Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_D18
(577 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Sch... 41 1e-04
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 35 0.010
SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr ... 34 0.013
SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr ... 32 0.069
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 31 0.12
SPAC607.09c |btn1||battenin CLN3 family protein|Schizosaccharomy... 30 0.28
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 29 0.64
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.64
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 29 0.64
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 28 1.1
SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces pombe... 28 1.1
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 27 1.5
SPCC4G3.04c |coq5||C-methytransferase |Schizosaccharomyces pombe... 27 1.5
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 27 2.0
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.6
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 2.6
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa... 26 3.4
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po... 26 3.4
SPBC16E9.07 |mug100||sequence orphan|Schizosaccharomyces pombe|c... 26 4.5
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 26 4.5
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 26 4.5
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 6.0
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 25 6.0
SPBC28F2.08c |||HRD ubiquitin ligase complex subunit |Schizosacc... 25 7.9
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 25 7.9
SPAC1687.12c |coq4||ubiquinone biosynthesis protein Coq4|Schizos... 25 7.9
>SPBC1347.09 |||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 284
Score = 40.7 bits (91), Expect = 1e-04
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = +3
Query: 204 LKVLDVACGTGVDSMLLLEQGFELVSTDGSEQMLE-FARKAKLRNRNDSRYREWIITKAN 380
+ +LD ACGTG+ S L ++V D S+ M++ + K + N R ++++ +
Sbjct: 79 MSILDFACGTGLISQHLFPYCKQIVGIDVSQDMVDVYNEKFRKMNIPKERACAYVLSLDD 138
Query: 381 WKTLTDDIGSLLPGALFDAVICLANSFAHIYDEREQKTCLSKLRK 515
D G FDAV+C + ++ HI D +E LSKL K
Sbjct: 139 ----LDGNGDEPFSTEFDAVVC-SMAYHHIKDLQEVTNKLSKLLK 178
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 34.7 bits (76), Expect = 0.010
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 171 FFGDILRANGCL---KVLDVACGTGVDSMLLLEQGFELVSTDGSEQMLEFARK 320
F ++ R C K+LD+ CG G+ S + G + + D S +E A+K
Sbjct: 65 FMTEVFRERNCFSGKKILDIGCGGGILSESMARLGASVTAVDASPMAIEVAKK 117
>SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 268
Score = 34.3 bits (75), Expect = 0.013
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 180 DILRANGCLKVLDVACGTGVDSMLLLEQGFELVSTDGSEQMLEFARKAK 326
++L A G +LD+ CG+G+ + + QG +V D S ML A +++
Sbjct: 41 ELLDAEGPSFILDIGCGSGISTQIGESQGHVVVGMDISPSMLSVALESQ 89
>SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 31.9 bits (69), Expect = 0.069
Identities = 15/45 (33%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +3
Query: 204 LKVLDVACGTGVDSMLLLEQGFELVSTDGSEQMLEFARK-AKLRN 335
++VL++ GTG+ S+L + G +++TDG ++ + R+ A+L N
Sbjct: 172 MRVLELGAGTGLVSILCAKMGSIVLATDGDTKVCDGVRENARLNN 216
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 31.1 bits (67), Expect = 0.12
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = -1
Query: 307 SSICSEPSVETNSNPCSNSNIESTPVPHATSSTLRQPFARKISPKKCLYSYVRWSTLPIS 128
SS+ S S NS+ S EST P A + Q S YSY+ +TL +
Sbjct: 222 SSVASSESTIANSDQSSFITYESTQNPTANKTDASQQSTESTSSSASAYSYI--TTLQTA 279
Query: 127 SSYNKAVSE 101
++ + SE
Sbjct: 280 TTAQQTTSE 288
