Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_D18
(577 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 36 0.031
02_05_1128 + 34314866-34315294,34315365-34315440,34315548-343156... 33 0.16
01_01_0130 + 1182504-1182817,1183024-1183152,1183582-1183716,118... 32 0.28
05_04_0119 - 18169729-18169887,18170515-18170653,18170728-181709... 31 0.50
03_02_0824 + 11556128-11556989,11557515-11559134,11559236-11559825 31 0.66
01_06_0299 + 28305447-28305729,28305892-28306104,28306915-283070... 31 0.66
08_02_0593 + 19078264-19078609,19078724-19082256 31 0.87
06_01_0375 + 2699179-2699264,2699697-2699786,2699913-2699991,270... 30 1.1
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 29 2.7
05_07_0008 - 27007919-27007944,27008070-27008127,27008218-270082... 29 3.5
01_06_0498 + 29810105-29810401,29811448-29812726,29813969-298142... 29 3.5
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 28 4.6
01_06_0595 - 30485460-30486097,30486721-30487179,30487339-304875... 28 6.1
01_06_0097 + 26413647-26415101 28 6.1
11_04_0265 + 15541329-15541568,15541653-15541901,15542172-155423... 27 8.1
08_02_0585 + 19014674-19014871,19014987-19015132,19016742-190168... 27 8.1
06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,376... 27 8.1
03_06_0324 + 33133081-33133260,33133381-33133481,33133665-331337... 27 8.1
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 35.5 bits (78), Expect = 0.031
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 117 LYDELIGSVDQRTYEYKH-FFGDILRANGCLKVLDVACGTGVDSMLLLEQG-FELVSTDG 290
++ E++G RT Y+ G+ NG VLDV CGTG+ S+ + G +++ DG
Sbjct: 265 IHREMLGD-KVRTEAYRDALLGNPSLMNGAT-VLDVGCGTGILSLFAAKAGASRVIAVDG 322
Query: 291 SEQMLEFARKAKLRN 335
S +M+ A + N
Sbjct: 323 SAKMVSVATEVAKSN 337
>02_05_1128 +
34314866-34315294,34315365-34315440,34315548-34315631,
34315729-34315784,34316302-34316358,34316459-34316508,
34316587-34316739,34316842-34316992,34317469-34317633
Length = 406
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 210 VLDVACGTGVDSMLLLEQGFELVSTDGSEQMLEFA 314
+LD+ CG+G+ L EQG + D S+ ML+ A
Sbjct: 165 LLDIGCGSGLSGETLTEQGHHWIGYDISKSMLDVA 199
>01_01_0130 +
1182504-1182817,1183024-1183152,1183582-1183716,
1184296-1184392,1184633-1184736,1184924-1184975,
1185261-1185458
Length = 342
Score = 32.3 bits (70), Expect = 0.28
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 210 VLDVACGTGVDSMLLLEQGF-ELVSTDGSEQMLEFARKAKLRN 335
VLD+ G+G S L +QGF +L D SE +E AR +R+
Sbjct: 175 VLDIGTGSGRLSQQLAKQGFSDLTGIDHSEGAIEVARNLAIRD 217
>05_04_0119 -
18169729-18169887,18170515-18170653,18170728-18170974,
18171585-18171968,18172251-18172540,18172884-18173295,
18173409-18173420,18173943-18174135
Length = 611
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +3
Query: 177 GDILRANGCLKVLDVACGTGVDSMLLLEQGFELVS---TDGSEQMLEFA 314
GD LR+ G ++VLDV CG S LL +S DG E ++FA
Sbjct: 216 GD-LRSAGVVQVLDVGCGVASFSAYLLPLDIHTMSFAPKDGHENQIQFA 263
>03_02_0824 + 11556128-11556989,11557515-11559134,11559236-11559825
Length = 1023
Score = 31.1 bits (67), Expect = 0.66
