Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_D04
(692 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1152 + 9170628-9171899 61 9e-10
01_06_0824 - 32243495-32244319,32244449-32244859 56 3e-08
11_01_0771 + 6453130-6454488 48 7e-06
11_02_0011 - 7337618-7338496,7338596-7338991 47 1e-05
11_02_0012 - 7346282-7347136,7347234-7347593 46 3e-05
11_01_0767 + 6438648-6438809,6439146-6440000 45 5e-05
11_01_0750 - 6315126-6315896,6316371-6316784 44 1e-04
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 43 3e-04
11_02_0014 - 7352619-7352918,7353173-7353418 41 8e-04
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 39 0.004
05_06_0044 - 25150322-25151260 31 0.66
05_07_0209 + 28420008-28421510 30 2.0
10_05_0047 + 8524345-8524414,8524687-8524776,8525004-8525306,852... 28 6.1
01_06_1630 + 38753016-38753209,38753904-38754039,38754291-387544... 28 6.1
12_01_1080 + 11241590-11241625,11241723-11242018,11242113-112422... 28 8.1
06_01_1101 - 9044679-9045320,9045484-9045890,9046020-9046274,904... 28 8.1
02_05_0622 + 30437533-30437577,30437694-30438177,30438301-304383... 28 8.1
>01_01_1152 + 9170628-9171899
Length = 423
Score = 60.9 bits (141), Expect = 9e-10
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Frame = +2
Query: 200 GKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEA-TNPYISLSKTFSEMN 376
G+ +N + SPL + L GA ++ E+ FLG +E +P L +
Sbjct: 56 GQGRNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLP 115
Query: 377 PDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETIDFS-DTKKAADIINQWANEKTRGH 553
F + G T + ++SR Y + E DF+ ++A + +N + ++ T G
Sbjct: 116 NTSFACGVWVDRGRALTPEFADAAASR-YAAVAEPADFATQPEQARERVNAFVSDATEGL 174
Query: 554 IXSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDFHV 685
I + +++D + L N + F+G W +PF+ S T FH+
Sbjct: 175 IRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHL 218
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 56.0 bits (129), Expect = 3e-08
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 10/172 (5%)
Frame = +2
Query: 200 GKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVD--YSEATNPYISLSKTFSEM 373
G DKN+ SPL + + L +GA + +I FLG A +++L +
Sbjct: 29 GGDKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDS 88
Query: 374 NPDF------FTMANKIYVGNKYTLDEKFTSS-SRQYQSEVETIDFSDT-KKAADIINQW 529
P AN ++V L + + +Y++E + F D ++A IN+W
Sbjct: 89 GPGDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEW 148
Query: 530 ANEKTRGHIXSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDFHV 685
T G I + D +D A L N ++F+G W F+A T F++
Sbjct: 149 FESATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYL 200
>11_01_0771 + 6453130-6454488
Length = 452
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +2
Query: 500 KKAADIINQWANEKTRGHIXSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDF 679
++A IN WA T I + ++ P A L N I+F+G W PFN S+T +K F
Sbjct: 171 EEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPF 230
Query: 680 H 682
+
Sbjct: 231 Y 231
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 47.2 bits (107), Expect = 1e-05
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Frame = +2
Query: 206 DKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLG-----DVDYSEATNPYISLSKTFSE 370
+KN+V SP + + L +GA + E+ LG D++ S + L+ +
Sbjct: 30 NKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADESAS 89
Query: 371 MNPDFFTMANKIYVGNKYTLDEK---FTSSSRQYQSEVETIDFS-DTKKAADIINQWANE 538
P +++ V + TL+ K +++ Y++ +F K++ IN+W ++
Sbjct: 90 GGP---RVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSK 146
Query: 539 KTRGHIXSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDFH 682