>SPAC607.09c |btn1||battenin CLN3 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 396
Score = 29.9 bits (64), Expect = 0.28
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -1
Query: 385 FQFAFVMIHSLYLESFLLRSFAFLANSSICSEPSVETNSNPCSNSNIESTPVPHATSSTL 206
F +I S +L FLL + F+ S + PS+ N P + ++ + V ++L
Sbjct: 156 FSVRSTLIISSFLPLFLLIMYFFVLPESESTSPSINNNYTPIESIDLRAGHVSFNFVNSL 215
Query: 205 RQPF 194
+Q F
Sbjct: 216 KQTF 219
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 28.7 bits (61), Expect = 0.64
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 210 VLDVACGTGVDSMLLLEQGFELVSTDGSEQMLEFA 314
VLDV CGTG+ SM + G + V + +++ A
Sbjct: 259 VLDVGCGTGILSMFCAKAGAKKVYAVDNSDIIQMA 293
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.7 bits (61), Expect = 0.64
Identities = 31/92 (33%), Positives = 42/92 (45%)
Frame = -1
Query: 433 SNKAPGSKLPISSVKVFQFAFVMIHSLYLESFLLRSFAFLANSSICSEPSVETNSNPCSN 254
S+ A S L SS A I S L S + S + LA+SS S S+ ++S +N
Sbjct: 111 SSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSS-LASSSTTSS-SLASSS---TN 165
Query: 253 SNIESTPVPHATSSTLRQPFARKISPKKCLYS 158
S +TP ATSS+L A + L S
Sbjct: 166 STTSATPTSSATSSSLSSTAASNSATSSSLAS 197
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 28.7 bits (61), Expect = 0.64
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 271 SNPCSNSNI-ESTPVPHATSSTLRQPFARKISPKKCLYSYVRWSTLPISSSYNKA 110
SN S S++ P P + L + ++++SP+ CL+ +S+ + KA
Sbjct: 175 SNEASKSHLFTQEPTPEEIEAELARRSSQRLSPRDCLFCAASFSSFDTCKKHMKA 229
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 27.9 bits (59), Expect = 1.1
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Frame = -1
Query: 352 YLESFLLRSFAFLANSSIC---SEP---SVETNSNPCSNSNIEST-PVPHATSST 209
Y S L S + L+NS+I S P SV T+S+ SNS I +T PVP TSST
Sbjct: 74 YTGSKSLSSSSILSNSTISTSSSTPITASVPTSSSILSNSTIPTTSPVP-TTSST 127
>SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 27.9 bits (59), Expect = 1.1
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = -1
Query: 310 NSSICSEPSVETNSNPCSNSNIEST-PVPHATSSTLRQPFARKISPKKCLYSYVRWSTLP 134
+S+I +EP E+ S+ S+S+ ST P +S +LR A +I+P + V+ STL
Sbjct: 84 SSTILNEPYNESPSSSSSDSSSRSTSPFSQLSSQSLRLN-AEEIAPSSLINKAVQ-STLR 141
Query: 133 IS 128
+S
Sbjct: 142 LS 143
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 27.5 bits (58), Expect = 1.5
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 93 DQYSETALLYDELIGSVDQRTYEYKHFFGDILRANGCLKVLDVACGTGVDSMLLLEQGFE 272
D YS + ++E++ D RT Y+ VLDV CGTG+ SM G +
Sbjct: 21 DSYSHWGI-HEEMLKD-DVRTLSYRDAIMQNPHLFRDKIVLDVGCGTGILSMFCARAGAK 78
Query: 273 LV-STDGSE 296
V D SE
Sbjct: 79 HVYGVDMSE 87
>SPCC4G3.04c |coq5||C-methytransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 305
Score = 27.5 bits (58), Expect = 1.5
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +3
Query: 66 EEVRREIARDQYSETALLYDELIGSVDQRTYE-YKHFFGDILRANGC---LKVLDVACGT 233
E+ + + ++ +S A YDE+ ++ + +K+ F L +K+LDVA GT
Sbjct: 58 EDEKEHLVKNVFSSVAKKYDEMNDAMSLGIHRLWKNIFVSRLNPGNSTVPMKILDVAGGT 117
Query: 234 G 236
G
Sbjct: 118 G 118
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 27.1 bits (57), Expect = 2.0
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = -1
Query: 493 VFCSRSS*MWAKEFARQITASNKAPGSKLPISSVKVFQFAFVMIHSLYLESFLLRSF-AF 317
++C+ + +W K+ R++ + S +PI + + ++ SLY+ ++R F F
Sbjct: 588 IYCTAAYFVWQKKVERKLWYLTNSKLSFVPILVSFIILYNTMVPISLYVSMEIIRVFQTF 647
Query: 316 LANSSI-CSEPSVETNSNPCSNSNIE 242
L S I P +T S+S +E
Sbjct: 648 LVQSDIDLYYPENDTRCEVRSSSILE 673
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 26.6 bits (56), Expect = 2.6
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 319 FLANSSICSEPSVETNSNPCSNSNIESTPVPHATSSTLRQ 200
F NS+ SV TN+ SNS S P + ++ST Q
Sbjct: 354 FYWNSTSSLSSSVFTNTTSSSNSTNSSIPTTYPSNSTTYQ 393
