Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_D04
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 73 1e-13
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 73 1e-13
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 68 6e-12
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 68 6e-12
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 60 1e-09
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 60 1e-09
U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidan... 29 4.2
U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidan... 29 4.2
D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin ... 29 4.2
AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein. 29 4.2
AF016684-12|AAB66204.1| 291|Caenorhabditis elegans Hypothetical... 28 5.5
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z19153-4|CAA79548.1| 525|Caenorhabditis elegans Hypothetical pr... 27 9.6
U53149-4|AAA96120.1| 956|Caenorhabditis elegans Patched related... 27 9.6
L12018-2|AAK68341.1| 525|Caenorhabditis elegans G protein regul... 27 9.6
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 73.3 bits (172), Expect = 1e-13
Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 3/177 (1%)
Frame = +2
Query: 170 MKLLKEAYTSGKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEATNPYIS 349
+KLL + TS + V SP+ +++ + L GA +R +I + + E + S
Sbjct: 17 IKLLSDL-TSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFS 75
Query: 350 -LSKTFSEMNPDFFTM-ANKIYVGNKYTLDEKFTSSSRQ-YQSEVETIDFSDTKKAADII 520
++K + D T+ AN+++V + + + FT R+ Y +E TIDF +++AA I+
Sbjct: 76 FINKLLNSSVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIM 135
Query: 521 NQWANEKTRGHIXSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDFHVDS 691
NQ+ +E T+G I I D + + A L N IFFQG W F E + +F + +
Sbjct: 136 NQFISESTKGKIPDMIKPDNL-KDVDAILINAIFFQGDWRRKF--GEPAESNFSISA 189
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 73.3 bits (172), Expect = 1e-13
Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 3/177 (1%)
Frame = +2
Query: 170 MKLLKEAYTSGKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEATNPYIS 349
+KLL + TS + V SP+ +++ + L GA +R +I + + E + S
Sbjct: 17 IKLLSDL-TSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFS 75
Query: 350 -LSKTFSEMNPDFFTM-ANKIYVGNKYTLDEKFTSSSRQ-YQSEVETIDFSDTKKAADII 520
++K + D T+ AN+++V + + + FT R+ Y +E TIDF +++AA I+
Sbjct: 76 FINKLLNSSVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIM 135
Query: 521 NQWANEKTRGHIXSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDFHVDS 691
NQ+ +E T+G I I D + + A L N IFFQG W F E + +F + +
Sbjct: 136 NQFISESTKGKIPDMIKPDNL-KDVDAILINAIFFQGDWRRKF--GEPAESNFSISA 189
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 68.1 bits (159), Expect = 6e-12
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 4/161 (2%)
Frame = +2
Query: 209 KNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFL--GDVDYS-EATNPYISLSKTFSEMNP 379
++ V SPL + + + L A +R EI K L G D E IS +E
Sbjct: 32 ESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGT 91
Query: 380 DFFTMANKIYVGNKYTLDEKFTSSSRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHI 556
+ +AN I+ +T+ + + + ++ Y + ++F D + +A+ IN + +E T+GHI
Sbjct: 92 EV-NVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHI 150
Query: 557 XSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDF 679
I+ D+I A L N +F+ +W F T K++F
Sbjct: 151 KKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREF 191
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 68.1 bits (159), Expect = 6e-12
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 4/161 (2%)
Frame = +2
Query: 209 KNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFL--GDVDYS-EATNPYISLSKTFSEMNP 379
++ V SPL + + + L A +R EI K L G D E IS +E
Sbjct: 32 ESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGT 91
Query: 380 DFFTMANKIYVGNKYTLDEKFTSSSRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHI 556
+ +AN I+ +T+ + + + ++ Y + ++F D + +A+ IN + +E T+GHI
Sbjct: 92 EV-NVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHI 150
Query: 557 XSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDF 679
I+ D+I A L N +F+ +W F T K++F
Sbjct: 151 KKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREF 191
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 60.5 bits (140), Expect = 1e-09
Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Frame = +2
Query: 206 DKNVVSSPLGVMMLMLLYKSGAGEGSRVEI-DKFLGDVDYSEATNPYISLSKTFSEMNPD 382
++++V SPL + +++ L +G SR +I + L + + +SK
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 383 FFT-MANKIYVGNKYTLDEKFTSSS-RQYQSEVETIDFSDTKKAADIINQWANEKTRGHI 556
+ANK+Y+ +T++ F S++ + Y ++ +++D + T A IN + N T G I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQEINSFVNTATNGKI 139
Query: 557 XSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDF 679
+ + D+I +A A L N I+F+ W F+ ++DF
Sbjct: 140 KNIATQDSIK-DAIALLINSIYFKADWDDKFDGMSVSEQDF 179
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 60.5 bits (140), Expect = 1e-09
Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Frame = +2
Query: 206 DKNVVSSPLGVMMLMLLYKSGAGEGSRVEI-DKFLGDVDYSEATNPYISLSKTFSEMNPD 382
++++V SPL + +++ L +G SR +I + L + + +SK
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 383 FFT-MANKIYVGNKYTLDEKFTSSS-RQYQSEVETIDFSDTKKAADIINQWANEKTRGHI 556
+ANK+Y+ +T++ F S++ + Y ++ +++D + T A IN + N T G I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQEINSFVNTATNGKI 139
Query: 557 XSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDF 679
+ + D+I +A A L N I+F+ W F+ ++DF
Sbjct: 140 KNIATQDSIK-DAIALLINSIYFKADWDDKFDGMSVSEQDF 179
>U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform a protein.
