Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_D05
         (388 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   3.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   3.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   3.7  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   4.9  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   4.9  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          20   8.6  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    20   8.6  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     20   8.6  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 376 KGTNRSGGEYSVDVRCLLCFFVGRDEFWS 290
           KG  + GG Y + ++CL    +    FWS
Sbjct: 372 KGLLKGGGGYLLGIQCLTVVCLA---FWS 397


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = +2

Query: 260 LFDNYHKNVIRPEFVTP 310
           +FD+  +  +RP +++P
Sbjct: 608 IFDSASRTAVRPRYISP 624


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = +2

Query: 260 LFDNYHKNVIRPEFVTP 310
           +FD+  +  +RP +++P
Sbjct: 698 IFDSASRTAVRPRYISP 714


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 278 KNVIRPEFVTPNEETEQTTYINTILATG 361
           +N++    V    +  QTTY+   +ATG
Sbjct: 192 RNMVPENLVQACFQQAQTTYVTKEVATG 219


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 71  TDDDLLRISEEMFNADINNA 130
           T +DLL    +M+   +NNA
Sbjct: 455 TIEDLLHFCRQMYAMKVNNA 474


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = +2

Query: 275 HKNVIRPEFVTPNEETEQTTYI 340
           HK ++  E + PN       YI
Sbjct: 75  HKGIVYFELLPPNRTINSVVYI 96


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 261 SATNGLIVGPLHTFSGTFSKLDDAS 187
           +AT+G  V  ++ F  + SK+DD +
Sbjct: 53  NATDGPAVVRVNIFVRSISKIDDVT 77


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 10/39 (25%), Positives = 15/39 (38%)
 Frame = +2

Query: 29  KSYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQ 145
           + YD  L        +  +  +    F  DIN   NY+Q
Sbjct: 296 REYDRELEDFDGRLFEFPIKFVPSYPFEEDINEGSNYMQ 334


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,141
Number of Sequences: 438
Number of extensions: 1960
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9391092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)