Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_D07
         (631 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7ZVB1 Cluster: Charged multivesicular body protein 1b;...    36   1.1  
UniRef50_Q0DGF7 Cluster: Os05g0534900 protein; n=3; Oryza sativa...    34   3.2  
UniRef50_Q7T9Q2 Cluster: ORF_113; n=1; Adoxophyes orana granulov...    32   9.9  

>UniRef50_Q7ZVB1 Cluster: Charged multivesicular body protein 1b;
           n=13; Coelomata|Rep: Charged multivesicular body protein
           1b - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 199

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +2

Query: 497 SQTEHLFNLKFAVKELERNS 556
           S  +HLFNLKFA KEL+RNS
Sbjct: 3   SMEKHLFNLKFAAKELQRNS 22


>UniRef50_Q0DGF7 Cluster: Os05g0534900 protein; n=3; Oryza
           sativa|Rep: Os05g0534900 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 882

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +1

Query: 58  NKLGLSTCAILYKVSSKPSNWVTKCHHLQWRVSF*ETFLL*KYPYSTLIVVA-IADYCYS 234
           + L L    ++  +S+   N   KCHH++W      + L   +P + +I+ A I+ YC++
Sbjct: 495 HSLALKLGLLVDFISASLVNMYAKCHHIEWASQLFSSTL---FPRNLVIINAMISGYCWN 551

Query: 235 LIKLNLVLLF 264
            +    +LLF
Sbjct: 552 SLPQKALLLF 561


>UniRef50_Q7T9Q2 Cluster: ORF_113; n=1; Adoxophyes orana
           granulovirus|Rep: ORF_113 - Adoxophyes orana
           granulovirus (AoGV)
          Length = 302

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 11/29 (37%), Positives = 22/29 (75%)
 Frame = +3

Query: 426 KPKILYELCLSYHSYNV*HKMLNSVKQNI 512
           K +ILYELC++Y+ Y+   +++N + Q++
Sbjct: 173 KLQILYELCINYNGYDATKEIMNIINQSV 201


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,993,083
Number of Sequences: 1657284
Number of extensions: 6453140
Number of successful extensions: 12745
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12742
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)