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -3
Query: 476 VVDVGEGIRQTDHGVEQSAWQQTSNIISQGFPICFCDDPLSISGIVSIA 330
+++ G GIRQ G + W TS + S G P+ + S I+SIA
Sbjct: 9 LLEFGRGIRQDSSGHRATPWNPTSALDSDGCPLDWHGVQCSNGQILSIA 57
>01_06_0299 +
28305447-28305729,28305892-28306104,28306915-28307043,
28307677-28307857,28308329-28308425,28309157-28309260,
28309734-28309785,28310040-28310252
Length = 423
Score = 31.1 bits (67), Expect = 0.66
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 210 VLDVACGTGVDSMLLLEQGF-ELVSTDGSEQMLEFARKAKLRN 335
VLDV G G+ L +QGF L TD SE +E A+ R+
Sbjct: 251 VLDVGTGNGLLLQALAKQGFSNLTGTDYSEGAIELAKNLAARD 293
>08_02_0593 + 19078264-19078609,19078724-19082256
Length = 1292
Score = 30.7 bits (66), Expect = 0.87
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 126 ELIGSVDQRTYEYKHFFGDILRANGCLKVLDVACGT 233
E I + + TY+Y + G++ NG +KV D CG+
Sbjct: 1249 ENIPPLQELTYDYNYKIGEVRDLNGRVKVKDCHCGS 1284
>06_01_0375 +
2699179-2699264,2699697-2699786,2699913-2699991,
2700816-2700893,2701290-2701338,2702183-2702232,
2702704-2702853,2703437-2703517,2703593-2703609,
2705804-2705893,2706033-2706111,2706234-2706311,
2707554-2707687,2707858-2707936,2708108-2708188,
2708263-2708400
Length = 452
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 204 LKVLDVACGTGVDSMLLLEQGFELVSTDGSEQMLEFAR 317
LKV+DV CG G+ S L G + D ++ ++ AR
Sbjct: 71 LKVIDVGCGGGILSEPLARMGATVTGIDAVDKNIKIAR 108
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 204 LKVLDVACGTGVDSMLLLEQGFELVSTDGSEQMLEFAR 317
LK++DV C G+ S L G + D +++ ++ AR
Sbjct: 269 LKIIDVGCAAGMLSEPLARMGATVTGIDAADESIKIAR 306
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 210 VLDVACGTGVDSMLLLEQGFELVSTDGSEQMLEFARKAKLRNRNDSR 350
V+DV CGTG+ S+ G + V + +M AR+ N D +
Sbjct: 87 VMDVGCGTGILSVFCARAGAKCVYAVEASEMATQAREIVKANNLDDK 133
>05_07_0008 -
27007919-27007944,27008070-27008127,27008218-27008292,
27008417-27008470,27008574-27008840,27008913-27009193,
27009268-27009409,27009491-27009601,27009975-27010013,
27010173-27010310,27010415-27010552,27011438-27011562,
27011702-27011723
Length = 491
Score = 28.7 bits (61), Expect = 3.5
Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Frame = +3
Query: 45 EVHHTTIEEVRREIARDQYSETALL-YDELIGS--VDQRTYEYKHFFGDILRANGCLKVL 215
+V T +R + QY T +L Y+ + G V E F D L KVL
Sbjct: 198 KVKSTEDRGFQRFLDNVQYKTTGILRYERVFGEGYVSTGGIETTKEFVDKLDLKPGQKVL 257
Query: 216 DVACGTGVDSMLLLEQ-GFELVSTDGSEQMLEFA 314
DV CG G + E ++ D S M+ FA
Sbjct: 258 DVGCGIGGGDFYMAENYDAHVLGIDLSINMVSFA 291
>01_06_0498 +
29810105-29810401,29811448-29812726,29813969-29814204,
29814327-29814968
Length = 817
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 84 IARDQYSETALLYDELIGSVDQRTYEYKHFFGDILRA--NGCLKVLDVACGTGVDSMLLL 257
I + Q + A LY+ + ++ Y + L A G + D CGTG S+ +
Sbjct: 547 IEKKQRARMAGLYERPSETYTKKRPRYPDAWFSKLAALTAGHHRAWDAGCGTGQASISIA 606
Query: 258 EQGFELVSTDGSEQMLEFA 314
E +V+TD SE + A
Sbjct: 607 EHYDSVVATDASEGQIRHA 625
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 201 SRLHVKYHQRNACTRMSVGPRYQSARHI 118
++ ++ HQRN CT S G R+ S +++
