Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_D21
(552 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 2e-37
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 50 2e-06
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 49 3e-06
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 49 3e-06
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 48 5e-06
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 48 7e-06
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 46 2e-05
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 44 8e-05
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 43 1e-04
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 43 2e-04
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 42 3e-04
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 41 6e-04
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 41 6e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 41 8e-04
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 38 0.005
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.005
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.038
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 34 0.067
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 34 0.089
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 33 0.12
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 33 0.12
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 33 0.16
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 33 0.21
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.27
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.27
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.27
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.47
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 31 0.47
SB_4293| Best HMM Match : TFIID-18kDa (HMM E-Value=0) 31 0.63
SB_1394| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63
SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63
SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9) 31 0.63
SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) 31 0.83
SB_26219| Best HMM Match : MANEC (HMM E-Value=0.12) 30 1.1
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 30 1.1
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 30 1.4
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 30 1.4
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 29 2.5
SB_6969| Best HMM Match : Astacin (HMM E-Value=0) 29 3.3
SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_36609| Best HMM Match : Ion_trans_2 (HMM E-Value=1.7e-13) 28 4.4
SB_30502| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0) 28 4.4
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 28 4.4
SB_2409| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_23494| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_7103| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 28 5.8
SB_9336| Best HMM Match : Taeniidae_ag (HMM E-Value=0.9) 28 5.8
SB_6063| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38) 27 7.7
SB_19076| Best HMM Match : HECT (HMM E-Value=0) 27 7.7
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 152 bits (368), Expect = 2e-37
Identities = 86/186 (46%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Frame = +1
Query: 1 PTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLA 180
PTQALNFAFKD+ K +F + F SL FVY LD+ RTRLA
Sbjct: 85 PTQALNFAFKDQVKALFKPKKTDSNAI--KFSKNIASGGAAGAMSLFFVYSLDYCRTRLA 142
Query: 181 AD--VGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARG 354
D VGK G+R+F G+ + K SDGL GLYRGF +S GII+YR YFG YDT +
Sbjct: 143 NDAKVGKKGGERQFNGMIDVYKKTIASDGLVGLYRGFVISCVGIIVYRGFYFGLYDTLKP 202
Query: 355 MLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYENTIHCWAT 534
+L ++ +VIS+ + VT AG+ SYP DT+RRRMMM SG A + Y+ +I C
Sbjct: 203 ILLG-EDAGVVISFVLGYGVTVSAGLASYPIDTIRRRMMMTSGEA---VKYKGSIDCTIQ 258
Query: 535 IAKTEG 552
I K EG
Sbjct: 259 ILKKEG 264
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 50.4 bits (115), Expect = 1e-06
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Frame = +1
Query: 145 VYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAA 324
+YPL+ +TRLA + GQ + GL + S I++ +G+ YRG S+ GII Y
Sbjct: 248 IYPLEVLKTRLAI---RKTGQ--YRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGI 302
Query: 325 YFGFYDTARGM-LPDPKNTP----IVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRA 489
Y+T + L KN +++ A +T + SYP VR R+ Q+ R
Sbjct: 303 DLAVYETLKNFYLNYHKNQSADPGVLVLLACGTASSTCGQLASYPLSLVRTRLQAQA-RE 361
Query: 490 KSDILYENTIHCWATIAKTEG 552
K +N + I +G
Sbjct: 362 KGGGQGDNMVSVLRKIITEDG 382
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 148 YPLDFARTRLAADVG-KGDGQREFTGLGNCISKIFKSDGLTGLYRG 282
YPL RTRL A KG GQ + + + + KI DG GLYRG
Sbjct: 346 YPLSLVRTRLQAQAREKGGGQGD--NMVSVLRKIITEDGFKGLYRG 389
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 49.6 bits (113), Expect = 2e-06
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 13/154 (8%)
Frame = +1
Query: 130 TSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGII 309
T+ YPLD R+RLA V + G T CIS K G LY+GF ++ I+
Sbjct: 77 TACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS--VKEGGPKALYKGFVPTLLTIV 134
Query: 310 IYRAAYFGFYDTARGMLPDPK----NT---------PIVISWAIAQTVTTVAGIISYPFD 450
F ++T + + + NT I+ + V+ I+YP D
Sbjct: 135 PAMGIGFYMFETMKAYFLETRIAFTNTNPDTLCPELSIIGGFVCGGVAGAVSQTIAYPLD 194
Query: 451 TVRRRMMMQSGRAKSDILYENTIHCWATIAKTEG 552
VRRRM + +G Y I+ + K +G
Sbjct: 195 VVRRRMQL-AGAVPDGHKYNTCINTLVNVYKDDG 227
Score = 41.1 bits (92), Expect = 6e-04
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 133 SLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGL-TGLYRGFGVSVQGII 309
S YPLD R R+ DG + T + N + ++K DG+ GLYRG ++ +
Sbjct: 186 SQTIAYPLDVVRRRMQLAGAVPDGHKYNTCI-NTLVNVYKDDGIRRGLYRGLSINYLRVC 244
Query: 310 IYRAAYFGFYDTARGML 360
A FG Y+ + L
Sbjct: 245 PQVAIMFGVYEVTKQFL 261
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 48.8 bits (111), Expect = 3e-06
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Frame = +1
Query: 205 QREFTGLGNC-ISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKNTP 381
+R + GL +S++++ +G+ GLYRG ++ IY + G Y+ + +L +T
Sbjct: 52 ERYYKGLIRTGLSRVYREEGVRGLYRGIFPALLRQAIYSSTRLGAYEPIKNLLGATDSTS 111
Query: 382 IVISWAIAQTVTT--VAGIISYPFDTVRRRMMMQSGRAKSDILYENTIHCWATIAKTEG 552
+ I V++ + I+ P D V+ R Q+ + I Y+N H + IAK EG
Sbjct: 112 AALWKKIVAGVSSGVIGSAIATPTDLVKIRF--QAVKIGETIPYKNMFHAFYKIAKKEG 168
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 139 CFVYPLDFARTRLAADVGKGDGQR-EFTGLGNCISKIFKSDGLTGLYRGF 285
C P+D RTR G+ + G +CI K + +G+ LY+GF
Sbjct: 227 CVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGF 276
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Frame = +1
Query: 220 GLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKNTPIVISWA 399
GL + ++K +G+ ++G GVS + Y A + ++ L DP N + S +
Sbjct: 96 GLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYAAFNRIVASLEDPHNGELSDSGS 155
Query: 400 -IAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYENTIHCWATIAKTEG 552
+A T +T+ +++ YP + ++ R+ +Q KS+ Y+ H TI + EG
Sbjct: 156 MLAGTSSTLIAMVTVYPCEVIKTRLTVQHVN-KSNAHYKGMRHALKTILREEG 207
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Frame = +1
Query: 145 VYPLDFARTRLAAD-VGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRA 321
VYP + +TRL V K + + G+ + + I + +G+ LY+G S G+ +
Sbjct: 170 VYPCEVIKTRLTVQHVNKSNAH--YKGMRHALKTILREEGILALYKGVTPSFLGLFPFAG 227
Query: 322 AYFGFY---DTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMM 474
F Y D +P TPI + + A +S+PFDT+R++M +
Sbjct: 228 GSFLAYQILDKVDSTRTEPSATPICM-FVNGCVAGAFAHTLSHPFDTIRKKMQL 280
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 48.0 bits (109), Expect = 5e-06
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +1
Query: 130 TSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGII 309
T+ YPLD R RLA K ++TGL N ++I++ +G+ YRG+ ++ GI+
Sbjct: 2 TAALLTYPLDMVRARLAITQKK-----KYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIM 56
Query: 310 IYRAAYFGFYDTAR 351
Y F Y+T +
Sbjct: 57 PYAGISFFTYETCK 70
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 47.6 bits (108), Expect = 7e-06
Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 3/147 (2%)
Frame = +1
Query: 64 DKNTQ--FWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCI 237
DKN WR+ T +PLD R RL +TG+ + +
Sbjct: 22 DKNPHQPLWRFVSGATAGVVATAST-----HPLDVVRARLTVQDMSTRSISNYTGIVSAL 76
Query: 238 SKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKNTPIVISWAIAQTVT 417
+I +G+ GLY+G S+ I + YD + D ++ + +
Sbjct: 77 RRIHIEEGIRGLYKGLVPSLVSIAPFLGVQQSVYDIMKLRALDSAFAANSGTFLVCGAIA 136
Query: 418 -TVAGIISYPFDTVRRRMMMQSGRAKS 495
+A + +P D VRR+M + GR+ S
Sbjct: 137 GMIAQTVVHPLDVVRRQMQVDRGRSGS 163
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 46.4 bits (105), Expect = 2e-05
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Frame = +1
Query: 130 TSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDG-LTGLYRGFG------ 288
T+ YPLD R+RLA V + + G+ + +IF ++G + LYRGF
Sbjct: 11 TACSCTYPLDIVRSRLAFQVAD---EHTYCGICQTVKQIFMTEGGMVALYRGFTPTSLSM 67
Query: 289 VSVQGIIIYRAAYF-GFYDTARGMLP--DPKNTPIVISWAIAQTVTTVAGIIS----YPF 447
+ GI Y F F+ +G+L P+ V++ +AG S YP
Sbjct: 68 IPAVGIGFYAFESFKDFFVAMKGVLTRIHPETGETVLTAPGGLLCGALAGATSQTLAYPL 127
Query: 448 DTVRRRMMMQSGRAKSDILYENTIHCWATIAKTEG 552
D VRRRM + +G Y I+ + ++ +G
Sbjct: 128 DVVRRRMQL-AGTVADGHKYSTCINTFISVYTEDG 161
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 130 TSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGL-TGLYRGFGVSVQGI 306
TS YPLD R R+ DG + T + IS ++ DG+ GLYRG ++ +
Sbjct: 119 TSQTLAYPLDVVRRRMQLAGTVADGHKYSTCINTFIS-VYTEDGIRRGLYRGLSINYLRV 177
Query: 307 IIYRAAYFGFYDTARGML 360
A F Y+ + +L
Sbjct: 178 CPQVAVMFAVYEVVKQLL 195
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 44.0 bits (99), Expect = 8e-05
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 148 YPLDFARTRLAADVGKGDGQRE-FTGLGNCISKIFKSDGLTGLYRGFGVSVQGII-IYRA 321
+PLD + RL G++ FTG +C K +++G GLY+G + G+ I+
Sbjct: 45 HPLDTIKVRLQTMPRPKPGEKPMFTGTFDCAMKTIRNEGFFGLYKGMAAPITGVTPIFAI 104
Query: 322 AYFGFYDTARGMLPDPKNTP 381
++GF + + DP P
Sbjct: 105 CFWGFNMGKKLQMKDPNADP 124
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 43.2 bits (97), Expect = 1e-04
Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 17/139 (12%)
Frame = +1
Query: 187 VGKGDG-QREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGML- 360
+GK +G F G G + +IF + + + +GI Y F Y+T +G L
Sbjct: 81 IGKEEGILGYFKGNGTNVIRIFPYSAVQ--FAAYEEYKKGIAPYVGLNFAVYETLKGFLF 138
Query: 361 ---------------PDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKS 495
+ P+ V+ +YP D VRRRM M+ RA
Sbjct: 139 STVMASSQGASLTNIRKDRELPVNFKLMCGSLAGAVSQTATYPLDVVRRRMQMKGIRA-- 196
Query: 496 DILYENTIHCWATIAKTEG 552
D Y++T+H +++I K EG
Sbjct: 197 DFAYKSTLHAFSSIVKLEG 215
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 43.2 bits (97), Expect = 1e-04
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
Frame = +1
Query: 145 VYPLDFARTRLAADV-GKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRA 321
+ P+D + +L K + + G +C+ K+++S GL G ++G V+ I A
Sbjct: 51 IAPVDLVKIKLQMQTEAKRSTRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGFA 110
Query: 322 AYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSD 498
YFG Y+ + + V ++ +A V S +PFD ++ R+ K
Sbjct: 111 VYFGVYELLCDWFSNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGK-- 168
Query: 499 ILYENTIHCWATIAKTEG 552
Y+ + C K EG
Sbjct: 169 FRYKGMMDCALQSYKEEG 186
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Frame = +1
Query: 205 QREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKN--- 375
Q +TG +C+ K+F S+GL G +RG ++ I A YFG + +L PK
Sbjct: 294 QMAYTGSLDCLKKVFHSEGLRGCFRGMAITTTRDIPAFALYFGSFQYVCELL-TPKGEHV 352
Query: 376 ---TPIVISWAIAQTVTTVAGIISYPFDTVR 459
+PI + ++ T++ I++YP D V+
Sbjct: 353 DNLSPIRLFFS-GGIAGTLSWILTYPVDMVK 382
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 133 SLCFVYPLDFARTRLAAD--VGKGDGQREFTGLGNCISKIFKSDGLTGLYRG 282
S YP+D ++ AD G Q ++ G +C+ KI+ S G++ +G
Sbjct: 371 SWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQG 422
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +1
Query: 214 FTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGML--PDPKNTPIV 387
+ G+ + +FK++G+ +Y+G + + + + G YD + M D +N I+
Sbjct: 66 YRGMLGTMVTLFKTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKAMYGDTDVQNPKIL 125
Query: 388 ISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYENTIHCWATIAKTEG 552
A + T +A ++ P + V+ R +GR S T+ +A IA+ EG
Sbjct: 126 KKIAASITTGIMAVSVAQPTEVVKIRFQADAGRYTS-----GTMGTYAEIARNEG 175
Score = 27.5 bits (58), Expect = 7.7
Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
Frame = +1
Query: 151 PLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYF 330
P + + R AD G R +G ++I +++G+ GL++G ++ +
Sbjct: 144 PTEVVKIRFQADAG-----RYTSGTMGTYAEIARNEGMKGLWKGVFPNMARLCTVNVTEL 198
Query: 331 GFYDTARGMLPDPK--NTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDIL 504
YD+ +G+ + + + A V ++ P D V+ R M
Sbjct: 199 VVYDSIKGLFLRKQWMADEFPLHFVSAFGAGFVTTCVASPVDVVKTRYMNSPANT----- 253
Query: 505 YENTIHCWATIAKTEG 552
Y++ I C + K G
Sbjct: 254 YKSGIDCAVQLFKHNG 269
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 41.5 bits (93), Expect = 4e-04
Identities = 30/142 (21%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Frame = +1
Query: 136 LCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIY 315
+C +P ++ +T+L D + + + G +C+ K K G+ GLYRG + G +
Sbjct: 55 ICCTFPTEYVKTQLQLD--EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPK 112
Query: 316 RAAYFGFYDTARGMLPDPKNTPIVISWAIAQTV---TTVAGIISYPFDTVRRRMMMQSGR 486
+ F ++ + + D +N + +A + + A ++ P +T++ + + +
Sbjct: 113 ASVRFAVFEYLKNKMAD-ENGKLTQFQTLASGLGAGVSEAVVVVCPMETIKVKFI--HDQ 169
Query: 487 AKSDILYENTIHCWATIAKTEG 552
+ + Y+ TI KTEG
Sbjct: 170 TQPNPKYKGFFSGVRTILKTEG 191
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 41.1 bits (92), Expect = 6e-04
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Frame = +1
Query: 214 FTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLP-----DPKNT 378
+ G+ +C + +FK +G+ YR + + I ++ +F Y+ AR L DPK
Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKTH 91
Query: 379 PI--VISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILY 507
I + A+A +TT + +T R ++ G K + Y
Sbjct: 92 VIAGATAGAVASAITTPLDVAKTLLNTQERSVVNLVGTPKGHVYY 136
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = +1
Query: 130 TSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGII 309
T VYP+D +TR+ + ++ + +C K+ +++G GLYRG + G+
Sbjct: 926 TGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVS 985
Query: 310 IYRAAYFGFYDTARGMLPD 366
+A D RG+ D
Sbjct: 986 PEKAIKLTTNDFVRGIFSD 1004
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Frame = +1
Query: 235 ISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKN----TPIVISWAI 402
I K + LT R + +SV G FG+Y ML + + T V
Sbjct: 859 IMKTLRGHLLTPYVRAYLLSVAGGEAKHLVSFGYYRAFNSMLDNIRTLHGMTMKVAKGNR 918
Query: 403 AQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYENTIHCWATIAKTEG 552
+ + G + YP D V+ RM Q +++ +Y+N+I C+ + + EG
Sbjct: 919 YKEIKKATGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEG 969
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/52 (30%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +1
Query: 211 EFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDT-ARGMLP 363
+++G+G ++KI++ +GL G ++G G ++ I+ Y A F Y+ +G+ P
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKKGIAP 641
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/71 (22%), Positives = 35/71 (49%)
Frame = +1
Query: 148 YPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAY 327
YPLD R R+ + +G+G +++ + I +S+G GL++G ++ +
Sbjct: 700 YPLDVVRRRMQME--RGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLKVAPTIGIQ 757
Query: 328 FGFYDTARGML 360
F Y+ ++ +
Sbjct: 758 FAVYEVSKSAM 768
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 130 TSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRG 282
T+ V PLD +TRL + + G+ + G+ +C KI+ ++GL Y+G
Sbjct: 218 TASVAVNPLDVIKTRLQL-LNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKG 267
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/79 (30%), Positives = 37/79 (46%)
Frame = +1
Query: 130 TSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGII 309
TSLC YP + ARTRL + G++++ + + + +G GLY G G V +
Sbjct: 946 TSLC--YPHEVARTRLRQQESEFLGRQKYRSFFQTLGTVLREEGWRGLYGGLGTHVIRQV 1003
Query: 310 IYRAAYFGFYDTARGMLPD 366
A F Y+ +L D
Sbjct: 1004 PNTAIMFFTYEGVVYILRD 1022
Score = 36.3 bits (80), Expect = 0.017
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 211 EFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGML 360
+F+G+ + K++G+ L++G G ++ G+ RA YF Y + ML
Sbjct: 773 KFSGIVPYARYMVKNEGIQSLFKGLGTTLLGVTPSRAIYFAIYSKLKDML 822
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 35.1 bits (77), Expect = 0.038
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +3
Query: 339 RHGARHVARPEEHPHRHQLGHRANRHHSRRYHLVSIRHGS*AYDDAVRPCQERHSLREHH 518
RHG RH+ R H R H S RH ++ + R + RH R+H
Sbjct: 93 RHGRSRHKTSRHETSRHERSRHETRQHERSRHKTS-RHEKSRHETS-RHERSRHETRQHE 150
Query: 519 TLLG 530
TL+G
Sbjct: 151 TLVG 154
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 34.3 bits (75), Expect = 0.067
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 166 RTRLAADVGKGDGQR-EFTGLGNCISKIFKSDGLTGLYRGFG 288
R + V K G + + GLG+C+ +++++ GL G+++G G
Sbjct: 183 RVKCLLQVQKESGTKARYQGLGDCLLQVYRTGGLRGVFKGLG 224
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 33.9 bits (74), Expect = 0.089
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 3/109 (2%)
Frame = +1
Query: 151 PLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRA--- 321
P+D +L G+GD + + G I + F G G Y+G+ S+ A
Sbjct: 125 PVDIISQKLMIQ-GQGDRKVKLKGARILIRETFHQHGPGGFYKGYFASLMTYAPSSAIWW 183
