Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_D24
(310 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 0.28
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 0.28
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 22 1.9
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 2.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 2.6
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 21 4.5
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 20 5.9
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 20 5.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 20 5.9
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 20 5.9
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 20 7.8
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 20 7.8
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.6 bits (51), Expect = 0.28
Identities = 8/44 (18%), Positives = 24/44 (54%)
Frame = +3
Query: 75 FIAVLFFTLN*LSWVCLQETLKMERKFSCKDVHNATLWRQVVNT 206
+ + + +N W + ++KM+R+F ++ +++++ V T
Sbjct: 1531 YFTIQYRPINEFHWTLVSNSVKMQRRFVVTNLQPSSVYQLKVET 1574
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.6 bits (51), Expect = 0.28
Identities = 8/44 (18%), Positives = 24/44 (54%)
Frame = +3
Query: 75 FIAVLFFTLN*LSWVCLQETLKMERKFSCKDVHNATLWRQVVNT 206
+ + + +N W + ++KM+R+F ++ +++++ V T
Sbjct: 1527 YFTIQYRPINEFHWTLVSNSVKMQRRFVVTNLQPSSVYQLKVET 1570
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.8 bits (44), Expect = 1.9
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 86 NCNKIPGHRNFSDRDSETAVNSHTTND 6
N NK G+R +R ++ N + ND
Sbjct: 451 NANKQNGNRQNDNRQNDNKQNGNRQND 477
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 2.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 247 WTGPWIFLLGCQQS*RYY 300
WT P IF C+ RY+
Sbjct: 135 WTPPAIFKSSCEIDVRYF 152
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 2.6
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = +1
Query: 244 DWTGPWIFL 270
+W+GPWI +
Sbjct: 59 EWSGPWILV 67
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 20.6 bits (41), Expect = 4.5
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 200 KHKVGPNLHGFYGRKTGQAPGFSYSDANKA 289
KH + +L +G K + SYS NK+
Sbjct: 1 KHHLEYHLRNHFGSKPFKCEKCSYSCVNKS 30
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 20.2 bits (40), Expect = 5.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 266 KIQGPVQSCDHRIHVDLALPCV 201
K+ PVQ+ ++HV+ L V
Sbjct: 40 KLIRPVQNMTEKVHVNFGLAFV 61
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.2 bits (40), Expect = 5.9
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = -1
Query: 211 YLVFTTCLHSVALCTSL 161
YL+F L S+++C ++
Sbjct: 310 YLIFAMILVSISICVTV 326
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.2 bits (40), Expect = 5.9
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = -1
Query: 211 YLVFTTCLHSVALCTSL 161
YL+F L S+++C ++
Sbjct: 310 YLIFAMILVSISICVTV 326
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 20.2 bits (40), Expect = 5.9
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -1
Query: 268 RKSRGLSSLATIESM*IWPYLVFTTCLHSVALCTSL 161
++ + +LA + + + +L F TC A+CT L
Sbjct: 613 KERKATKTLAIVLGVFLICWLPFFTCNIMDAICTKL 648
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 19.8 bits (39), Expect = 7.8
Identities = 5/6 (83%), Positives = 6/6 (100%)
Frame = -2
Query: 177 HCAHLC 160
HC+HLC
Sbjct: 42 HCSHLC 47
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 19.8 bits (39), Expect = 7.8
Identities = 5/6 (83%), Positives = 6/6 (100%)
Frame = -2
Query: 177 HCAHLC 160
HC+HLC
Sbjct: 42 HCSHLC 47
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,389
Number of Sequences: 438
Number of extensions: 2315
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6471036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -