Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_D12
         (343 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0HB59 Cluster: Efflux transporter, RND family, MFP sub...    31   3.8  
UniRef50_A5AG29 Cluster: Putative uncharacterized protein; n=1; ...    31   5.0  
UniRef50_Q8XQ70 Cluster: Probable transmembrane protein; n=5; Ra...    31   6.7  
UniRef50_Q8DLU9 Cluster: Tlr0377 protein; n=1; Synechococcus elo...    31   6.7  
UniRef50_Q6NF39 Cluster: Putative surface anchored protein; n=1;...    31   6.7  
UniRef50_A6E8U3 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_UPI0000ECB32B Cluster: Uncharacterized protein C1orf177...    30   8.8  
UniRef50_Q9KQW8 Cluster: Rec2-related protein; n=18; Vibrio chol...    30   8.8  
UniRef50_Q69HL6 Cluster: Polydomain protein-like; n=1; Ciona int...    30   8.8  
UniRef50_Q5CW67 Cluster: 11x WD40 repeats containing protein of ...    30   8.8  

>UniRef50_A0HB59 Cluster: Efflux transporter, RND family, MFP
           subunit precursor; n=3; Burkholderiales|Rep: Efflux
           transporter, RND family, MFP subunit precursor -
           Comamonas testosteroni KF-1
          Length = 407

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +3

Query: 168 TLNHQNGPIGNYEPISTGPAFVYFISSQLSTQAMRRPLS 284
           TL   NG +    P+S G A  Y + + LS + MRR LS
Sbjct: 188 TLQEANGALARLRPVSGGQAGEYELLAPLSGRVMRRHLS 226


>UniRef50_A5AG29 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 780

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -3

Query: 236 IDERRSSAYGFIISDRTVLMVESKKEIRVSRTTNCGHYTRPMEHQL 99
           +DE   S+YG   S   +L  ES++E   S   +C   +RPM+H++
Sbjct: 639 VDEYIRSSYGLYQSSVQILETESERESDASNAWSC---SRPMDHKV 681


>UniRef50_Q8XQ70 Cluster: Probable transmembrane protein; n=5;
           Ralstonia|Rep: Probable transmembrane protein -
           Ralstonia solanacearum (Pseudomonas solanacearum)
          Length = 537

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 198 FR*DRFDG*E*ERDPGVANNKLWSLYASDGTP-AIVHHVNS 79
           F   R  G + ++ PG  ++ LWS YA+ G P A V HV +
Sbjct: 251 FHRPRAIGADQDQAPGATDSALWSAYAAAGLPDAFVRHVQA 291


>UniRef50_Q8DLU9 Cluster: Tlr0377 protein; n=1; Synechococcus
           elongatus|Rep: Tlr0377 protein - Synechococcus elongatus
           (Thermosynechococcus elongatus)
          Length = 536

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = +3

Query: 33  FRVFLLRRIGHGCRRQSSRGGQ*LVFHRTRIVTTVCCSRHPDLFLTLNHQNGPIGN--YE 206
           F   +   I HG R   +R    L FH  R + ++   + P L     H     GN  YE
Sbjct: 312 FNTMMRFAIKHGSRHNEARNLYNLAFHYRRFIESLVHYQRPHLTQKCVHHLRTYGNEVYE 371

Query: 207 PISTGPAFVYFI 242
              + PA +YFI
Sbjct: 372 LAQSSPA-LYFI 382


>UniRef50_Q6NF39 Cluster: Putative surface anchored protein; n=1;
           Corynebacterium diphtheriae|Rep: Putative surface
           anchored protein - Corynebacterium diphtheriae
          Length = 623

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = -2

Query: 180 DG*E*ERDPGVANNKLWSLYASDGTPAIVHH---VNSV-CGSHGQY 55
           DG + + +PG+A  KLW LY  DG P    H   V SV  G  G+Y
Sbjct: 406 DGRQDDNEPGLAGVKLW-LYGPDGGPVTDVHGKVVKSVTTGEDGKY 450


>UniRef50_A6E8U3 Cluster: Putative uncharacterized protein; n=1;
           Pedobacter sp. BAL39|Rep: Putative uncharacterized
           protein - Pedobacter sp. BAL39
          Length = 348

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -3

Query: 242 YEIDERRSSAYGFIISDRTVLMVESKKEIRVSRTTN 135
           Y I   R S YG+I S +   M E K+E R+S T N
Sbjct: 107 YAIPAERKSRYGWIRSVQVTQMKEGKREGRLSYTAN 142


>UniRef50_UPI0000ECB32B Cluster: Uncharacterized protein C1orf177.;
           n=2; Gallus gallus|Rep: Uncharacterized protein
           C1orf177. - Gallus gallus
          Length = 343

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 29  KLSCFSSSPYWPWLPQTEFTWWTIAGVPSDAY 124
           K  CFS+ P  P  P     W T++  P DAY
Sbjct: 193 KKGCFSTLPRNPGCPTERIFWATLSQCPRDAY 224


>UniRef50_Q9KQW8 Cluster: Rec2-related protein; n=18; Vibrio
          cholerae|Rep: Rec2-related protein - Vibrio cholerae
          Length = 752

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 47 SSPYWPWLPQTEFTW 91
          S+PYWPW+P   + W
Sbjct: 24 SAPYWPWMPSWGWAW 38


>UniRef50_Q69HL6 Cluster: Polydomain protein-like; n=1; Ciona
            intestinalis|Rep: Polydomain protein-like - Ciona
            intestinalis (Transparent sea squirt)
          Length = 1969

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -2

Query: 93   HHVNSVCGSHGQYGEEEKHESFHCRIVF 10
            +H  ++CGS+GQ+  +  +   HC ++F
Sbjct: 1677 NHTTTICGSNGQWTNQAPYCRGHCDVIF 1704


>UniRef50_Q5CW67 Cluster: 11x WD40 repeats containing protein of
           plant origin; n=2; Cryptosporidium|Rep: 11x WD40 repeats
           containing protein of plant origin - Cryptosporidium
           parvum Iowa II
          Length = 1097

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = -2

Query: 126 LYASDGTPAIVHHVNSVCG 70
           +Y+ +G P+IVH+V ++CG
Sbjct: 78  VYSGEGIPSIVHYVTAICG 96


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,993,441
Number of Sequences: 1657284
Number of extensions: 7409563
Number of successful extensions: 19779
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19775
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10275329640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)