Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_D02
(475 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0033 + 220125-220190,220274-224445,224863-224949,225048-22... 145 2e-35
01_06_1608 - 38612754-38616947,38617030-38617095 144 2e-35
09_04_0245 + 15995689-15995742,15995979-15996075,15996165-159961... 32 0.21
08_02_0417 - 16904476-16904662,16904846-16905029,16905150-169058... 31 0.47
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 29 1.4
09_04_0118 - 14816587-14816754,14816866-14816994,14817744-148178... 29 1.4
10_06_0188 - 11603941-11604528 28 3.3
05_07_0310 + 29135875-29136052,29136206-29136617,29136723-291368... 28 3.3
02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033 28 3.3
01_01_0762 + 5889925-5890136,5891110-5891273,5891755-5891878,589... 28 3.3
03_06_0074 - 31476094-31476215,31477803-31478238,31478438-314784... 28 4.4
03_01_0378 + 2943605-2943690,2943774-2943920,2944607-2944675,294... 27 5.8
09_04_0191 - 15467697-15467975,15468078-15468275,15468308-15468331 27 7.7
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 27 7.7
>05_01_0033 +
220125-220190,220274-224445,224863-224949,225048-225084,
225296-225356,225666-226918
Length = 1891
Score = 145 bits (351), Expect = 2e-35
Identities = 69/122 (56%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
Frame = +1
Query: 1 FDLAQSNSEHSRHWFFKGKLILDGKEINESLIEMVASTQKTSNDNN-VIKFGDNSSAIKG 177
FD+AQSNSEHSRHWFF GKL++DG+ + +L ++V S K + DNN VI F DNSSAIKG
Sbjct: 311 FDIAQSNSEHSRHWFFNGKLVIDGETMPRTLFQLVKSPLKANPDNNSVIGFNDNSSAIKG 370
Query: 178 FKHTKVRPTNVKAPSQVIQEVVESDIIFTAETHNMPTAVAPFSGATTGTGGRIRDVQGVG 357
+ ++RPT + S + + E DI+FTAETHN P AVAP+ GA TG GGRIRD G
Sbjct: 371 YPANQLRPTVPGSTSPLSVMMRELDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATG 430
Query: 358 RG 363
+G
Sbjct: 431 KG 432
>01_06_1608 - 38612754-38616947,38617030-38617095
Length = 1419
Score = 144 bits (350), Expect = 2e-35
Identities = 69/122 (56%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Frame = +1
Query: 1 FDLAQSNSEHSRHWFFKGKLILDGKEINESLIEMVASTQKTSNDNN-VIKFGDNSSAIKG 177
FD+AQSNSEHSRHWFF GKL++DG+ + ++L ++V S K + DNN VI F DNSSAIKG
Sbjct: 315 FDIAQSNSEHSRHWFFNGKLVIDGETMPKTLFQLVKSPLKANPDNNSVIGFKDNSSAIKG 374
Query: 178 FKHTKVRPTNVKAPSQVIQEVVESDIIFTAETHNMPTAVAPFSGATTGTGGRIRDVQGVG 357
+ ++RPT + S + + E DI+FTAETHN P AVAP+ GA TG GGRIRD G
Sbjct: 375 YPANQLRPTIPGSTSPLSVMMRELDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATG 434
Query: 358 RG 363
+G
Sbjct: 435 KG 436
>09_04_0245 + 15995689-15995742,15995979-15996075,15996165-15996185,
15996442-15996573,15996707-15996834,15996919-15997203,
15997391-15997521,15999700-15999817,16000609-16000703,
16001437-16001511,16001860-16001911,16002767-16002859,
16003625-16003690,16003785-16003867,16003942-16004054,
16005271-16005410,16005569-16005643,16006084-16006160,
16006426-16006514,16008039-16008085,16009004-16009138,
16009298-16009345,16009605-16009667,16009709-16009730,
16010284-16010458,16014250-16014321,16014887-16014958,
16015904-16016005,16016197-16016225,16016333-16016403,
16016549-16016597,16016684-16016784,16017495-16017623,
16017683-16017752,16017975-16018194,16019368-16019389,
16019457-16019604,16021569-16021693,16022344-16022774,
16022984-16023110,16023241-16023292,16023351-16023502
Length = 1461
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +1
Query: 13 QSNSEHSRHWFFKGKLILDGKEINESLIEMVASTQKTSNDNNVIKFGDNSSAIKGFKHTK 192
+ N E + +F +I + + ++ + K +++ V+KF D +S I +K K
Sbjct: 1236 KDNDEEKKETYFATGIIFASGKRSCCVLTTIDDASKRKDESCVVKFFDGTSKIIDWKRIK 1295
Query: 193 VRP 201
VRP
Sbjct: 1296 VRP 1298
>08_02_0417 -
16904476-16904662,16904846-16905029,16905150-16905897,
16906003-16906227,16906318-16906485,16906803-16907453
Length = 720
Score = 31.1 bits (67), Expect = 0.47
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = -3
Query: 395 SPSCPNSAR---GLPLPTP*TSLIRPPVPVVAPLNGATAVGILCVSAVNIISDSTTSCMT 225
SP P SAR P PT T PP P+ +T+V +L ++AV S +T+S
Sbjct: 534 SPQSPVSARTSSATPSPTARTPSPAPPSPIAT--KTSTSV-VLSLAAVRATSPATSSPPR 590
Query: 224 CEGALTLVG 198
+L LVG
Sbjct: 591 ATSSLPLVG 599
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 398 TSPSCPN-SARGLPLPTP*TSLIRPPVPVVAPLNGATAVG 282
TS P+ S G PLPT TSLI+P +P + + G G
Sbjct: 409 TSVELPSASVTGAPLPT--TSLIQPTIPAIGTVPGIQIPG 446
>09_04_0118 -
14816587-14816754,14816866-14816994,14817744-14817824,
14817943-14818047,14818137-14818253,14818335-14818475,
14818965-14819039,14819135-14819236,14819318-14819413,
14819838-14819935,14820056-14820141,14820158-14820231,
14820648-14820758,14821054-14821152,14821941-14822008,
14822855-14822885,14823041-14823148
Length = 562
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +1
Query: 97 EMVASTQKTSNDNNVIKFGDNSSAIKGFKHTKVRPTNVKAPSQVIQEVVESDIIFTAETH 276
E+V S Q D + G+ S A H + R +K + + +++DI+F +T
Sbjct: 285 EIVDSIQARRIDMLFVIGGNGSHAGANAIHEECRKRKLKVSVVAVPKTIDNDILFMDKTF 344
Query: 277 NMPTAV 294
TAV
Sbjct: 345 GFDTAV 350
>10_06_0188 - 11603941-11604528
Length = 195
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 416 AITLDGTSPSCP-NSARGLPLPTP*TSLIRPPVPVVAPLNGATAVGILCVS 267
A DG +P P NSA P P+P + P P A G T+ +CVS
Sbjct: 79 AAAADGWAPFTPFNSA---PTPSPPPATAAAPAPAPARAGGPTSRKKMCVS 126
>05_07_0310 +
29135875-29136052,29136206-29136617,29136723-29136867,
29137944-29138102,29138183-29138242,29138349-29138546
Length = 383
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +1
Query: 295 APFSGATTGTGGRIRDVQGVGRGRPRAEFGHEGE 396
AP GA G GR R GRG PR +FG EG+
Sbjct: 68 APRDGAGRGGPGRGRGGGRGGRGGPRRDFG-EGD 100
>02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033
Length = 1614
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 398 TSPSCPNSARGLPLPTP*TSLIRP--PVPVVAPLNG 297
TSP+ +SA LP P+P S I P P+ AP G
Sbjct: 1158 TSPAVCSSAIHLPRPSPFVSPISSGLPAPIAAPAKG 1193
>01_01_0762 +
5889925-5890136,5891110-5891273,5891755-5891878,
5891941-5892073,5892629-5892732,5892867-5895780,
5895876-5895965,5896251-5896355,5896633-5896740,
5896826-5896876
Length = 1334
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 458 PTGQPGMSNVWLWTAITLDGTSPSCP 381
PT G+S+V LWT L G PS P
Sbjct: 700 PTNSTGVSSVKLWTNAGLFGLEPSKP 725
>03_06_0074 -
31476094-31476215,31477803-31478238,31478438-31478485,
31478569-31479018,31479567-31479681,31480052-31480905
Length = 674
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 395 SPSCPNSARGLPLPTP*TSLIRPPVPVVAPLNGATA 288
SPS P+S+R PLP + RP +P + P NG A
Sbjct: 33 SPSPPSSSRKPPLPPRRSPQKRPGLPTI-PENGPPA 67
>03_01_0378 +
2943605-2943690,2943774-2943920,2944607-2944675,
2944758-2944923,2945000-2945228,2945335-2945888
Length = 416
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 157 NSSAIKGFKHTKVRPTNVKAPSQVIQEVVESDI--IFTAETHNMPTAVAPFSGATTG 321
+S+A K F TK+R TNV P QV++ V S++ + A PF+ + G
Sbjct: 239 SSAATKQFVLTKLRSTNV--PPQVLEAVERSEMNDVLAAPLRFRSPLSLPFASISKG 293
>09_04_0191 - 15467697-15467975,15468078-15468275,15468308-15468331
Length = 166
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 470 NSLHPTGQPGMSNVWLWTAITLDGTSPSCPNSARGLPLPTP 348
+ LH GQP ++ W I+L G +P + LP P P
Sbjct: 111 HELHVAGQPPQASFGTWGGISL-GETPPVRDWVDPLPPPNP 150
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -3
Query: 362 PLPTP*TSLIRPPVPV-VAPLNGAT 291
P PTP + RPPVPV APL T
Sbjct: 143 PTPTPTPTPTRPPVPVWAAPLPART 167
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.132 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,478,797
Number of Sequences: 37544
Number of extensions: 244781
Number of successful extensions: 579
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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