Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_D22
         (269 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0LR92 Cluster: G5 domain protein; n=1; Acidothermus ce...    32   2.9  
UniRef50_Q5ABW3 Cluster: Putative uncharacterized protein; n=1; ...    32   2.9  
UniRef50_Q92GD5 Cluster: Putative uncharacterized protein; n=4; ...    31   5.0  
UniRef50_Q2GDD1 Cluster: Putative ubiquinone biosynthesis protei...    31   5.0  

>UniRef50_A0LR92 Cluster: G5 domain protein; n=1; Acidothermus
           cellulolyticus 11B|Rep: G5 domain protein - Acidothermus
           cellulolyticus (strain ATCC 43068 / 11B)
          Length = 409

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = -2

Query: 265 PQNVCYALSSIINLNLNTIAKLFHTNATKIT*YRVKYTSFNELKKTIAKCQTEIPPKTPK 86
           P N      S + +    +++L H N   +  YRV Y +  E  K +   Q  +PP TP+
Sbjct: 253 PYNTVTTYDSSLYVGTRKVSQLGH-NGVLVRTYRVTYANGTERSKQLLSSQVSVPP-TPQ 310

Query: 85  LLI 77
           +++
Sbjct: 311 VVL 313


>UniRef50_Q5ABW3 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 466

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = -2

Query: 256 VCYALSSIINLNLNTIAKLFHTNATKIT*YRVKYTSFNELKKTIAKCQTEIPP 98
           VC+      NLN+    K  +      T + V+Y   NEL +T+ K QT  PP
Sbjct: 158 VCWLAPGDYNLNIALAVK--NGQGLGTTKFEVRYQELNELGETLIKSQTFYPP 208


>UniRef50_Q92GD5 Cluster: Putative uncharacterized protein; n=4;
           Rickettsia|Rep: Putative uncharacterized protein -
           Rickettsia conorii
          Length = 365

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -2

Query: 220 LNTIAKLFHTNATKIT*-YRVKYTSFNELKKTIAKCQTEIPPK--TPK 86
           LN   K+ H N  KIT  ++  +T  NEL KTI     ++  K  TPK
Sbjct: 169 LNQAYKVLHKNHKKITEEHKQAHTELNELNKTITNLSQQLQKKGLTPK 216


>UniRef50_Q2GDD1 Cluster: Putative ubiquinone biosynthesis protein;
           n=1; Neorickettsia sennetsu str. Miyayama|Rep: Putative
           ubiquinone biosynthesis protein - Neorickettsia sennetsu
           (strain Miyayama)
          Length = 458

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = -2

Query: 259 NVCYALSSII--NLNLNTIAKLFHTNATKIT*YRVKYTSFNELKKTIAKCQTEIPPKTPK 86
           ++ Y LS  +    NL TI K F  +       +++  + +E+K  +   +T + P+   
Sbjct: 143 SIVYILSFFLPKRFNLITILKKFSASTKNELDLKMEAAALSEMKDKLLTNKTVVIPEVYW 202

Query: 85  LLITTSI*TLNWLE 44
            L T  I T++WLE
Sbjct: 203 GLTTNEILTMSWLE 216


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,690,076
Number of Sequences: 1657284
Number of extensions: 2960131
Number of successful extensions: 6265
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6265
length of database: 575,637,011
effective HSP length: 67
effective length of database: 464,598,983
effective search space used: 10221177626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)