T I + D ++ + A L N I+F+G W PF S T FH
Sbjct: 147 ATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFH 194
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 46.0 bits (104), Expect = 3e-05
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 6/178 (3%)
Frame = +2
Query: 167 SMKLLKEAYTSG--KDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDV---DYSEA 331
+++L K G ++NVV SP+ + + L SGA + E+ LG D E+
Sbjct: 15 ALRLAKRLADDGDNSNRNVVFSPVSLYAALALVASGARGTTLDELVALLGAASLDDLEES 74
Query: 332 TNPYISLSKTF-SEMNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETIDFSDTKKA 508
+ + SE + A ++ + L + ++ Q Q + S KK
Sbjct: 75 VRRAVEVGLADESESGGPRVSYACGVWHDERLALKPAYRAADFQRQPK------SSRKK- 127
Query: 509 ADIINQWANEKTRGHIXSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDFH 682
IN+W ++ T I + D ++ A L N I+F+G W PF T FH
Sbjct: 128 ---INKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFH 182
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 461 YQSEVETIDFSDTK-KAADIINQWANEKTRGHIXSPISDDTIDPNAAAALFNVIFFQGHW 637
Y+ T+DF + +A IN W T+ I I ++ + + N I+F+G W
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEW 101
Query: 638 HVPFNASETIKKDF 679
PF+ S+T +++F
Sbjct: 102 LAPFDKSDTAEREF 115
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +2
Query: 395 ANKIYVGNKYTLDEKFTS-SSRQYQSEVETIDFSDTKK-AADIINQWANEKTRGHIXSPI 568
A ++ +L +F + Y S + DF + + A D IN W + T+G + + +
Sbjct: 103 AGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLL 162
Query: 569 SDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDFH 682
TID N L + ++F+G W + T ++ F+
Sbjct: 163 PAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFY 200
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +2
Query: 476 ETIDFSDTKKAADI---INQWANEKTRGHIXSPISDDTIDPNAAAALFNVIFFQGHWHVP 646
E I + KAA++ +N W + T G I + ++D L N ++F+G W
Sbjct: 200 EPITHWTSGKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEK 259
Query: 647 FNASETIKKDFHV 685
F+AS+T +FH+
Sbjct: 260 FDASKTKDGEFHL 272
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 518 INQWANEKTRGHIXSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDFHV 685
+N W + T G I + + +I+ N L N ++F+G W F+ S+T +FH+
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHL 524
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Frame = +2
Query: 200 GKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEATNPY------ISLSKT 361
G +NV SPL + + + L +GAG +R ++ LG +E + + + L+
Sbjct: 32 GAGRNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADA 91
Query: 362 FSEMNPDFFTMANKIYVGNKYTLDEKFTS-SSRQYQSEVETIDF 490
P A+ ++V +L + F + +Y++E ++DF
Sbjct: 92 SGAGGPR-VAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDF 134
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +2
Query: 494 DTKKAADIINQWANEKTRGHIXSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKK 673
+ KK+ IN+W ++ T I + D ++ L N I+F+G W PF T
Sbjct: 82 EPKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTG 141
Query: 674 DFH 682
FH
Sbjct: 142 KFH 144
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +2
Query: 503 KAADIINQWANEKTRGHIXSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDFH 682
+ A +N W + T G I + ++D L N ++F+G W F+AS+T +F
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFR 63
Query: 683 V 685
+
Sbjct: 64 L 64
>05_06_0044 - 25150322-25151260
Length = 312
Score = 31.5 bits (68), Expect = 0.66
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 11/67 (16%)
Frame = +2
Query: 518 INQWANEKTRGHIXSPIS---DDTIDPN--------AAAALFNVIFFQGHWHVPFNASET 664
IN+W + +T G + +S DD D + A+ L N ++F +W PF T
