Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_D14
(442 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 57 5e-09
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 57 6e-09
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 50 7e-07
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 50 9e-07
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 47 6e-06
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 46 9e-06
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 46 1e-05
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 44 5e-05
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 43 8e-05
At1g30220.1 68414.m03697 sugar transporter family protein simila... 29 1.1
At5g42390.1 68418.m05161 metalloendopeptidase identical to chlor... 29 1.8
At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containi... 27 4.2
At1g50790.1 68414.m05712 hypothetical protein 27 4.2
At2g33570.1 68415.m04114 expressed protein 27 5.6
At2g43330.1 68415.m05388 sugar transporter family protein simila... 27 7.4
At5g17920.1 68418.m02101 5-methyltetrahydropteroyltriglutamate--... 26 9.8
At3g05140.1 68416.m00558 protein kinase family protein contains ... 26 9.8
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 57.2 bits (132), Expect = 5e-09
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Frame = +2
Query: 20 REGFTALVREMKQALNVKPNMQLVISVLPNVNS-SIYFDVPSIINLVDIVNIQAFDYYTP 196
RE +A+V E + KP + L +V + N S+ + V ++ + +D VN+ A+D+Y P
Sbjct: 156 REWRSAVVAEASSS--GKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGP 213
Query: 197 ERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 376
+ + A ++ P N P + DA WIQ G P K VLG G W+L + +
Sbjct: 214 GWS-RVTGPPAALFDPSNAGP--SGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANS 270
Query: 377 ISGVPP 394
S P
Sbjct: 271 HSYYAP 276
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 56.8 bits (131), Expect = 6e-09
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +2
Query: 47 EMKQALNVKPNMQLVISVL-PNVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADY 223
E + + KP + L +V +V + + V + +D VNI A+D+Y P + K
Sbjct: 154 EAESRRSSKPTLLLTAAVYYSSVYKTFTYPVQVMRESLDWVNIIAYDFYGPVSSSKFTVP 213
Query: 224 TAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 376
TA ++ N + + D+ + WI++G P K VLG S G W L +D +
Sbjct: 214 TAGLHVSSNNEG-PSGDSGLKQWIKDGLPEKKAVLGFSYVGWAWTLQNDKD 263
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 50.0 bits (114), Expect = 7e-07
Identities = 28/86 (32%), Positives = 47/86 (54%)
Frame = +2
Query: 128 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGA 307
+ V +I + +D VNI A+D+Y P +P A ++ P N ++ D+ ++ W++
Sbjct: 179 YPVQAIADNLDFVNIMAYDFYGPGWSPVTGP-PAALFDPSNPAG-RSGDSGLSKWLEAKL 236
Query: 308 PTHKLVLGISTTGRTWKLDSDSEISG 385
P K VLG S G W L+ D+E +G
Sbjct: 237 PAKKAVLGFSYCGWAWTLE-DAENNG 261
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 49.6 bits (113), Expect = 9e-07
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Frame = +2
Query: 23 EGFTALVREMKQALNV------KPNMQLVISVLPNVNS-SIYFDVPSIINLVDIVNIQAF 181
+ F L+RE + A+ KP + L +V + + S+ V ++ + +D VN+ A+
Sbjct: 147 DNFGKLLREWRLAVEAEARSSGKPRLLLTAAVFYSYSYYSVLHPVNAVADSLDWVNLVAY 206
Query: 182 DYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKL 361
D+Y + + AP+Y P P + DA + W Q G P K VLG G W L
Sbjct: 207 DFYE-SGSSRVTCSPAPLYDPITTGP--SGDAGVRAWTQAGLPAKKAVLGFPLYGYAWCL 263
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 46.8 bits (106), Expect = 6e-06
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +2
Query: 56 QALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYY--TPERNPKEADYTA 229
Q ++P + + +S+ + V +I +D VN+ A+++Y T E P A
Sbjct: 137 QRTGIRPLLLTAAVYYTSDYNSVSYPVQAINRSLDWVNLIAYEFYGLTTEIGPP-----A 191
Query: 230 PIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 376
+Y P + P D + +W++ G P K V G G +W LD D +
Sbjct: 192 GLYDPSIKGPC--GDTGLKHWLKAGLPEKKAVFGFPYVGWSWTLDDDKD 238
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 46.4 bits (105), Expect = 9e-06
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 7/134 (5%)
Frame = +2
Query: 5 KESEHREGFTALVREMKQALNVKPNMQLVISVLPNVN---SSIYFDVP----SIINLVDI 163
+ E F L+ E + A+ + N +++ SS Y VP +I N +D
Sbjct: 122 RNEEEMYDFGKLLEEWRSAVEAESNSSGTTALILTAAVYYSSNYQGVPYPVLAISNSLDW 181
Query: 164 VNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTT 343
+N+ A+D+Y P + A +Y P + ++ D+ + W + G P K VLG
Sbjct: 182 INLMAYDFYGPGWSTVTGP-PASLYLPTDG---RSGDSGVRDWTEAGLPAKKAVLGFPYY 237
Query: 344 GRTWKLDSDSEISG 385
G W L +D +++G
Sbjct: 238 GWAWTL-ADPDVNG 250
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 45.6 bits (103), Expect = 1e-05
Identities = 29/85 (34%), Positives = 39/85 (45%)
Frame = +2
Query: 107 NVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAIN 286
N N +Y V I L+D VNI+A+D+Y P + T P A + + D+ +
Sbjct: 77 NYNGVVY-PVKFISELLDWVNIKAYDFY----GPGCTEVTGPPAALYLQSDGPSGDSGVK 131
Query: 287 YWIQNGAPTHKLVLGISTTGRTWKL 361
WI G P K VLG G W L
Sbjct: 132 DWIDAGLPAEKAVLGFPYYGWAWTL 156
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 44.0 bits (99), Expect = 5e-05
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Frame = +2
Query: 23 EGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTPER 202
E + A V E N P + + + V +I + +D VNI A+D+Y P
Sbjct: 152 EEWRAAVVEESDKTNQLPLLLTAAVYYSPQYDGVEYPVKAIADNLDFVNIMAYDFYGPGW 211
Query: 203 NPKEADYTAPIYAPQNRDPLQNADAAINYWIQNG-APTHKLVLGISTTGRTWKLDSDSEI 379
+P A + P N ++ ++ + W+ P K VLG G W L+ D+E
Sbjct: 212 SPVTGPPAALFHDPSN-PAGRSGNSGLRKWLDEAKLPPKKAVLGFPYCGWAWTLE-DAEN 269
Query: 380 SG 385
+G
Sbjct: 270 NG 271
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 43.2 bits (97), Expect = 8e-05
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 110 VNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQN-RDPLQNADAAIN 286
V S+ + + I +D VN+ A+D+Y+ A ++ P N + P D +
Sbjct: 174 VYDSVSYPIREIKKKLDWVNLIAYDFYSSSTT---IGPPAALFDPSNPKGPC--GDYGLK 228
Query: 287 YWIQNGAPTHKLVLGISTTGRTWKLDSDSE 376
WI+ G P K VLG G TW L S ++
Sbjct: 229 EWIKAGLPAKKAVLGFPYVGWTWSLGSGND 258
>At1g30220.1 68414.m03697 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 580
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 255 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 365
++Y +PT++ + GF R LSLV+A L+ GS I
Sbjct: 294 VMYYSPTIVQLAGFASNRTALLLSLVTAGLNAFGSII 330
>At5g42390.1 68418.m05161 metalloendopeptidase identical to
chloroplast processing enzyme metalloendopeptidase
[Arabidopsis thaliana] gi|2827039|gb|AAC39482
Length = 1265
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -1
Query: 184 VKCLDVDNVDQVYDAWDVKVNGAIYVWQNADN*LHIGFYIECLF 53
+K DVD + + ++ W N +Y+ + DN I IE +F
Sbjct: 358 IKKWDVDKIRKFHERWYFPANATLYIVGDIDNIPRIVHNIEAVF 401
>At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 888
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 14 EHREGFTALVREMKQALNVKPNMQLVISVLPNVNS 118
EH T+ +R+ + AL+V PN Q ++ + VNS
Sbjct: 851 EHIGDVTSALRDCRAALSVDPNHQEMLELHSRVNS 885
>At1g50790.1 68414.m05712 hypothetical protein
Length = 812
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/73 (20%), Positives = 32/73 (43%)
Frame = +2
Query: 74 PNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNR 253
P ++++PN + + I + +V I + ++Y P R + ++ P NR
Sbjct: 339 PEKATWVTLVPNRDDE-FISFARCIMVSQLVGIDSLEHYYPNRVASQFGRLQDVHCPVNR 397
Query: 254 DPLQNADAAINYW 292
+ L A +Y+
Sbjct: 398 NNLSREAAWNDYY 410
>At2g33570.1 68415.m04114 expressed protein
Length = 496
Score = 27.1 bits (57), Expect = 5.6
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 266 FVEDRGSAVRKSVQCSPPLWGYVQVYNSQMPGC 168
++ + G+++R Q P WGY +VY + C
Sbjct: 147 WISNNGTSIRAKAQKILPDWGYGRVYTVVVVNC 179
>At2g43330.1 68415.m05388 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens], SP|Q01440 Membrane transporter D1
{Leishmania donovani}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 509
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +3
Query: 255 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 365
++Y +PT++ + GF +L LSL+ A ++ G+ +
Sbjct: 294 VMYYSPTIVQMAGFHSNQLALFLSLIVAAMNAAGTVV 330
>At5g17920.1 68418.m02101
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase / vitamin-B12-independent methionine
synthase / cobalamin-independent methionine synthase
(CIMS) identical to SP|O50008
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent
methionine synthase isozyme) (Cobalamin-independent
methionine synthase isozyme) {Arabidopsis thaliana}
Length = 765
Score = 26.2 bits (55), Expect = 9.8
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 266 NADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAG 424
+AD + W Q A K + + LD+ + + VPP + GGE G
Sbjct: 38 SADLRSSIWKQMSAAGTKFIPSNTFAHYDQVLDTTAMLGAVPPRYGYTGGEIG 90
>At3g05140.1 68416.m00558 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 460
Score = 26.2 bits (55), Expect = 9.8
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +2
Query: 242 PQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPI 397
P NR+ + NADA + +N H+ + WK S +S PP+
Sbjct: 48 PPNREAIDNADADTDVQCKN----HRASSNWGKFFKLWKRRSMKRLSSFPPL 95
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,761,055
Number of Sequences: 28952
Number of extensions: 197191
Number of successful extensions: 628
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 702840360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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