Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_D22
(269 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical ... 29 0.60
Z92782-9|CAE17814.1| 329|Caenorhabditis elegans Hypothetical pr... 27 1.4
Z81491-17|CAO82030.1| 959|Caenorhabditis elegans Hypothetical p... 27 1.8
Z81092-2|CAB03145.3| 959|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p... 26 3.2
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical... 26 3.2
Z81050-10|CAB02860.1| 329|Caenorhabditis elegans Hypothetical p... 26 4.2
U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical p... 25 5.6
AF099917-3|AAC68781.1| 310|Caenorhabditis elegans Hypothetical ... 25 5.6
AF016449-6|AAG23999.1| 331|Caenorhabditis elegans Seven tm rece... 25 5.6
AC006804-2|AAL32253.2| 372|Caenorhabditis elegans Hypothetical ... 25 5.6
AC006708-26|AAF60419.1| 1724|Caenorhabditis elegans Holocentric ... 25 5.6
AC006708-25|AAK68883.1| 1758|Caenorhabditis elegans Holocentric ... 25 5.6
Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z69637-4|CAA93469.1| 539|Caenorhabditis elegans Hypothetical pr... 25 9.7
S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein. 25 9.7
M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protei... 25 9.7
AC006608-2|AAF39756.1| 1147|Caenorhabditis elegans Transformer :... 25 9.7
AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer :... 25 9.7
>AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical
protein Y67H2A.1 protein.
Length = 707
Score = 28.7 bits (61), Expect = 0.60
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 166 RVKYTSFNELKKTIAKCQTEIPPKTPKLLITTS 68
RV YT + C EIPP TP++LIT S
Sbjct: 174 RVLYTGDFSCLEDRHLCAAEIPPITPQVLITES 206
>Z92782-9|CAE17814.1| 329|Caenorhabditis elegans Hypothetical
protein F14F8.12 protein.
Length = 329
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 120 LAIVFFNSLKLVYLTLYHVILVAFV*NSLAIVFKFKFIIEDNA*HTF 260
L I+ F L ++ T + ++ + V NSL +F F F+ + H +
Sbjct: 78 LFIILFYILHILQQTFHVILFLLAVFNSLKYIFSFHFMNSQTSIHKY 124
>Z81491-17|CAO82030.1| 959|Caenorhabditis elegans Hypothetical
protein F58D12.3 protein.
Length = 959
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 226 LNLNTIAKLFHTNATKIT*YRVKYTSFNELKKTIAKCQTEIPPKTPKLL 80
LNLN +A L H N TK +S + +K KC + PK+L
Sbjct: 694 LNLN-VAYLHHENTTKNIGIEAATSSLPQNEKYTIKCLDGVTVTAPKVL 741
>Z81092-2|CAB03145.3| 959|Caenorhabditis elegans Hypothetical
protein F58D12.3 protein.
Length = 959
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 226 LNLNTIAKLFHTNATKIT*YRVKYTSFNELKKTIAKCQTEIPPKTPKLL 80
LNLN +A L H N TK +S + +K KC + PK+L
Sbjct: 694 LNLN-VAYLHHENTTKNIGIEAATSSLPQNEKYTIKCLDGVTVTAPKVL 741
>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 8 SVYIAKGVSMSNFKPVECLNTCGDK*LRS 94
S+ IAK +K +E L TCGDK +RS
Sbjct: 1145 SLKIAKCNMQKVWKVLEKLKTCGDKSMRS 1173
>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 8 SVYIAKGVSMSNFKPVECLNTCGDK*LRS 94
S+ IAK +K +E L TCGDK +RS
Sbjct: 1145 SLKIAKCNMQKVWKVLEKLKTCGDKSMRS 1173
>Z81050-10|CAB02860.1| 329|Caenorhabditis elegans Hypothetical
protein C50B6.12 protein.
Length = 329
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 120 LAIVFFNSLKLVYLTLYHVILVAFV*NSLAIVFKFKFIIED 242
L FF + L+YLTL+++ + + + + F F II D
Sbjct: 13 LFTAFFVNSFLIYLTLFYITCIRGIYKYMIVWFAFGCIIFD 53
>U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical
protein C56C10.12 protein.
Length = 1599
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -2
Query: 250 YALSSIINLNLNTIAKLFHTNATKIT*YRVKYTSFNELKKTIAKCQTEIP 101
Y + + + NT F TK + KYT N +KK +KC +P
Sbjct: 1123 YVMLRVEQKSFNTFYGHFFETLTK----KDKYTLDNAVKKASSKCSITVP 1168
>AF099917-3|AAC68781.1| 310|Caenorhabditis elegans Hypothetical
protein F54D10.3 protein.
Length = 310
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 105 SRQKLLSYLSPQVFKHSTGLKFDIDTPF 22
S K LS L PQV ST K ++ PF
Sbjct: 162 SAMKYLSSLIPQVSSTSTPTKVKLENPF 189
>AF016449-6|AAG23999.1| 331|Caenorhabditis elegans Seven tm
receptor protein 40 protein.
Length = 331
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 138 NSLKLVYLTLYHVILVAFV*NSLAIVFKF 224
++L L+Y+TL+HV + + I+F F
Sbjct: 22 SNLLLIYITLFHVKQIVGTYKYMIIIFSF 50
>AC006804-2|AAL32253.2| 372|Caenorhabditis elegans Hypothetical
protein Y53G8B.3 protein.
Length = 372
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 129 VFFNSLKLVYLTLYHVILVAF 191
V+ N +LV LTL V+LVAF
Sbjct: 287 VYHNGTRLVKLTLAPVVLVAF 307
>AC006708-26|AAF60419.1| 1724|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 6, isoform a protein.
Length = 1724
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 117 VRLRSRQKLLSYLSPQVFKHSTGLKFDIDTPFAM*TL 7
+ + S ++ L +L+ Q+F F IDTP M TL
Sbjct: 204 IAVDSAERYLHHLTTQLFAFLHSNTFSIDTPTLMSTL 240
>AC006708-25|AAK68883.1| 1758|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 6, isoform b protein.
Length = 1758
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 117 VRLRSRQKLLSYLSPQVFKHSTGLKFDIDTPFAM*TL 7
+ + S ++ L +L+ Q+F F IDTP M TL
Sbjct: 204 IAVDSAERYLHHLTTQLFAFLHSNTFSIDTPTLMSTL 240
>Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +2
Query: 110 SLTFSNCFL*--FIKTCVLDSISCNLSGV 190
SL F N ++ F+KT VL + CNL G+
Sbjct: 899 SLLFVNLYMAEVFVKTMVLCVVLCNLHGL 927
>Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +2
Query: 110 SLTFSNCFL*--FIKTCVLDSISCNLSGV 190
SL F N ++ F+KT VL + CNL G+
Sbjct: 899 SLLFVNLYMAEVFVKTMVLCVVLCNLHGL 927
>Z69637-4|CAA93469.1| 539|Caenorhabditis elegans Hypothetical
protein F35G2.4 protein.
Length = 539
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 166 RVKYTSFNELKKTIAKCQTEIPPKTPK 86
RV+Y E A C+ EIPP PK
Sbjct: 269 RVEYDGIVERDAYEALCRGEIPPVEPK 295
>S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein.
Length = 1475
Score = 24.6 bits (51), Expect = 9.7
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 229 NLNLNTIAKLFHT-NATKIT*YRVKYTSFNELKKTIAKCQTEIPPKTPKLLIT 74
N+ T K+FH N+T I + SF+ K QTEI TP++L++
Sbjct: 325 NVVNQTCDKIFHDLNSTGIEFFDGS-RSFSSTKSQFDTMQTEIVLLTPEMLLS 376
>M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protein
protein.
Length = 1475
Score = 24.6 bits (51), Expect = 9.7
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 229 NLNLNTIAKLFHT-NATKIT*YRVKYTSFNELKKTIAKCQTEIPPKTPKLLIT 74
N+ T K+FH N+T I + SF+ K QTEI TP++L++
Sbjct: 325 NVVNQTCDKIFHDLNSTGIEFFDGS-RSFSSTKSQFDTMQTEIVLLTPEMLLS 376
>AC006608-2|AAF39756.1| 1147|Caenorhabditis elegans Transformer : xx
animals transformedinto males protein 2, isoform b
protein.
Length = 1147
Score = 24.6 bits (51), Expect = 9.7
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 229 NLNLNTIAKLFHT-NATKIT*YRVKYTSFNELKKTIAKCQTEIPPKTPKLLIT 74
N+ T K+FH N+T I + SF+ K QTEI TP++L++
Sbjct: 325 NVVNQTCDKIFHDLNSTGIEFFDGS-RSFSSTKSQFDTMQTEIVLLTPEMLLS 376
>AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer : xx
animals transformedinto males protein 2, isoform a
protein.
Length = 1475
Score = 24.6 bits (51), Expect = 9.7
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 229 NLNLNTIAKLFHT-NATKIT*YRVKYTSFNELKKTIAKCQTEIPPKTPKLLIT 74
N+ T K+FH N+T I + SF+ K QTEI TP++L++
Sbjct: 325 NVVNQTCDKIFHDLNSTGIEFFDGS-RSFSSTKSQFDTMQTEIVLLTPEMLLS 376
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,084,162
Number of Sequences: 27780
Number of extensions: 79891
Number of successful extensions: 206
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 12,740,198
effective HSP length: 68
effective length of database: 10,851,158
effective search space used: 227874318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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