLFAVIAVCNVRAF 114
           + WL    G+ + + +Y + V+A CN+  F
Sbjct: 264 IMWLWLDFGKADQVFVYFWEVVAFCNIMTF 293


>SB_32009| Best HMM Match : PKD (HMM E-Value=1.9e-19)
          Length = 3083

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 79   FAVIAVCNVRAFYFFDHEYNRTALGDAIDKTSMKLLKEAYTS 204
            + +  V  ++  + F+H Y+R  +  AI K S  L+KE  TS
Sbjct: 1218 YGISNVLPLKKAFTFNHTYSRHGIFKAILKGSGNLIKEEVTS 1259


>SB_12515| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 769

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
 Frame = +1

Query: 139 RTALGDAIDKTSMKLLKEAYTSGKDKNVVSSPLGVMMLMLLYK--SGAGEGSRVEIDKFL 312
           R    D +D   ++  K  +     ++      G++ + +L    S +    R+E+ K L
Sbjct: 529 RMRFSDTVDIVDVEEAKRLHREALKQSATDPKTGLIDISILTTGLSASDRKRRLELAKSL 588

Query: 313 GDVDYSEATNPYISLSKTFSEM 378
             +  S+   P +   KTFSEM
Sbjct: 589 KALLTSKGKVPTVDYQKTFSEM 610


>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 994

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -1

Query: 368 KVLLRLMY-GLVASL*STSPKNLSISTRLPSPAPDL*RSISIITPNGE 228
           K+  R +Y  +V  L   S ++L+I  R PSP+PD  R  S  +P+ +
Sbjct: 271 KLKTRFLYLKVVIKLEGGSDEDLAILDRSPSPSPDRRRQRSQSSPHSD 318


>SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1181

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 319 VDYSEATNPYISLSKTFSEMNPDFFTMA 402
           +  S AT P+I +  T    NP+FF ++
Sbjct: 276 IKQSNATTPFIVIQNTLEVKNPNFFEVS 303


>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1446

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -1

Query: 335  ASL*STSPKNLSISTRLPSPAPDL*RSISIITPNGEDTT 219
            ASL  TSP +L+ ++++  P P   R+ISI  P+   TT
Sbjct: 972  ASLAHTSPAHLATASQITHPLPH--RTISIPYPSPPHTT 1008


>SB_29121| Best HMM Match : Toxin_12 (HMM E-Value=8.7)
          Length = 497

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +3

Query: 12  SVHYCILVVDYARTSQHDQVIFIRGYRGLQRASILFL 122
           S +  ++ V Y RTSQ+  ++F+   R  Q  S++F+
Sbjct: 404 SQNQSLVCVYYMRTSQNQSLVFVYYLRTSQNQSLVFV 440


>SB_27850| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 716

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 216 LVLPRCICFLKEFHRGFINGVT*GCPVVLVVKEIECSHVADR 91
           L LP   C L+E    F+ GV    PV+ +   +EC H   R
Sbjct: 43  LHLPTRSCVLEEDFEDFLRGVQMNDPVLRI--NVECFHYGSR 82


>SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038)
          Length = 1172

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +1

Query: 130 EYNRTALGDAIDKTSMKLLKEAYTSGKDKNVVSSPLG 240
           EYNR A    +DK+ MK++K AY   + KNV+   +G
Sbjct: 152 EYNRFA---RVDKSYMKMMKRAY---ETKNVLQCCVG 182


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,920,607
Number of Sequences: 59808
Number of extensions: 257337
Number of successful extensions: 605
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 789494848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)