Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_D05
(388 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31891| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_31211| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 8e-06
SB_9542| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.25
SB_4864| Best HMM Match : zf-CCHC (HMM E-Value=6.9e-07) 31 0.33
SB_49535| Best HMM Match : RVT_1 (HMM E-Value=5.1e-32) 29 1.3
SB_19811| Best HMM Match : RVT_1 (HMM E-Value=3.5e-32) 29 1.3
SB_19356| Best HMM Match : Cucumo_2B (HMM E-Value=7.3) 29 1.3
SB_41052| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_53886| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-08) 29 1.8
SB_32363| Best HMM Match : IBN_N (HMM E-Value=0.00068) 28 2.3
SB_4328| Best HMM Match : Vicilin_N (HMM E-Value=0.39) 28 2.3
SB_59611| Best HMM Match : zf-CCHC (HMM E-Value=7.7e-05) 28 3.1
SB_57835| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_56918| Best HMM Match : zf-CCHC (HMM E-Value=7.4e-07) 28 3.1
SB_56534| Best HMM Match : RVT_1 (HMM E-Value=5.5e-28) 28 3.1
SB_53393| Best HMM Match : RVT_1 (HMM E-Value=5.8e-30) 28 3.1
SB_21600| Best HMM Match : zf-CCHC (HMM E-Value=6.9e-07) 28 3.1
SB_13324| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_46816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_37609| Best HMM Match : Extensin_2 (HMM E-Value=0.081) 28 3.1
SB_31771| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_30012| Best HMM Match : Retrotrans_gag (HMM E-Value=1.1) 28 3.1
SB_24581| Best HMM Match : zf-CCHC (HMM E-Value=6.9e-07) 28 3.1
SB_21743| Best HMM Match : rve (HMM E-Value=4e-17) 28 3.1
SB_10988| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_40536| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00014) 27 4.0
SB_6911| Best HMM Match : Ank (HMM E-Value=0) 27 5.3
SB_8223| Best HMM Match : RVT_1 (HMM E-Value=4e-27) 27 5.3
SB_28305| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0054) 27 7.1
SB_23399| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_30271| Best HMM Match : CM_2 (HMM E-Value=9.5) 26 9.3
SB_22726| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.3
SB_4940| Best HMM Match : DUF755 (HMM E-Value=2.3) 26 9.3
SB_1611| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.3
SB_21069| Best HMM Match : KE2 (HMM E-Value=0.59) 26 9.3
SB_717| Best HMM Match : Glyco_hydro_63 (HMM E-Value=0.00015) 26 9.3
>SB_31891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 56.0 bits (129), Expect = 1e-08
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Frame = +2
Query: 80 DLLRISEEMFNADINNAFNYIQVSL--QGKTSPMSKNDEASSNLLN-VPENVWSGPTIRP 250
+L + ++M+ AD N + ++ QGKT S++D+AS L V PT
Sbjct: 2 ELSHVCDQMWKADSNRLVPEVDYAIDPQGKTRFHSRSDQASDPLFTWVNPEALRKPTYDA 61
Query: 251 FVALFDNYHKNVIRPEFVTPNEETEQTTYINTILATGPIRTLMNFL 388
FV L DNY +PE V E E +I+ I TGP+ FL
Sbjct: 62 FVKLLDNYASETGKPEVVNQEEINENRVFIDRIYDTGPMEIAHKFL 107
>SB_31211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 46.4 bits (105), Expect = 8e-06
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +2
Query: 98 EEMFNADINNAFNYIQ--VSLQGKTSPMSKNDEASSNLLN-VPENVWSGPTIRPFVALFD 268
+ +F ADIN ++ + +SLQ T P ++D A L V E T ALFD
Sbjct: 13 QRLFQADINRLYHGVDYNISLQNHTRPSMRDDVAPLPLFTWVNETRLKHTTFSSMEALFD 72
Query: 269 NYHKNVIRPEFVTPNEETEQTTYINTILATGPIRTLMNFL 388
NY E + E E+ +I ++AT ++ N+L
Sbjct: 73 NYFLYTGNKEHESKQEREEKKGFIEAVMATDVMKLTHNYL 112
>SB_9542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 31.5 bits (68), Expect = 0.25
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Frame = +2
Query: 176 SKNDEA--SSNLLN----VPENVW--SGPTIRPFVALFDNYHKNVIRPEFVTPNEETEQT 331
+K DE S N+ N V N W S T F+ L DNY ++ PEF T + T+Q+
Sbjct: 10 NKRDEPYISLNITNLTTTVTVNTWDLSVKTSLGFIQLIDNYFQDPKGPEFPTKLKNTQQS 69
Query: 332 TYIN 343
+N
Sbjct: 70 VRVN 73
>SB_4864| Best HMM Match : zf-CCHC (HMM E-Value=6.9e-07)
Length = 426
Score = 31.1 bits (67), Expect = 0.33
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -1
Query: 388 KEIHKGTNRSGGEYSVDVRCLLCFFVG-----RDEFWSDHIFM 275
K++H+ GG Y D C+F+G DEFWS + +
Sbjct: 291 KQVHEVNREEGGSYQEDYYLDDCYFMGEVSTTNDEFWSAEVLI 333
>SB_49535| Best HMM Match : RVT_1 (HMM E-Value=5.1e-32)
Length = 991
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 388 KEIHKGTNRSGGEYSVDVRCLLCFFVG-----RDEFWSDHIFM 275
K++H+ G Y D C+F+G DEFWS + +
Sbjct: 132 KQVHEVNREEEGSYQEDYYLDYCYFMGEVSTTNDEFWSAEVLI 174
>SB_19811| Best HMM Match : RVT_1 (HMM E-Value=3.5e-32)
Length = 670
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -1
Query: 388 KEIHKGTNRSGGEYSVDVRCLLCFFVG-----RDEFWSDHIFM 275
K++H+ G Y D C+F+G D+FWS +F+
Sbjct: 224 KQVHEVNREEEGSYQEDYYLDDCYFMGEVSTTNDDFWSAEVFI 266
>SB_19356| Best HMM Match : Cucumo_2B (HMM E-Value=7.3)
Length = 194
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 257 ALFDNYHKNVIRPEFVTPNEETEQTTYINTILATGPIRTLMNFL 388
ALFDNY E + E E+ +I ++AT ++ N+L
Sbjct: 12 ALFDNYFLYTGNKEHESKQEREEKKGFIEAVMATDVMKLTHNYL 55
>SB_41052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -1
Query: 388 KEIHKGTNRSGGEYSVDVRCLLCFFVG-----RDEFWSDHIFM 275
K++H+ G Y D C+F+G D+FWS +F+
Sbjct: 291 KQVHEVNREEEGSYQEDYYLDDCYFMGEVSTTNDDFWSAKVFI 333
>SB_53886| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-08)
Length = 332
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 387 RKFIRVRIGPVASIVLMYVVCSVSSLGVTNSGLITFL 277
R+ R +G + S +L+Y VC+ T + L+TFL
Sbjct: 217 RRVFRSAVGMILSSILLYFVCAAPRY-ATEAALLTFL 252
>SB_32363| Best HMM Match : IBN_N (HMM E-Value=0.00068)
Length = 135
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 288 SDQNSSRPTKKQSRQRTSTLYSPPD 362
S + + RPT +Q R STLY+ PD
Sbjct: 2 SQETTERPTVEQVRSVISTLYNSPD 26
>SB_4328| Best HMM Match : Vicilin_N (HMM E-Value=0.39)
Length = 738
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +1
Query: 286 DQTRIRHAQRRNRADNVHQHYTRHRTYSYPYEFP 387
D + H N DN+H + RH T Y+ P
Sbjct: 262 DSDDLHHVDETNNEDNIHGYDNRHNTSFVYYDEP 295
>SB_59611| Best HMM Match : zf-CCHC (HMM E-Value=7.7e-05)
Length = 314
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 388 KEIHKGTNRSGGEYSVDVRCLLCFFVG-----RDEFWSDHIFM 275
K++H+ G Y D C+F+G DEFWS + +
Sbjct: 32 KQVHEVNREEEGSYQEDYYLDDCYFMGEVSTTNDEFWSAEVLI 74
>SB_57835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 388 KEIHKGTNRSGGEYSVDVRCLLCFFVG-----RDEFWSDHIFM 275
K++H+ G Y D C+F+G DEFWS + +
Sbjct: 265 KQVHEVNREEEGSYQEDYYLDDCYFMGEVITTNDEFWSAEVLI 307
>SB_56918| Best HMM Match : zf-CCHC (HMM E-Value=7.4e-07)
Length = 517
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 388 KEIHKGTNRSGGEYSVDVRCLLCFFVG-----RDEFWSDHIFM 275
K++H+ G Y D C+F+G DEFWS + +
Sbjct: 152 KQVHEVNREEEGSYQEDYYLDDCYFMGEVSTTNDEFWSAEVLI 194
>SB_56534| Best HMM Match : RVT_1 (HMM E-Value=5.5e-28)
Length = 1052
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 388 KEIHKGTNRSGGEYSVDVRCLLCFFVG-----RDEFWSDHIFM 275
K++H+ G Y D C+F+G DEFWS + +
Sbjct: 276 KQVHEVNREEEGSYQEDYYLDDCYFMGEVSTTNDEFWSAEVII 318
>SB_53393| Best HMM Match : RVT_1 (HMM E-Value=5.8e-30)
Length = 1246
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 388 KEIHKGTNRSGGEYSVDVRCLLCFFVG-----RDEFWSDHIFM 275
K++H+ G Y D C+F+G DEFWS + +
Sbjct: 284 KQVHEVNREEEGSYQEDYYLDDCYFMGEVSTTNDEFWSAEVLI 326
>SB_21600| Best HMM Match : zf-CCHC (HMM E-Value=6.9e-07)
Length = 216
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 388 KEIHKGTNRSGGEYSVDVRCLLCFFVG-----RDEFWSDHIFM 275
K++H+ G Y D C+F+G DEFWS + +
Sbjct: 133 KQVHEVNREEEGSYQEDYYLDDCYFMGEVSTTNDEFWSAEVLI 175
>SB_13324| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 222 FSGTFSKLDDASSFFDMG 169
F G S+LDDA ++FD+G
Sbjct: 323 FRGEMSELDDAGTYFDLG 340
>SB_46816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1165
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 388 KEIHKGTNRSGGEYSVDVRCLLCFFVG-----RDEFWSDHIFM 275
K++H+ G Y D C+F+G DEFWS + +
Sbjct: 288 KQVHEVNREEEGSYQEDYYLDDCYFMGEVSTTNDEFWSAEVLI 330
>SB_37609| Best HMM Match : Extensin_2 (HMM E-Value=0.081)
Length = 1617
Score = 27.9 bits (59), Expect = 3.1
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 65 STTDDDLLRISEEMFNADINNAFNYIQVSLQGKTSPMSKND-EASSNLLNVPENVWSGPT 241
S + D +E++ N D N A N I S K SP + + E + ++ P+NV P
Sbjct: 964 SRSQSDDSSSNEQLPNLD-NTASNGIDASAFVKDSPENVSVIERDTLSVSPPKNVSMSPA 1022
Query: 242 IRPFVALFDNY 274
PF A D Y
Sbjct: 1023 PDPFTAQVDPY 1033
>SB_31771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1963
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 388 KEIHKGTNRSGGEYSVDVRCLLCFFVG-----RDEFWSDHIFM 275
K++H+ G Y D C+F+G DEFWS + +
Sbjct: 1019 KQVHEVNREEEGSYQEDYYLDDCYFMGEVSTTNDEFWSAEVLI 1061
>SB_30012| Best HMM Match : Retrotrans_gag (HMM E-Value=1.1)
Length = 306
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 388 KEIHKGTNRSGGEYSVDVRCLLCFFVG-----RDEFWSDHIFM 275
K++H+ G Y D C+F+G DEFWS + +
Sbjct: 82 KQVHEVNREEEGSYQEDYYLDDCYFMGEVSTTNDEFWSAEVLI 124
>SB_24581| Best HMM Match : zf-CCHC (HMM E-Value=6.9e-07)
Length = 469
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 388 KEIHKGTNRSGGEYSVDVRCLLCFFVG-----RDEFWSDHIFM 275
K++H+ G Y D C+F+G DEFWS + +
Sbjct: 277 KQVHEVNREEEGSYQEDYYLDDCYFMGEVSTTNDEFWSAEVLI 319
>SB_21743| Best HMM Match : rve (HMM E-Value=4e-17)
Length = 865
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 388 KEIHKGTNRSGGEYSVDVRCLLCFFVG-----RDEFWSDHIFM 275
K++H+ G Y D C+F+G DEFWS + +
Sbjct: 291 KQVHEVNREEEGSYQEDYYLDDCYFMGEVSTTNDEFWSAEVLI 333
>SB_10988| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 222 FSGTFSKLDDASSFFDMG 169
F G S+LDDA ++FD+G
Sbjct: 187 FRGEMSELDDAGTYFDLG 204
>SB_40536| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00014)
Length = 672
Score = 27.5 bits (58), Expect = 4.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 202 LTKRARERVEWPYNKAVRSAI 264
L KR RE EWP NKA +
Sbjct: 584 LPKRTREESEWPENKAAEEDV 604
>SB_6911| Best HMM Match : Ank (HMM E-Value=0)
Length = 1961
Score = 27.1 bits (57), Expect = 5.3
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 47 LRQVQDSTTDDDLLRISEEMFNADINNAFNYIQVSLQGKTSPMSK 181
L+++ TDD+L+ I + + + FNY++ +LQ +P+ K
Sbjct: 1911 LKRILVDVTDDELIDIVTILIKGEASRMFNYLR-ALQLPKAPLYK 1954
>SB_8223| Best HMM Match : RVT_1 (HMM E-Value=4e-27)
Length = 1307
Score = 27.1 bits (57), Expect = 5.3
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 65 STTDDDLLRISEEMFNADINNAFNYIQVSLQGKTSPMSKNDEASSNLLNVPENVWSGPT 241
S D+D ++ +F D + +QV+++G SP+S E S++ VP NV+ T
Sbjct: 174 SEGDEDEIQCLH-IFKCDTTSPPILVQVNIEG--SPVSMELETGSSVSIVPRNVYENLT 229
>SB_28305| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0054)
Length = 425
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/68 (22%), Positives = 33/68 (48%)
Frame = +2
Query: 173 MSKNDEASSNLLNVPENVWSGPTIRPFVALFDNYHKNVIRPEFVTPNEETEQTTYINTIL 352
++K D+ +++ N+P N+++ PT++ + + V + E + + T+L
Sbjct: 261 LTKIDQVCASVGNLPCNIFNDPTLQDLARKVNQWIPQVPFSRILPITNEKNEGENMLTLL 320
Query: 353 ATGPIRTL 376
A IR L
Sbjct: 321 ALKKIRCL 328
>SB_23399| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 827
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 288 SDQNSSRPTKKQSRQRTSTLYSPP 359
SD+N+SRPT+ ++ Q S S P
Sbjct: 647 SDENTSRPTRSETCQDLSQFQSTP 670
>SB_30271| Best HMM Match : CM_2 (HMM E-Value=9.5)
Length = 665
Score = 26.2 bits (55), Expect = 9.3
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 6 ASLIMLK-RKATMTCYVKYRILRRTTTCYGLARRCSMRI 119
A +++L K+ CY YR+ CY + RCS++I
Sbjct: 47 AQVVLLNYEKSKYKCYSLYRVSLWYFWCYLILPRCSIQI 85
>SB_22726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 26.2 bits (55), Expect = 9.3
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 65 STTDDDLLRISEEMFNADINNAFNYIQVSLQGKTSPMSKNDEASSNLLNVPENVW 229
S D+D ++ +F D + +QV+++G SP+S E S++ VP NV+
Sbjct: 174 SEGDEDEIQCLH-IFKCDTTSPPILVQVNIEG--SPVSMELETGSSVSIVPRNVY 225
>SB_4940| Best HMM Match : DUF755 (HMM E-Value=2.3)
Length = 173
Score = 26.2 bits (55), Expect = 9.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 286 DQTRIRHAQRRNRADNVHQHYTRHR-TYSYPY 378
+Q RI H +R N HQH+ HR + S PY
Sbjct: 127 NQKRI-HRRRHNHHHRNHQHHYHHRLSSSLPY 157
>SB_1611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 26.2 bits (55), Expect = 9.3
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 15 IMLKRKATMTCYVKYRILR-RTTTCYGLARRCSMRI*TMRSTTSKLACKVKPRPC 176
+ ++ TC K + + + TC A+ C ++ T + CKV+ R C
Sbjct: 17 VQTRKCKVQTCKCKAQTCKGKVQTCKCKAQTCKGKVQTRKCKEQTRKCKVQTRKC 71
>SB_21069| Best HMM Match : KE2 (HMM E-Value=0.59)
Length = 341
Score = 26.2 bits (55), Expect = 9.3
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 15 IMLKRKATMTCYVKYRILR-RTTTCYGLARRCSMRI*TMRSTTSKLACKVKPRPC 176
+ ++ TC K + + + TC A+ C ++ T + CKV+ R C
Sbjct: 17 VQTRKCKVQTCKCKAQTCKGKVQTCKCKAQTCKGKVQTRKCKEQTRKCKVQTRKC 71
>SB_717| Best HMM Match : Glyco_hydro_63 (HMM E-Value=0.00015)
Length = 1052
Score = 26.2 bits (55), Expect = 9.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 328 LLCFFVGRDEFWSDHIFMIVVK*RYERPYC 239
LL + + DEF SD V + +RPYC
Sbjct: 819 LLAYMMDEDEFLSDFGVRSVSRYHLKRPYC 848
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,213,745
Number of Sequences: 59808
Number of extensions: 209862
Number of successful extensions: 1430
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1427
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 669365910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -