Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_D10
         (405 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   3.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   8.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   8.0  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    20   8.0  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 162 LSVFRLTRVTSSSVKLYNDLF 100
           + V +L+R+    V L+ND+F
Sbjct: 216 IEVRKLSRLLGEMVGLFNDIF 236


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -1

Query: 147 LTRVTSSSVKLYNDLF 100
           L+++ S +V L+ND+F
Sbjct: 224 LSQLLSETVALFNDVF 239


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -1

Query: 147 LTRVTSSSVKLYNDLF 100
           L+++ S +V L+ND+F
Sbjct: 224 LSQLLSETVALFNDVF 239


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 153 KRKAISSHQDYQHGRL 200
           +RKA  S +D QH R+
Sbjct: 84  RRKAPQSFEDIQHQRV 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,645
Number of Sequences: 336
Number of extensions: 1634
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)