BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_E09
(505 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113534-1|AAM29539.1| 159|Drosophila melanogaster RE60882p pro... 69 4e-12
AY071565-1|AAL49187.1| 159|Drosophila melanogaster RE63144p pro... 69 4e-12
AE014134-2485|AAF53387.1| 159|Drosophila melanogaster CG7532-PA... 69 4e-12
AY118595-1|AAM49964.1| 647|Drosophila melanogaster LD47639p pro... 56 2e-08
AE013599-2163|AAF58074.2| 647|Drosophila melanogaster CG8399-PA... 56 2e-08
AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellula... 29 4.7
AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellula... 29 4.7
AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellula... 29 4.7
AE014297-4737|AAF57145.2| 1284|Drosophila melanogaster CG11339-P... 29 4.7
AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-P... 29 4.7
AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-P... 29 4.7
AE014296-656|AAN11565.1| 717|Drosophila melanogaster CG12010-PB... 28 6.2
AE014296-655|AAF47769.1| 736|Drosophila melanogaster CG12010-PA... 28 6.2
>AY113534-1|AAM29539.1| 159|Drosophila melanogaster RE60882p
protein.
Length = 159
Score = 68.9 bits (161), Expect = 4e-12
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Frame = +1
Query: 103 GAPPSACFDMIPGHAADVQTVPAPYTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEA 282
GAP +AC D+ P H A +Q PY+I + S V++ + + + G D+ G +++A
Sbjct: 21 GAPKAACRDLTPQHGAKLQVTKPPYSI-SGPSHVRSDQKLTLTLGG----DEFLGFMIQA 75
Query: 283 RQG-DKIVGTWTISPDDTFSQPLNCGEPNNAVTHKMHAKELDRQTVSYPWTAPKDLEGDV 459
R G +++VG + + D SQ L+C ++ +TH K +++ W P +G+V
Sbjct: 76 RDGQNRVVGQFQV-VDSVHSQTLDCSGKDDTITHLSAQKGKPLTGITFDWIPPAGYKGNV 134
Query: 460 VFKVTHCQ 483
F T Q
Sbjct: 135 KFMATVVQ 142
>AY071565-1|AAL49187.1| 159|Drosophila melanogaster RE63144p
protein.
Length = 159
Score = 68.9 bits (161), Expect = 4e-12
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Frame = +1
Query: 103 GAPPSACFDMIPGHAADVQTVPAPYTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEA 282
GAP +AC D+ P H A +Q PY+I + S V++ + + + G D+ G +++A
Sbjct: 21 GAPKAACRDLTPQHGAKLQVTKPPYSI-SGPSHVRSDQKLTLTLGG----DEFLGFMIQA 75
Query: 283 RQG-DKIVGTWTISPDDTFSQPLNCGEPNNAVTHKMHAKELDRQTVSYPWTAPKDLEGDV 459
R G +++VG + + D SQ L+C ++ +TH K +++ W P +G+V
Sbjct: 76 RDGQNRVVGQFQV-VDSVHSQTLDCSGKDDTITHLSAQKGKPLTGITFDWIPPAGYKGNV 134
Query: 460 VFKVTHCQ 483
F T Q
Sbjct: 135 KFMATVVQ 142
>AE014134-2485|AAF53387.1| 159|Drosophila melanogaster CG7532-PA
protein.
Length = 159
Score = 68.9 bits (161), Expect = 4e-12
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Frame = +1
Query: 103 GAPPSACFDMIPGHAADVQTVPAPYTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEA 282
GAP +AC D+ P H A +Q PY+I + S V++ + + + G D+ G +++A
Sbjct: 21 GAPKAACRDLTPQHGAKLQVTKPPYSI-SGPSHVRSDQKLTLTLGG----DEFLGFMIQA 75
Query: 283 RQG-DKIVGTWTISPDDTFSQPLNCGEPNNAVTHKMHAKELDRQTVSYPWTAPKDLEGDV 459
R G +++VG + + D SQ L+C ++ +TH K +++ W P +G+V
Sbjct: 76 RDGQNRVVGQFQV-VDSVHSQTLDCSGKDDTITHLSAQKGKPLTGITFDWIPPAGYKGNV 134
Query: 460 VFKVTHCQ 483
F T Q
Sbjct: 135 KFMATVVQ 142
>AY118595-1|AAM49964.1| 647|Drosophila melanogaster LD47639p
protein.
Length = 647
Score = 56.4 bits (130), Expect = 2e-08
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Frame = +1
Query: 97 PTGAPPSACFDMIPGHAAD---VQTVPAPYTITTAVSSVKAGHSIDVVISGKTPEDKMAG 267
P GAP + C M+P H+ Q +P+++ T+ S++ G ++ V ++G G
Sbjct: 32 PQGAPETVCDTMLPFHSGGSVLPQNSVSPFSVETSSSTLGQGQTLRVDLTGVPAGLSFGG 91
Query: 268 ILLEARQGD---KIVGTWTISPDDTFSQPLNC-GEPNNAVTHKMHAKELDRQTVSYPWTA 435
+++AR + +I+G + + D T + +NC NN+ T H+ +Q V W +
Sbjct: 92 YMIQARNRNPPHQIIGQFGPARDGTI-KLMNCENSVNNSAT---HSNAGPKQQVILEWQS 147
Query: 436 PKDLEGDVVFKVTHCQ 483
P D G VVF T Q
Sbjct: 148 PVDFLGQVVFNATIAQ 163
>AE013599-2163|AAF58074.2| 647|Drosophila melanogaster CG8399-PA
protein.
Length = 647
Score = 56.4 bits (130), Expect = 2e-08
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Frame = +1
Query: 97 PTGAPPSACFDMIPGHAAD---VQTVPAPYTITTAVSSVKAGHSIDVVISGKTPEDKMAG 267
P GAP + C M+P H+ Q +P+++ T+ S++ G ++ V ++G G
Sbjct: 32 PQGAPETVCDTMLPFHSGGSVLPQNSVSPFSVETSSSTLGQGQTLRVDLTGVPAGLSFGG 91
Query: 268 ILLEARQGD---KIVGTWTISPDDTFSQPLNC-GEPNNAVTHKMHAKELDRQTVSYPWTA 435
+++AR + +I+G + + D T + +NC NN+ T H+ +Q V W +
Sbjct: 92 YMIQARNRNPPHQIIGQFGPARDGTI-KLMNCENSVNNSAT---HSNAGPKQQVILEWQS 147
Query: 436 PKDLEGDVVFKVTHCQ 483
P D G VVF T Q
Sbjct: 148 PVDFLGQVVFNATIAQ 163
>AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellular
matrix protein papilin3 protein.
Length = 2898
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 189 CSDGVRRWYCLNISSVPWDHVEARARRCS 103
CS G RR++ N P + + RA++CS
Sbjct: 95 CSGGSRRYFSCNTQDCPEEESDFRAQQCS 123
>AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellular
matrix protein papilin2 protein.
Length = 2776
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 189 CSDGVRRWYCLNISSVPWDHVEARARRCS 103
CS G RR++ N P + + RA++CS
Sbjct: 95 CSGGSRRYFSCNTQDCPEEESDFRAQQCS 123
>AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellular
matrix protein papilinprotein.
Length = 2174
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 189 CSDGVRRWYCLNISSVPWDHVEARARRCS 103
CS G RR++ N P + + RA++CS
Sbjct: 95 CSGGSRRYFSCNTQDCPEEESDFRAQQCS 123
>AE014297-4737|AAF57145.2| 1284|Drosophila melanogaster CG11339-PA
protein.
Length = 1284
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +3
Query: 51 LRSSSCIGGGAYQRLPHRSTA*RVLRHDPRARC*CSDSTSALHHHYSCQLGKSWSFH*RG 230
+RS+S GGG + H S H P + + +TS+ HH+ Q S S
Sbjct: 457 VRSASTAGGGLHHHHSHHSHG-HGTSHHPHHQSSSAGATSSTSHHHRQQRASSSS---AS 512
Query: 231 YQRQNTRRQN-GRHPPGSSSG*QDRRH 308
+Q+Q R + H S + +H
Sbjct: 513 HQQQRYRSSSVESHSSNDSRSTRKHKH 539
>AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-PA,
isoform A protein.
Length = 2894
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 189 CSDGVRRWYCLNISSVPWDHVEARARRCS 103
CS G RR++ N P + + RA++CS
Sbjct: 95 CSGGSRRYFSCNTQDCPEEESDFRAQQCS 123
>AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-PB,
isoform B protein.
Length = 2772
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 189 CSDGVRRWYCLNISSVPWDHVEARARRCS 103
CS G RR++ N P + + RA++CS
Sbjct: 95 CSGGSRRYFSCNTQDCPEEESDFRAQQCS 123
>AE014296-656|AAN11565.1| 717|Drosophila melanogaster CG12010-PB,
isoform B protein.
Length = 717
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 105 SGGVSAGKRHHRCNCYYVSEHHLFYKFQG 19
SG +S R H CNC+Y++ + + G
Sbjct: 234 SGLLSEFLRRHSCNCFYITASQVLRSYPG 262
>AE014296-655|AAF47769.1| 736|Drosophila melanogaster CG12010-PA,
isoform A protein.
Length = 736
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 105 SGGVSAGKRHHRCNCYYVSEHHLFYKFQG 19
SG +S R H CNC+Y++ + + G
Sbjct: 234 SGLLSEFLRRHSCNCFYITASQVLRSYPG 262
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,768,809
Number of Sequences: 53049
Number of extensions: 630219
Number of successful extensions: 1682
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1679
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -