Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_D23
         (487 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   5.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.9  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 183 RRISRWSTWLSQTPG 139
           R  + W  W SQ PG
Sbjct: 566 RTAAIWPLWCSQNPG 580


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 66  CSVGNNLKVNNNLAIILDIAT*FI 137
           CS+  NLK+  ++A I   A+ F+
Sbjct: 209 CSINENLKMGLDIASITAQASSFV 232


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 66  CSVGNNLKVNNNLAIILDIAT*FI 137
           CS+  NLK+  ++A I   A+ F+
Sbjct: 209 CSINENLKMGLDIASITAQASSFV 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,031
Number of Sequences: 336
Number of extensions: 2306
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)