Query: 322 AYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRM 468
A +GFY G L +++ + A ++ P D +R R+
Sbjct: 184 ASYGFYTGVIGNLSADGTHRLLVLGSSGVLAGVTAATLTNPLDVIRTRL 232
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 33.5 bits (73), Expect = 0.12
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Frame = +1
Query: 145 VYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAA 324
V PLD + R+ D +++ + N K DG+ GL RG+ + G +
Sbjct: 73 VVPLDLVKCRIQVD------PKKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSMQGLG 126
Query: 325 YFGFYDTAR----GMLPDPKNTPIVISWAIAQTVTT--VAGIISYPFDTVRRRMMMQSGR 486
FGFY+ + ML + + S +A + + A I P + V+ R+ Q G
Sbjct: 127 KFGFYEVFKIMYGNMLGEEYSYLYRTSLYLAASASAEFFADIALAPMEAVKVRIQTQPGW 186
Query: 487 A 489
A
Sbjct: 187 A 187
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 303 HHYLPCGIFRFLRHGAR-HVARPEEHPHRHQLGHRANRHH 419
HH+ P I LRH R H R H H H+ HR + HH
Sbjct: 175 HHHHPSTIIIILRHRHRQHYNRHRRHHHHHR--HRHHHHH 212
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 8/56 (14%)
Frame = +3
Query: 375 HPHRHQLG----HRANRHHSRRYH----LVSIRHGS*AYDDAVRPCQERHSLREHH 518
H H H L HR HH +H ++ +RH + + R H R HH
Sbjct: 155 HHHHHPLSIAIIHRHRHHHHHHHHPSTIIIILRHRHRQHYNRHRRHHHHHRHRHHH 210
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 33.1 bits (72), Expect = 0.16
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 6/140 (4%)
Frame = +1
Query: 151 PLDFARTRLAADV--GKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAA 324
P+D ++++ + + ++ + + I ++ G+ G Y+G ++ I
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 325 YFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAG----IISYPFDTVRRRMMMQSGRAK 492
+FGFY+ + +L T +S T + G ++YP D V+ MM K
Sbjct: 281 FFGFYEFTKNLLTPEGGTVNDVSPLGLLTSGAMGGFFYWFLTYPTDLVKSSMMADHS-DK 339
Query: 493 SDILYENTIHCWATIAKTEG 552
+ Y I C + EG
Sbjct: 340 ALRKYHGYIDCARKLYTNEG 359
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/45 (31%), Positives = 31/45 (68%)
Frame = +1
Query: 151 PLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGF 285
P+D A+TR+ ++ DG+ E+ G + +++I +++G+ L++GF
Sbjct: 113 PVDIAKTRIQ-NMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGF 156
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = +3
Query: 282 FRCIRTGHHYL----PCGIFRFLRHGARHVARPEEHPHRHQLGHRANRHHSRRYHLVSIR 449
F+C + Y+ CG + H +H + + H H Q H+ +HH H++
Sbjct: 214 FKCKCPANRYVYNGKSCGDGKQHHHHKQHHHQQQRHHHHEQHHHQQQQHHHHHEHIIITN 273
Query: 450 HG 455
+G
Sbjct: 274 NG 275
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 348 ARHVARPEEHPHRHQLGHRANRHHSRRYHLVSIRHGS*AYDDAVRPCQERHSLREHHTLL 527
+RH E RH+ R H R H S RH + ++ + R + RH R+H TL+
Sbjct: 57 SRHKTSRHE-TSRHERSRHETRQHERSRHKTS-RHETSRHEKS-RHERSRHETRQHETLV 113
Query: 528 G 530
G
Sbjct: 114 G 114
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 32.3 bits (70), Expect = 0.27
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +1
Query: 151 PLDFARTRLAADVGKGDGQRE-FTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAY 327
PLD + RL A G+ F G +C K + +GL GLY+G + ++ +
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKGMLSPL--LMATPSTA 97
Query: 328 FGFYDTARG---MLPDPKNTPIVISWAIA 405
FY + G L DP P ++ + A
Sbjct: 98 LTFYSLSVGKRIQLSDPYQEPTLVQYGNA 126
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 31.5 bits (68), Expect = 0.47
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 151 PLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVS 294
PLD R + + K G + G +C+ +I++ G+ G+Y+G V+
Sbjct: 157 PLD--RVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 244 IFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYD-TAR 351