Sbjct: 807 TKAELRAHQRNICTDESCGKRFSSHKYL 834
>01_06_0595 -
30485460-30486097,30486721-30487179,30487339-30487558,
30488229-30489980
Length = 1022
Score = 27.9 bits (59), Expect = 6.1
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = -1
Query: 313 ANSSICSEPSVETNSNPCSNSNIESTPVPHATSSTLRQPFARKISPKKCLYSYVRWSTLP 134
+NS + S + N NS IE+ + HA +++ RKI K+ S V T P
Sbjct: 754 SNSHLLSTSAPRANEQS-RNSKIENELIWHAVLESIQSDTLRKIMAKEGRLSSVSLGTAP 812
Query: 133 -----ISSSYNKAVSE 101
SS NK+ +E
Sbjct: 813 TVQLIFSSRVNKSKAE 828
>01_06_0097 + 26413647-26415101
Length = 484
Score = 27.9 bits (59), Expect = 6.1
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +3
Query: 51 HHTTIEEVRREIARDQYSETALLYDELIGSVDQRTYEYKHFFGDILRAN-GCLKVLDVAC 227
HH I + E+ RD Y + ++ VD+ +E G R + G K D+
Sbjct: 242 HHVAISDATGEMLRDVYQIPSRRVHVILNGVDEAQFEPDAALGRAFREDLGLPKGADLV- 300
Query: 228 GTGVDSMLLLEQGFELV 278
GV L+ ++G L+
Sbjct: 301 -FGVSGRLVKDKGHPLL 316
>11_04_0265 +
15541329-15541568,15541653-15541901,15542172-15542321,
15542427-15542901,15543132-15543445,15543875-15543973,
15544567-15544659,15544737-15544922
Length = 601
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -1
Query: 295 SEPSVETNSNPCSNSNIESTPVPHATSSTLRQP 197
+EP + + +P N ++ TPVP +++ P
Sbjct: 425 TEPEIFEDPSPAKNPEVQETPVPEKATTSSEVP 457
>08_02_0585 +
19014674-19014871,19014987-19015132,19016742-19016844,
19017064-19017250,19017368-19017461,19017570-19017723,
19018076-19018192,19018276-19018296,19019096-19019209,
19019970-19020152,19021032-19021239,19021326-19021447,
19021559-19021656,19021875-19022052,19022130-19022244,
19022331-19022398,19022526-19022603,19023737-19023814,
19023897-19024082
Length = 815
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 99 YSETALLYDELIGSVDQR 152
Y ETALLYDEL+ S +
Sbjct: 275 YRETALLYDELLSSASNK 292
>06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,
3764013-3764961,3766967-3767064,3768144-3768284,
3768758-3768874,3768924-3769013,3769014-3771818
Length = 1632
Score = 27.5 bits (58), Expect = 8.1
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = +3
Query: 60 TIEEVRREIARDQYSETAL--LYDELIGSVDQRTYEYKHFFGDILRANGCLKVLDVACGT 233
T+E + +I + + A + + + V Q I ++G L CG
Sbjct: 1395 TVESIHGDIGNNSNNSAACRSMGSDYMEEVHQLVTNCSEISAAIPESSGTLNNFAKCCGD 1454
Query: 234 GVDSMLLLEQGFELVSTDGSE 296
+ LL+Q E VSTD E
Sbjct: 1455 SANKNSLLDQTSENVSTDHQE 1475
>03_06_0324 +
33133081-33133260,33133381-33133481,33133665-33133797,
33133936-33134027,33134309-33134408,33134505-33134577,
33134659-33134779,33135418-33135537,33136089-33136179,
33136288-33136305
Length = 342
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 157 TSTSISLVIFYVQTAALRCSTSHAELVLIQCCCWSKDLN 273
TST S I+ + A + S + I+CCC+S+D N
Sbjct: 178 TSTDGSARIWNIDEGAPLVNLSRSSDEKIECCCFSRDGN 216
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,587,519
Number of Sequences: 37544
Number of extensions: 317951
Number of successful extensions: 999
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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