Sbjct: 40 INEWFSSQTGGFVKDILSNSIDDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLT 99
Query: 665 IKKDFHV 685
+ DFHV
Sbjct: 100 EEGDFHV 106
>05_07_0209 + 28420008-28421510
Length = 500
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +2
Query: 281 SRVEIDKFLGDVDYSEATN---PYISLSKTFSEMNPDFFTMANKIYVGNKYTLDEKFTSS 451
S +++ + L D D + A + P + + MNP FT+ + NK +L E+FT+S
Sbjct: 279 SVLQLHRLLVDQDAAAAASFPAPIDGVLDWVASMNPRVFTVVEQEADHNKSSLLERFTNS 338
Query: 452 SRQYQSEVETID 487
Y S ++++
Sbjct: 339 LFYYASMFDSLE 350
>10_05_0047 +
8524345-8524414,8524687-8524776,8525004-8525306,
8525413-8525872,8525962-8526043,8526157-8526351
Length = 399
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 314 VDYSEATNPYISLSKTFSEMNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETI 484
++ E N K E N D T NK+ ++ T +EK S+ R+ + + E I
Sbjct: 331 MELKEGDNSERKREKALEEYN-DEITRINKVAAASRLTAEEKRRSAERKVREKAERI 386
>01_06_1630 +
38753016-38753209,38753904-38754039,38754291-38754404,
38755053-38755112,38755223-38755252,38755523-38756206
Length = 405
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +3
Query: 393 WPIKSTSEINILWMRNSRALPVSTKARLKLLTSAIPKKQLTSLISG---LMRRPEDILXL 563
W + S +N+ + R S +PV+ L + + +LT I G L+ R E
Sbjct: 266 WQLPDLSSLNLSYNRFSGEIPVNISEMTYLYSIGLQHNKLTGSIPGKFALLSRLESFNVS 325
Query: 564 QSLMTP*IQMQLPRSSMLYSSRVTGTC 644
+L++ I + L + S S G C
Sbjct: 326 DNLLSGPIPVALSKFSTSCFSGNQGLC 352
>12_01_1080 +
11241590-11241625,11241723-11242018,11242113-11242269,
11242381-11242449,11242551-11243480,11243868-11243906,
11244414-11244478,11244663-11244768,11244850-11245050,
11247001-11247201,11247756-11247779,11249425-11249586,
11249676-11249915,11250267-11250479,11250618-11250968,
11251041-11251193,11251649-11251858,11252049-11252267,
11252365-11252482,11252879-11253828,11254023-11254220,
11254294-11254553,11255316-11255505,11255817-11256169,
11258278-11258386,11258466-11258615,11258748-11258844,
11259315-11259415
Length = 2065
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 389 TMANKIYVGNKYTLDEKFTSSSRQYQSEVETIDFSDTKKAADIINQWANEKTRGHIXSPI 568
TM N V + DE+FT+ + YQ+E + + K + + + + + +
Sbjct: 688 TMPNVAAVADWLQKDEEFTAQAALYQTEFRPVPLEEFIKVGNQV--FDKDMNVVRVLPKV 745
Query: 569 SD-DTIDPNAAAALFNVIFFQGH 634
+D DP+ L N + QGH
Sbjct: 746 ADLGGKDPDHIVELCNEVVQQGH 768
>06_01_1101 -
9044679-9045320,9045484-9045890,9046020-9046274,
9046375-9046498,9047237-9047289,9047388-9047648,
9047795-9047848,9047975-9048458,9048554-9048592
Length = 772
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = -2
Query: 682 MEIFLYSLTCVERH----VPVTLEEYNIEERGSCIWIYGVIRDWRXNMSSGLLISPLIND 515
+E+ ++ + V+ H VPVTL I C+W YG + + ++ + + IS L+N
Sbjct: 463 IEVIYFAASLVKFHEGAWVPVTLSF--IFMMVMCVWHYGTKKKYEFDVQNKVSISWLLN- 519
Query: 514 VSCFFGIAEVNSFNL 470
+ GI V L
Sbjct: 520 IGPSLGIVRVRGIGL 534
>02_05_0622 +
30437533-30437577,30437694-30438177,30438301-30438354,
30438565-30438789,30438891-30438943,30439591-30439714,
30439823-30440077,30440171-30440517,30440661-30441266,
30441504-30441546,30441624-30441757
Length = 789
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = -2
Query: 682 MEIFLYSLTCVERH----VPVTLEEYNIEERGSCIWIYGVIRDWRXNMSSGLLISPLIND 515
+E+ +S + V+ H VP+TL I C+W YG I+ + + + + ++ L+N
Sbjct: 453 IEVLYFSASLVKFHEGAWVPITLSF--IFMIVMCVWHYGTIKKYEFDFQNKVSVNWLLN- 509
Query: 514 VSCFFGIAEVNSFNL 470
+ GI V L
Sbjct: 510 LGPSLGIVRVRGIGL 524
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,300,820
Number of Sequences: 37544
Number of extensions: 368628
Number of successful extensions: 980
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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