Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_D23
(487 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0155 - 17321982-17322214,17323550-17323590,17323831-173238... 66 2e-11
06_01_0411 + 2939148-2939354,2939517-2939578,2939712-2939752,294... 62 2e-10
12_01_0791 + 7234021-7234221,7234801-7234862,7235441-7235481,723... 62 2e-10
01_01_0831 + 6493897-6494100,6494195-6494256,6498047-6498087,649... 62 3e-10
04_03_0855 - 20328695-20328912,20329128-20329168,20329782-203298... 60 7e-10
06_01_0409 + 2926072-2926275,2926423-2926484,2926598-2926638,292... 58 3e-09
11_01_0326 - 2435918-2436135,2436232-2436272,2436486-2436547,243... 58 4e-09
11_03_0139 + 10632020-10632211,10632876-10632937,10633141-106331... 57 7e-09
02_04_0085 - 19587026-19587243,19587509-19587549,19587811-195878... 57 7e-09
12_01_0332 - 2564541-2564758,2564847-2564887,2565138-2565199,256... 57 9e-09
02_02_0177 + 7484526-7484723,7484913-7484974,7485606-7485646,748... 50 1e-06
06_03_0423 - 20624149-20624375,20625581-20625621,20625709-206257... 49 2e-06
05_06_0093 - 25468271-25468320,25468393-25468433,25468592-254686... 49 2e-06
01_01_0723 + 5651593-5651751,5651896-5651957,5652130-5652170,565... 48 4e-06
09_04_0714 - 19685374-19685430,19685606-19685669,19686117-196862... 41 5e-04
01_06_0704 + 31336622-31336825,31336948-31337009,31337040-313371... 38 0.003
05_05_0167 - 22868506-22868580,22868693-22869103 37 0.010
02_02_0586 - 11861509-11861637,11863651-11863815,11864738-118648... 30 1.1
02_02_0590 - 11894721-11895188,11895684-11895851 28 3.5
04_03_0121 + 11506644-11508107 27 6.0
05_07_0049 - 27327804-27328400 27 8.0
>06_03_0155 -
17321982-17322214,17323550-17323590,17323831-17323892,
17324051-17324245
Length = 176
Score = 65.7 bits (153), Expect = 2e-11
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +3
Query: 261 EVNEGNELTPTQVKDIPSVSWEAASDQFYTLAMTDPDAPSRADPKFREWHHWLVANVP-G 437
++ G E+ P+ P+V ++ + L MTDPDAPS ++P REW HWLV N+P G
Sbjct: 35 DLTNGCEIKPSVAAAPPAVQIAGRVNELFALVMTDPDAPSPSEPTMREWLHWLVVNIPGG 94
Query: 438 NNVAAGETLSEYVG 479
+ + G+ + Y+G
Sbjct: 95 TDPSQGDVVVPYMG 108
>06_01_0411 +
2939148-2939354,2939517-2939578,2939712-2939752,
2941060-2941289
Length = 179
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 264 VNEGNELTPTQVKDIPSVSWEAASDQ--FYTLAMTDPDAPSRADPKFREWHHWLVANVPG 437
V+ G EL P+ V P V +D FYTL M DPDAPS +DP RE+ HWLV ++PG
Sbjct: 39 VSNGCELKPSMVTHQPRVE-VGGNDMRTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPG 97
Query: 438 NNVAA 452
A+
Sbjct: 98 TTAAS 102
>12_01_0791 +
7234021-7234221,7234801-7234862,7235441-7235481,
7235711-7235940
Length = 177
Score = 62.1 bits (144), Expect = 2e-10
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +3
Query: 261 EVNEGNELTPTQVKDIPSVSWEAASD--QFYTLAMTDPDAPSRADPKFREWHHWLVANVP 434
E+ G+EL P+QV P+V D YTL M DPDAPS ++P RE+ HWLV +VP
Sbjct: 35 EMTSGSELRPSQVAGEPAVQITGGRDGRALYTLVMVDPDAPSPSNPSKREYLHWLVTDVP 94
Query: 435 -GNNVAAGETLSEY 473
G + + G + Y
Sbjct: 95 EGGDTSKGTEVVAY 108
>01_01_0831 +
6493897-6494100,6494195-6494256,6498047-6498087,
6498218-6498441
Length = 176
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 261 EVNEGNELTPTQVKDIPSVSWEAASDQ-FYTLAMTDPDAPSRADPKFREWHHWLVANVP 434
EV G EL P+ V D P V+ + FYTL M DPDAPS +DP RE+ HWLV ++P
Sbjct: 37 EVANGCELRPSAVADQPRVAVGGPDMRTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIP 95
>04_03_0855 -
20328695-20328912,20329128-20329168,20329782-20329843,