Length = 671
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 350 LSKTFSE-MNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETID 487
L+K+ SE + +F +I V NKY D+K ++S + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
>U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform b protein.
Length = 699
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 350 LSKTFSE-MNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETID 487
L+K+ SE + +F +I V NKY D+K ++S + S+ T D
Sbjct: 622 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 668
>D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin
protein) protein.
Length = 672
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 350 LSKTFSE-MNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETID 487
L+K+ SE + +F +I V NKY D+K ++S + S+ T D
Sbjct: 595 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 641
>AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein.
Length = 672
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 350 LSKTFSE-MNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETID 487
L+K+ SE + +F +I V NKY D+K ++S + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
>AF016684-12|AAB66204.1| 291|Caenorhabditis elegans Hypothetical
protein F45C12.4 protein.
Length = 291
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 437 KFTSSSRQYQSEVETIDFSDTKKAADIINQWANEKTR 547
KFTS +Q + E + ID T+K AD+ QW + T+
Sbjct: 7 KFTSPRKQVKEEFKLID---TQKIADVRIQWFGKFTK 40
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical
protein F55H12.3 protein.
Length = 2972
Score = 27.5 bits (58), Expect = 9.6
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +2
Query: 395 ANKIYVGNKYTL--DEKFTS--SSRQYQSEVETIDFSDTKKAADIINQ---WANEKTRGH 553
+NK V NKY L D TS + R+YQ+ + F D +Q W T G
Sbjct: 732 SNKTPVENKYELTPDNNHTSYGTMRKYQN-LTNFGFGAFCVCGDERSQPDEWICYNTEGL 790
Query: 554 IXSPISDDTIDPNAAAALF 610
+ +PI++ + P A ALF
Sbjct: 791 MTNPINNACMLPEAQDALF 809
>Z19153-4|CAA79548.1| 525|Caenorhabditis elegans Hypothetical
protein C38C10.4 protein.
Length = 525
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 344 ISLSKTFSEMNPDFFTMANKIYV--GNKYTLDEKFTSSSRQYQSEVETIDFS 493
I+ K F+E N + KI + +LDEK+ S R+YQ E IDF+
Sbjct: 169 IAAVKLFNENNTEGAVSETKIMLIEAKCLSLDEKYEESRRKYQ---ECIDFA 217
>U53149-4|AAA96120.1| 956|Caenorhabditis elegans Patched related
family protein 1 protein.
Length = 956
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -2
Query: 688 VHMEIFLYSLTCVERHVPVTLEEYNIEERGSCIWIYGVIRDW 563
+H + L E H+ + E NIE+ S + Y RDW
Sbjct: 650 MHPNATMIWLRAYEHHLETEVHELNIEKPNSTVEWYTRCRDW 691
>L12018-2|AAK68341.1| 525|Caenorhabditis elegans G protein
regulator protein 1 protein.
Length = 525
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 344 ISLSKTFSEMNPDFFTMANKIYV--GNKYTLDEKFTSSSRQYQSEVETIDFS 493
I+ K F+E N + KI + +LDEK+ S R+YQ E IDF+
Sbjct: 169 IAAVKLFNENNTEGAVSETKIMLLEAKCLSLDEKYEESRRKYQ---ECIDFA 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,615,239
Number of Sequences: 27780
Number of extensions: 321496
Number of successful extensions: 947
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -