Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_E05
(515 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 49 3e-06
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 48 3e-06
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 48 6e-06
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 29 2.3
SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7) 29 2.3
SB_8405| Best HMM Match : PAN (HMM E-Value=0.044) 29 3.0
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41) 28 4.0
SB_4707| Best HMM Match : Toxin_17 (HMM E-Value=8.2) 28 4.0
SB_39949| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0) 27 6.9
SB_28009| Best HMM Match : Zfx_Zfy_act (HMM E-Value=7.3) 27 6.9
SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_56079| Best HMM Match : RnaseH (HMM E-Value=8.1) 27 9.2
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 62.1 bits (144), Expect = 3e-10
Identities = 44/144 (30%), Positives = 66/144 (45%)
Frame = +1
Query: 1 HKLVLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGPYTKVQGLLSYPEICAKLINPNQ 180
+K+ LGI GR++ L + ++ P A +GG+ GPYTK G ++Y EIC
Sbjct: 253 NKIALGIPLYGRSFTLKTANKTLDAP---ATKGGQ-GPYTKEAGYIAYFEIC-------- 300
Query: 181 NGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNLGGVSI 360
+ L DP P WV Y+D + K +Y+K K+L G
Sbjct: 301 ---KMGLSVTRDP-------VLVSPYGVDVNNQWVGYDDVTSVQEKVNYIKKKSLLGAMF 350
Query: 361 MDLSMDDFRGLCTGDKYPILRAAK 432
+ +DDF+G C YP++ A K
Sbjct: 351 WAMDLDDFKGDCGQGSYPLMTAVK 374
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 48.8 bits (111), Expect = 3e-06
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 2/146 (1%)
Frame = +1
Query: 1 HKLVLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGPYTKVQGLLSYPEICAKLINPNQ 180
+K+VLG+ T GR + L+S + G +AG YT +G L+Y EIC + +
Sbjct: 652 NKIVLGLGTYGRAFGLESAG----------NNGLDAGKYTGAKGFLAYFEICKMGLTVVE 701
Query: 181 NGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKN-LGGVS 357
N K Y ++ G WV +++P + K V KN L GV
Sbjct: 702 NNKAK------------APYGYK-------GHDWVGFDNPKSLIYKIDNVVKKNQLRGVM 742
Query: 358 IMDLSMDDFRG-LCTGDKYPILRAAK 432
+ +DDF G C KYP++ A K
Sbjct: 743 FWAIDLDDFSGEHCGQGKYPLMSAVK 768
Score = 47.2 bits (107), Expect = 8e-06
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Frame = +1
Query: 97 GGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGG 276
G +G YT +G L+Y EIC + + H K N P Y ++ G
Sbjct: 277 GVHSGKYTDAEGFLAYYEICKRGLTV------VHKNKANAP------YGYK-------GK 317
Query: 277 FWVSYEDPDTAGNKASYVKTKN-LGGVSIMDLSMDDFRG-LCTGDKYPILRAAK 432
W+ ++DP++ K V KN L GV + +DDF G C KYP++ A K
Sbjct: 318 DWIGFDDPNSLVYKIDNVVKKNQLRGVMFWAIDLDDFSGEHCGQGKYPLMSAVK 371
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 48.4 bits (110), Expect = 3e-06
Identities = 42/145 (28%), Positives = 60/145 (41%), Gaps = 2/145 (1%)
Frame = +1
Query: 4 KLVLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGPYTKVQGLLSYPEICAKLINPNQN 183
K+ LG+ T GR +KL + P A+ G YT+ G L+Y EIC
Sbjct: 367 KIALGLGTYGRAFKLADQTRHGLKAP--ANGNPTRGQYTREPGFLAYYEIC--------- 415
Query: 184 GKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYV-KTKNLGGVSI 360
K+N + A + P G WV Y+D + K V K K + G
Sbjct: 416 -------KMNLQVTSTESSAVKAPYGH-VGDLWVGYDDEYSLSLKVERVIKAKGMAGAMF 467
Query: 361 MDLSMDDFRG-LCTGDKYPILRAAK 432
+ +DDF+G C YP++ A K
Sbjct: 468 WAIPLDDFKGQFCGKGPYPLINAVK 492
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 47.6 bits (108), Expect = 6e-06
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +1
Query: 109 GPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVS 288
GPYT+ G LSY EIC + P + +V P Y + + D + WV
Sbjct: 16 GPYTRESGFLSYYEICDMM--PKMKTMKTDQSEVRAP------YGY-VKQDWAD--VWVG 64
Query: 289 YEDPDTAGNKA-SYVKTKNLGGVSIMDLSMDDFRG-LCTGDKYPILRAAK 432
Y+D + K +K K L G L +DDF G C YP++ A K
Sbjct: 65 YDDERSLQLKVEEVIKAKGLAGAMFWALDLDDFDGSSCGKGNYPLMNAVK 114
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 47.2 bits (107), Expect = 8e-06
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +1
Query: 271 GGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRGLCTGDKYPILRAAKYRL 441
G W++Y+D + G K +K +NL G + +DDF +C +P++ A +Y L
Sbjct: 696 GSQWIAYDDVTSLGRKVELIKKENLLGAMFWAIDLDDFGNVCGQGAHPLMGAVRYML 752
>SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 238 YAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNLGGVSI 360
+ ++ PD +G V+YEDP TA + K+ G SI
Sbjct: 208 WIYKHPDGSSKGECTVTYEDPPTASAAIEWFNGKDFMGQSI 248
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 277 FWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMD 378
F VS+++PD N + VK+K+ ++DLS D
Sbjct: 1796 FEVSFDEPDVITNMKTKVKSKDTVRKDLLDLSSD 1829
>SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7)
Length = 608
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -2
Query: 400 QCKDH-ENHPWKGP*WTHRQGSLFSRN*LCFRPCQDLRKKPRSHLHHXHQEGGRHRSQNV 224
Q + H H W W H + ++R + + R PR H H++ G H +++
Sbjct: 255 QTRTHARRHAW----WEHEKAGTYTRRYIHRKDMAQTRTHPRRHAWREHKKAGTHTRRHM 310
>SB_8405| Best HMM Match : PAN (HMM E-Value=0.044)
Length = 387
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 265 GEGGFWVSYEDPDTAGNKASYVKT 336
G GG+W +D ++ GN+A KT
Sbjct: 320 GTGGYWYGQDDENSCGNEADTSKT 343
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = +1
Query: 70 GVPPIHADEG--GEAGPY-----TKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKR 228
G P EG G++GP + G+ YP + + +P Q G P V D ++
Sbjct: 321 GAPGFSGIEGLKGQSGPLGDPGDNGIDGISGYPGVPGRKGDPGQKGDPPRFVPVPDHGEK 380
Query: 229 FGTYAFRLPDDXGEGG 276
+ P + GE G
Sbjct: 381 GQSGEPGFPGEIGEAG 396
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 74 FHRYTPMRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 208
F RY P+R KL++ ++ TQ P + +++F R
Sbjct: 523 FTRYNPVRYAKLIVFTRYNPVRYTQLMVFTRYNPVRYAQLMVFTR 567
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/57 (21%), Positives = 26/57 (45%)
Frame = +2
Query: 38 RGSSIQTVKFPEFHRYTPMRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 208
R + ++ + F RY P+R +L++ ++ TQ P + +++F R
Sbjct: 180 RYNPVRYTQLMVFTRYNPVRYTQLIVFTRYNPVRYTQLIVFTRYNPVRYTQLIVFTR 236
>SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41)
Length = 1017
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 324 TSFVSGRVRIFVRNPEATFTXIIRKAEGI 238
T + GR +IF+RNP F ++ +G+
Sbjct: 640 TEYAYGRTKIFIRNPRTLFALEEKRKDGM 668
>SB_4707| Best HMM Match : Toxin_17 (HMM E-Value=8.2)
Length = 121
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 363 HDGHTAKVLCFHVTSFVSGRVRIFVRN 283
HDG + +CFH S +R+ V+N
Sbjct: 72 HDGIVPRTICFHKLSCCDDPIRVVVKN 98
>SB_39949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 231 KTFARIVDLTKMRTLSVLVGVNKFGANFWVA 139
K FAR++ T +R + VL+ + FG + W A
Sbjct: 17 KQFARLLIKTPVRIVVVLLSLGLFGVSIWEA 47
>SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 915
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 25 TTGRTWKLDSDSEISGVPPIHADEGGEAGPYT-KVQGLLSYPEI 153
T G+TW E G+P + A GG A P + + +LS +I
Sbjct: 119 TAGKTWNASCFCEGRGMPLVGAVIGGAASPISLNIANVLSVNDI 162
>SB_28009| Best HMM Match : Zfx_Zfy_act (HMM E-Value=7.3)
Length = 677
Score = 27.5 bits (58), Expect = 6.9
Identities = 23/100 (23%), Positives = 41/100 (41%)
Frame = +1
Query: 91 DEGGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGE 270
D GE Y + S+ E ++ + +G++ + D TY L D GE
Sbjct: 146 DSHGEKATYILLDD--SHAEKATYILLGDSHGEKATYILLGDSHAEKATYIL-LDDSHGE 202
Query: 271 GGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRG 390
++ +D + G KA+Y+ + G + +DD G
Sbjct: 203 KATYILLDD--SHGEKATYILLDDSHGEKATYILLDDSHG 240
Score = 27.1 bits (57), Expect = 9.2
Identities = 23/100 (23%), Positives = 42/100 (42%)
Frame = +1
Query: 91 DEGGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGE 270
D GE Y + S+ E ++ + +G++ ++D TY L D GE
Sbjct: 172 DSHGEKATYILLGD--SHAEKATYILLDDSHGEKATYILLDDSHGEKATYIL-LDDSHGE 228
Query: 271 GGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRG 390
++ +D + G KA+Y+ + G + +DD G
Sbjct: 229 KATYILLDD--SHGEKATYILLDDSHGEKATYILLDDSHG 266
>SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2250
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 271 GGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRGLCTGDKYPILRAAK 432
GG WV + GN+ + T + G V I S + G Y I+R K
Sbjct: 1217 GGSWVDVDQDAYCGNRTRFNVTSSCGWVRIRFKSDESITGRGFNATYRIIRDRK 1270
>SB_56079| Best HMM Match : RnaseH (HMM E-Value=8.1)
Length = 264
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 450 KSLKSVFCGPQDRIFISSAKTTKIIHGKVHDGH 352
KS KSV G + +IF + +I+H H H
Sbjct: 24 KSFKSVVAGNKVKIFSDNQNVVRIVHNGSHVPH 56
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,092,361
Number of Sequences: 59808
Number of extensions: 377349
Number of successful extensions: 889
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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