20330023-20330223
Length = 173
Score = 60.5 bits (140), Expect = 7e-10
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 246 YPSGVEVNEGNELTPTQVKDIPSVSWEAAS-DQFYTLAMTDPDAPSRADPKFREWHHWLV 422
Y S +V G+EL P+ V P V + F+TL MTDPD P +DP RE HW+V
Sbjct: 31 YSSNKQVFNGHELFPSAVVSKPRVEVQGGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIV 90
Query: 423 ANVPGNNVAA 452
++PG A+
Sbjct: 91 TDIPGTTDAS 100
>06_01_0409 +
2926072-2926275,2926423-2926484,2926598-2926638,
2927165-2927394
Length = 178
Score = 58.4 bits (135), Expect = 3e-09
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = +3
Query: 264 VNEGNELTPTQVKDIPSVSWEAASDQ--FYTLAMTDPDAPSRADPKFREWHHWLVANVPG 437
V+ G EL P+ V P V +D FYTL M DPDAPS ++P RE+ HWLV ++PG
Sbjct: 38 VSNGCELKPSMVTQQPRVV-VGGNDMRTFYTLVMVDPDAPSPSNPNLREYLHWLVTDIPG 96
Query: 438 NNVA 449
A
Sbjct: 97 TTGA 100
>11_01_0326 -
2435918-2436135,2436232-2436272,2436486-2436547,
2436620-2436820
Length = 173
Score = 58.0 bits (134), Expect = 4e-09
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 246 YPSGVEVNEGNELTPTQVKDIPSVSWEAAS-DQFYTLAMTDPDAPSRADPKFREWHHWLV 422
Y S V G+EL P+ V P V + F+TL MTDPD P +DP RE HW+V
Sbjct: 31 YNSNKLVFNGHELYPSAVVSKPRVEVQGGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIV 90
Query: 423 ANVPGNNVAA 452
++PG A+
Sbjct: 91 TDIPGTTDAS 100
>11_03_0139 +
10632020-10632211,10632876-10632937,10633141-10633181,
10633667-10633883,10634229-10634271
Length = 184
Score = 57.2 bits (132), Expect = 7e-09
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +3
Query: 261 EVNEGNELTPTQVKDIPSVSWEAASDQ-FYTLAMTDPDAPSRADPKFREWHHWLVANVP 434
E+ G+EL P+QV + P + E + YTL M DPDAPS ++P RE+ HW+V ++P
Sbjct: 33 EMTNGSELKPSQVLNQPRIYIEGRDMRTLYTLVMVDPDAPSPSNPTKREYLHWMVTDIP 91
>02_04_0085 -
19587026-19587243,19587509-19587549,19587811-19587872,
19587990-19588190
Length = 173
Score = 57.2 bits (132), Expect = 7e-09
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 246 YPSGVEVNEGNELTPTQVKDIPSVSWEAAS-DQFYTLAMTDPDAPSRADPKFREWHHWLV 422
Y + +V G+E P+ V P V + F+TL MTDPD P +DP RE HW+V
Sbjct: 31 YGANKQVFNGHEFFPSAVAGKPRVEVQGGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIV 90
Query: 423 ANVPGNNVAA 452
++PG A+
Sbjct: 91 TDIPGTTDAS 100
>12_01_0332 -
2564541-2564758,2564847-2564887,2565138-2565199,
2565305-2565505
Length = 173
Score = 56.8 bits (131), Expect = 9e-09
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 246 YPSGVEVNEGNELTPTQVKDIPSVSWEAASDQ-FYTLAMTDPDAPSRADPKFREWHHWLV 422
Y S V G+E P+ V P V + + F+TL MTDPD P +DP RE HW+V
Sbjct: 31 YNSNKLVFNGHEFYPSAVVSKPRVEVQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIV 90
Query: 423 ANVPGNNVAA-GETLSEY 473
++PG A+ G + Y
Sbjct: 91 TDIPGTTDASFGREIISY 108
>02_02_0177 +
7484526-7484723,7484913-7484974,7485606-7485646,
7485845-7486101
Length = 185
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +3
Query: 255 GVEVNEGNELTPTQVKDIPSVSWEAASDQF---YTLAMTDPDAPSRADPKFREWHHWLVA 425
G+ V G EL V + P V E D YTL M DPDAP+ ++P RE+ HW+V
Sbjct: 33 GMPVISGVELRAPAVAEKPVV--EVGGDDLRVAYTLVMVDPDAPNPSNPTLREYLHWMVT 90
Query: 426 NVPGNNVA 449
++P + A
Sbjct: 91 DIPASTDA 98
>06_03_0423 -
20624149-20624375,20625581-20625621,20625709-20625770,
20626147-20626338
Length = 173
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +3
Query: 255 GVEVNEGNELTPTQVKDIPSVSWEAASDQF---YTLAMTDPDAPSRADPKFREWHHWLVA 425
G V G E + V P V E D F YTL M DPDAP+ ++P RE+ HW+V