+ + +G T LY GFG + + AA+F YD TAR
Sbjct: 283 LVRYEGFTALYTGFGAILIRALPVNAAFFLAYDYTAR 319
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +1
Query: 394 WAIAQTVTTVAGIISYPFDTVRRRMMMQS---GRAKSDILYENTIHCWATIAKTEG 552
+ + T + A + P + V+ RM +Q R + Y N H TIAK EG
Sbjct: 8 FVLGATAASGACFFTNPLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEG 63
>SB_4293| Best HMM Match : TFIID-18kDa (HMM E-Value=0)
Length = 160
Score = 31.1 bits (67), Expect = 0.63
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 435 DDTGDCGDGLRDGPADDDGGV 373
DD D GDG+ DG DDD G+
Sbjct: 138 DDDDDDGDGVCDGDGDDDNGI 158
>SB_1394| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 31.1 bits (67), Expect = 0.63
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 435 DDTGDCGDGLRDGPADDDGGV 373
DD D GDG+ DG DDD G+
Sbjct: 15 DDDDDDGDGVCDGDGDDDNGI 35
>SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1576
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 290 TPKPLYRPVRPSDLKILLMQLPRPVNSRCPSPLPTSAARRVRAKSSG 150
T K PV P+ L + P+P+ + P P+ TSAA+ + ++G
Sbjct: 816 TAKSSTPPVPPASLSTI-STTPQPITTSAPQPITTSAAQPITTLAAG 861
>SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9)
Length = 138
Score = 31.1 bits (67), Expect = 0.63
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +3
Query: 342 HGARHVARPEEHPHRHQLGHRANRHHSRRYHLVSI 446
H H +H H H H +HH +H+++I
Sbjct: 47 HHHHHQHNHHQHHHHHNHHHHHQQHHHHHHHIINI 81
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = +3
Query: 342 HGARHVARPEEHPHRHQLGHRANRHHSRRYH 434
H ++ H H HQ H + HH +H
Sbjct: 36 HKLKNPRHRYHHHHHHQHNHHQHHHHHNHHH 66
>SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)
Length = 383
Score = 30.7 bits (66), Expect = 0.83
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 229 NCISKIFKSDGLTGLYRGFGVSVQGIIIY 315
+C I++ +G+ G YRGFG + ++Y
Sbjct: 332 DCFRTIYQQEGIFGFYRGFGALLIQCVVY 360
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = +1
Query: 295 VQGIIIYRAAYFGFYDTARGMLPDPKNTPIVISWAIAQTVTT-----VAGIISYPFDTVR 459
+Q +++ + + G Y R DP T + + V V +I YPF+TV
Sbjct: 240 IQHLVLIKMGHTGLYGDTRDCNEDPPPTSDMTQSYYPELVANFMAFVVPDLILYPFETVL 299
Query: 460 RRMMMQSGRAKSDIL 504
R+ +Q R D L
Sbjct: 300 HRLYIQGTRTIIDDL 314
>SB_26219| Best HMM Match : MANEC (HMM E-Value=0.12)
Length = 307
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/66 (37%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -1
Query: 513 VLVENVALGTAG--LHHHTPTNRVEWIRDDTGDCGDGLRDGPADDDGGVLRVGQHAARRV 340
VL V LG AG + T + + DD GD GDG DG D DG AR V
Sbjct: 42 VLTIGVGLGVAGGWICIATLVDAGDGDNDDDGDDGDG--DGDGDGDGSHSDDMMSNARHV 99
Query: 339 VETEIC 322
V C
Sbjct: 100 VANRRC 105
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 342 HGARHVARPEEHPHRHQLGHRANRHHSRRYH 434
H H + H HRH+ HR + HH Y+
Sbjct: 318 HHHHHHHHHQRHRHRHRHRHRHHHHHHHEYN 348
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 375 HPHRHQLGHRANRHHSRRYH 434
HPH H L H +RHH R +H
Sbjct: 567 HPHHHHLHH--HRHHHRHHH 584
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 311 IMMPCTDTPKPLYRPVRPSDLKILLMQL 228
I++PC P LYR +RP L+I + Q+
Sbjct: 587 IILPCPSDPCSLYRELRPQALQIQMSQV 614
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 345 GARHVARPEEHPHRHQLGHRANRHHSRRYHLVSIRHGS*AYDDAVR 482
GAR ++H HRH+ H R H+R+ +H + ++ +R
Sbjct: 916 GARENDPGKKHKHRHRRHHHHRRQHNRKIKKHRRKHSARKHERRLR 961
>SB_6969| Best HMM Match : Astacin (HMM E-Value=0)
Length = 225
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 220 GLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAY-FGFY 339
G C S + + G+ + GFG QG++++ + GFY
Sbjct: 88 GFSKCWSYVGRIGGMQKISIGFGCFTQGVVVHEIGHALGFY 128
>SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 351 RHVARPEEHPHRHQLGHRANRHHSRRYHL 437
RH RP H R +L R R H+RR L
Sbjct: 157 RHTRRPRLHTRRPRLHRRRTRLHTRRPRL 185
>SB_36609| Best HMM Match : Ion_trans_2 (HMM E-Value=1.7e-13)
Length = 661
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 435 DDTGDCGDGLRDGPADDDG 379
DD GD GDG D DDDG
Sbjct: 603 DDDGDDGDGDDDDDGDDDG 621
>SB_30502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 432 DTGDCGDGLRDGPADDDGGVL 370
D DC D DG DDDGG +
Sbjct: 81 DDDDCDDDDGDGDGDDDGGAM 101
>SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 612
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +1
Query: 202 GQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYD----TARGMLPDP 369
G +T + + I+ ++G GLY G +V + Y FY A+G+L
Sbjct: 460 GNFNYTSMRQALVSIWTNEGGRGLYSGLVATVARDAPFSGLYLMFYTQIKRRAKGLLQVG 519
Query: 370 KNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMM 474
T ++ +A +++ P D V+ R+ M
Sbjct: 520 DLTS-GQNFICGIMAGAMASVVTQPADVVKTRLQM 553
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/47 (21%), Positives = 28/47 (59%)
Frame = +1
Query: 220 GLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGML 360
G+ + +++ + ++G TGL+RG ++ ++ Y + F ++ + +L
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKLL 47
>SB_2409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 441 IRDDTGDCGDGLRDGPADDDGG 376
+ DD D GDG DG D DGG
Sbjct: 234 VGDDDDDDGDGDGDGDGDGDGG 255
>SB_23494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1013
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -1
Query: 432 DTGDCGDGLRDGPADDDGGVLRVGQHAARRVVET 331
D D GD DG D DG G H A +VET
Sbjct: 493 DDDDYGDDDDDGDGDGDGDA---GHHTAESIVET 523
>SB_7103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 32
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -1
Query: 435 DDTGDCGDGLRDGPADDDG 379
DD GD GDG DG DDDG
Sbjct: 8 DDDGD-GDGDGDGDGDDDG 25
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 27.9 bits (59), Expect = 5.8
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +3
Query: 342 HGARHVARPEEHPHRHQLGHRANRHHSRRYH 434
H H +H H H H + HH +++H
Sbjct: 261 HHHHHQHNHHQHHHHHHHHHHNHHHHHQQHH 291
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +3
Query: 342 HGARHVARPEEHPHRHQ-LGHRANRH-HSRRYHLVSIRHGS*AYDD 473
HG H E H H H+ GH H HS H S +H ++D+
Sbjct: 309 HGHSHGHSHENHGHSHENHGHSHENHGHSHENHGHSHKHHGHSHDN 354
>SB_9336| Best HMM Match : Taeniidae_ag (HMM E-Value=0.9)
Length = 219
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 432 DTGDCGDGLRDGPADDDGG 376
D GD GDG DG D DGG
Sbjct: 75 DGGDGGDGDGDGDGDGDGG 93
>SB_6063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 375 HPHRHQLGHRANRHHSRRYHLVSIRH 452
H H +L H +NRH + H V ++H
Sbjct: 24 HRHSVRLKHNSNRHTTSHKHYVRLKH 49
>SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38)
Length = 641
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 339 RHGARHVARPEEHPHRHQLGHRANRHHSRRYH 434
+H H + +H HRH+ + N+HH R H
Sbjct: 600 QHYRHHQKQQNQHHHRHR--KQQNQHHHRHGH 629
>SB_19076| Best HMM Match : HECT (HMM E-Value=0)
Length = 2018
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 360 ARPEEHPHRHQLGHRANRHHSRRYHLVSIRHGS 458
A P E P H+ HR RH R+ LV H +
Sbjct: 883 ADPHERPSTHR--HRGTRHRRRQARLVGQEHAA 913
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,159,064
Number of Sequences: 59808
Number of extensions: 379876
Number of successful extensions: 1903
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1829
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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