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 26.6 bits (56), Expect = 2.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 258 EQGFELVSTDGSEQMLEFARKAKLRNRNDSRYREWIITKANW 383
E G E V SEQ+ K+R+ S++REW+ + W
Sbjct: 1275 ENGTEDVFARNSEQVYN-GPYDKIRDYRQSKWREWLNSDEGW 1315
>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
Msa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 3.4
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -1
Query: 310 NSSICSEPSVETNSNPCSNSNIESTPVPHATSSTLRQPFARKISPKKCLY 161
NS+ +P +ET S+ STP+P ++SS + P + + P CL+
Sbjct: 41 NSTTFIKPPLETASS--------STPIPSSSSSGVLNPSSVRGKPVACLF 82
>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 26.2 bits (55), Expect = 3.4
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -1
Query: 304 SICSEPSVETNSNPCS-NSNIESTPVPHATSSTLRQPFARKISPKKCLYSYV--RWSTLP 134
S+ + P + +S+ + N+ ++ P P +TS+T QP+ P S+V +W
Sbjct: 221 SLYASPRPQVSSSSITTNATYQNLPSPVSTSTTSSQPYGAFHQPATTGSSFVADKWKMPM 280
Query: 133 ISSSYNKA 110
+S+ A
Sbjct: 281 FTSNVTSA 288
>SPBC16E9.07 |mug100||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 313
Score = 25.8 bits (54), Expect = 4.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 394 VKVFQFAFVMIHSLYLESFLLRSFAFLANSSICSEPSVETNSNPC 260
V +F F HSL S F+ ++C+E S++ N N C
Sbjct: 191 VLLFTLTFKSKHSLNAYSLTASQFS---GHTVCNESSLKPNENSC 232
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 25.8 bits (54), Expect = 4.5
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +3
Query: 186 LRANGCLKVLDVACGTGVDSMLLLEQGFELVSTDGSEQMLEFARKAKLRNRNDSRYRE 359
L ANG LKV V TG + + + +S+ ++M+E A K K ++++ ++ E
Sbjct: 483 LDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLE 540
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 25.8 bits (54), Expect = 4.5
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 141 VDQRTYEYKHFFGDILRANGCLKVLDV-ACGT 233
V +R +E++ FFGD + + VLDV A GT
Sbjct: 192 VSKRVHEFQEFFGDGITSLTQAPVLDVLAVGT 223
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 6.0
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = -1
Query: 328 SFAFLANSSICSEPSVETNSNPCSNSNIESTPVPHATSSTLRQPFARKISPKKCLYSYVR 149
S + +++SS S T+S S+S+ S+P +TSST+ + S L S
Sbjct: 269 SSSIISSSSSSSSSPTSTSSTISSSSSSSSSPT--STSSTISSSSSSSSSFSSTLSSSSM 326
Query: 148 WSTLPISSS 122
S+ SSS
Sbjct: 327 SSSSSFSSS 335
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 25.4 bits (53), Expect = 6.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 208 LRQPFARKISPKKCLYSYVRWSTLPISSSYNK 113
L+QPF + P K +Y +R + I YNK
Sbjct: 534 LKQPFIGEAKPGKAVYVELRNVPIEIFEYYNK 565
>SPBC28F2.08c |||HRD ubiquitin ligase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 713
Score = 25.0 bits (52), Expect = 7.9
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -3
Query: 368 DDPLS--ISGIVSIAKFCFSGKL*HLFRAVSRNQFKSLL 258
+DPL+ ++G VS+A HL RAVS +S+L
Sbjct: 350 NDPLAFAVAGKVSLANGQIDEATVHLIRAVSNGHLESVL 388
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 25.0 bits (52), Expect = 7.9
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 331 RSFAFLANSSICSEPSVETN--SNPCSNSNIESTPVPHATSS 212
++F F + + S PS ++ S P S+S + +PH TSS
Sbjct: 99 KNFPFRPPTRLTSTPSNSSSLPSIPSSSSTPSISSIPHTTSS 140
>SPAC1687.12c |coq4||ubiquinone biosynthesis protein
Coq4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.0 bits (52), Expect = 7.9
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -1
Query: 229 PHATSSTLRQPFARKISPKKCLYSYVRW 146
P TS +L PF R + P YV W
Sbjct: 114 PRMTSKSLNLPFLRTLPPNTLGKIYVDW 141
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,462,859
Number of Sequences: 5004
Number of extensions: 51346
Number of successful extensions: 190
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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