Sbjct: 31 GRPVFNGKEFRSSAVSMKPRV--EIGGDDFRFAYTLVMVDPDAPNPSNPTLREYLHWMVT 88
Query: 426 NVPGN 440
++P +
Sbjct: 89 DIPSS 93
>05_06_0093 -
25468271-25468320,25468393-25468433,25468592-25468653,
25468872-25469057
Length = 112
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 273 GNELTPTQVKDIPSVSWEAASDQF-YTLAMTDPDAPSRADPKFREWHHWLVANVP 434
G L P+ V P V + YTL + DPDAPS +DP RE+ HW+V ++P
Sbjct: 35 GAALKPSAVVSKPQVDVGGNDMRVSYTLVLVDPDAPSPSDPSLREYLHWMVTDIP 89
>01_01_0723 +
5651593-5651751,5651896-5651957,5652130-5652170,
5654105-5654352
Length = 169
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/66 (39%), Positives = 35/66 (53%)
Frame = +3
Query: 252 SGVEVNEGNELTPTQVKDIPSVSWEAASDQFYTLAMTDPDAPSRADPKFREWHHWLVANV 431
+GV V G +L P+ V PSV M DPDAP+ ++P RE+ HWLV ++
Sbjct: 31 NGVRVVNGEDLRPSAVSARPSVE-----------VMVDPDAPNPSNPTLREYLHWLVTDI 79
Query: 432 PGNNVA 449
PG A
Sbjct: 80 PGTTDA 85
>09_04_0714 -
19685374-19685430,19685606-19685669,19686117-19686256,
19687916-19687969,19688407-19688451,19689480-19689517,
19689713-19689831,19689955-19690016,19691038-19691157
Length = 232
Score = 41.1 bits (92), Expect = 5e-04
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 261 EVNEGNELTPTQVKDIPSVSWEAASD-QFYTLAMTDPDAPSRADPKFREWHH 413
E+ G + + V P V E + YTL M DPDAPS + P++RE+ H
Sbjct: 9 EITNGTGVRSSAVFTAPHVEIEGRDQTKLYTLVMVDPDAPSPSKPEYREYLH 60
>01_06_0704 +
31336622-31336825,31336948-31337009,31337040-31337171,
31337304-31337341,31337825-31337872,31338545-31338780
Length = 239
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 273 GNELTPTQVKDIPSVSWEAASDQ-FYTLAMTDPDAPSRADPKFREWHHWL 419
G EL P+ P V + FYTL + DPDAPS ++P E+ H+L
Sbjct: 41 GAELKPSATVHKPRVDIGGTDLRVFYTLVLVDPDAPSPSNPSLGEYLHYL 90
>05_05_0167 - 22868506-22868580,22868693-22869103
Length = 161
Score = 36.7 bits (81), Expect = 0.010
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 300 KDI-PSVSWEAASDQFYTLAMT--DPDAPSRADPKFREWHHWLVANVP 434
KDI P V W D +LA+ D DAP P W HW+VAN+P
Sbjct: 33 KDISPPVEWYGVPDGTRSLALVVHDVDAPDPDGP-IVPWTHWVVANIP 79
>02_02_0586 -
11861509-11861637,11863651-11863815,11864738-11864846,
11864971-11865065,11865169-11865702,11866299-11866499,
11867826-11868090,11868111-11868736
Length = 707
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +3
Query: 276 NELTPTQVKDIPSVSWEAASDQFYTLAMTDPDAPSRADPKFREWHHWLVANVP 434
+E + V + + + AA D+ T A AP R D W WL+ NVP
Sbjct: 100 DESSAAAVAEAEATAAAAAVDEEETPAPAPQPAPRREDELVDGWPTWLLDNVP 152
>02_02_0590 - 11894721-11895188,11895684-11895851
Length = 211
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 249 PSGVEVNEGNELTPTQVKDIPSVSWEAASDQFYTL 353
P ++V GN+LTPT V + P ++ D + +
Sbjct: 74 PINLQVEHGNDLTPTSVSEKPGNNYLPCLDTLFIM 108
>04_03_0121 + 11506644-11508107
Length = 487
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 276 NELTPTQVKDIPSVSWEAASDQFYTLAMTDPD 371
N + + +P + W A DQ+Y M D +
Sbjct: 375 NSVLESMTHGVPIIGWPLAGDQYYNAKMLDEE 406
>05_07_0049 - 27327804-27328400
Length = 198
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 345 YTLAMTDPDAPSRADPKFREWHHWLVANVPGNNVAAGETLS 467
Y + DP APSR P R W LV +V +A LS
Sbjct: 43 YDASTFDPTAPSRPPPSDRVWR--LVEDVSSLTLAESAALS 81
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,540,208
Number of Sequences: 37544
Number of extensions: 270140
Number of successful extensions: 702
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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