Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_D18
         (577 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    34   0.001
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   2.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   5.0  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    21   6.6  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 33.9 bits (74), Expect = 0.001
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = -1

Query: 313 ANSSICSEPSVETNSNPCSNSNIESTPVPHATSSTLRQPFARKISPKK 170
           A++++  EP VETNS+P  N  I S P    +SS   +  A    P K
Sbjct: 495 ASTAVIHEPVVETNSSPSPNPRIASAPSSSTSSSPPAKGAAAAGQPSK 542


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 235 VLIQCCCWSKD 267
           V++ CCCW  D
Sbjct: 7   VVMSCCCWCCD 17


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 30/154 (19%), Positives = 65/154 (42%), Gaps = 3/154 (1%)
 Frame = +3

Query: 105 ETALLYDELIGSVDQRTYEYKHFFGDI-LRANGCLKVLDVACGTGVDSM-LLLEQGFELV 278
           E +LLY  L+G+ D +T+     +  + +     LK    A  T  D+  ++    +E++
Sbjct: 103 EVSLLYRILLGAKDYQTFLKTAAWARVHVNEGQFLKAFVAAVLTRQDTQSVIFPPVYEIL 162

Query: 279 STDG-SEQMLEFARKAKLRNRNDSRYREWIITKANWKTLTDDIGSLLPGALFDAVICLAN 455
                  ++++ A+   ++N      ++ I+   N+  L       L  + F   I LA 
Sbjct: 163 PQHHLDSRVIQEAQNIAIQNTQGKNNQQNILIPVNYSALLSHDEQQL--SYFTQDIGLAA 220

Query: 456 SFAHIYDEREQKTCLSKLRKMPETRRVYYWSIIG 557
            +A +      +    + ++ P T++ Y   I+G
Sbjct: 221 YYAQVNLAGYIQEQNQQQQQQPLTQQQYQQQIVG 254


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -3

Query: 419 WQQTSNIISQGFPICFCDDPLSISG 345
           W+   NII++G P+   ++ + + G
Sbjct: 384 WENEMNIITKGKPLIRVENIIDLEG 408


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 292 EPSVETNSNPCSNS 251
           EP + +N+NP SN+
Sbjct: 78  EPKIISNNNPLSNN 91


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,591
Number of Sequences: 438
Number of extensions: 3337
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)