Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_E06
         (459 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    25   0.45 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   1.0  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   1.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   2.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.3  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   9.6  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 0.45
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 258 PYLNSGGFIGYLPEVAEILN 317
           PY N+ GF+ Y     EILN
Sbjct: 299 PYTNATGFLAYYEICPEILN 318


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
 Frame = +3

Query: 3   DMNHPGGGQKVNLLKNK-LKEIV---KSGDKNKIILFTDSYDIMYLGTIKEILE 152
           DMNHPG   K    + K + EI    K GD    I +T++    +      +LE
Sbjct: 218 DMNHPGFADKEYRARRKEIAEIAFAYKYGDPIPYIQYTETETKTWGSVFNTVLE 271


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 327 IKDEDDDQLYYTKIYLDKDLRESLKISLDHNSVIFENLN 443
           + D DDD    T    D D RESL  S  H  +I + L+
Sbjct: 32  LSDRDDDDENITVDDDDTDGRESLSPSSAHTVLIPQPLH 70


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -3

Query: 247 STLGYSDASLLSGQQNCSAENSTRVSGNDLNFSN 146
           S +GY    L+ G    S   +   +GN L+++N
Sbjct: 148 SRVGYGSVGLVGGDPASSPGAAAGRTGNSLSWNN 181


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 228 MPVCCLANKTAQPRTAHAYQEMI 160
           MP  C  N  + P  +HA  EM+
Sbjct: 345 MPHRCHGNLQSCPTRSHAVWEMV 367


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 266 QIRISDFNIRIFRCQFAVWPT 204
           ++ +S+++   F C FA W T
Sbjct: 463 RVILSNYDALYFDCGFAGWVT 483


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,648
Number of Sequences: 336
Number of extensions: 2300
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)