Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_D02
(475 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr... 144 4e-35
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 52 3e-07
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 52 3e-07
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 52 3e-07
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 52 3e-07
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 52 3e-07
J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV) co... 52 3e-07
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 45 3e-05
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 45 3e-05
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 45 3e-05
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 45 3e-05
U41296-1|AAA93297.1| 579|Caenorhabditis elegans Steroid hormone... 31 0.56
AY204170-1|AAO39174.1| 579|Caenorhabditis elegans nuclear recep... 31 0.56
AF067936-1|AAC19212.2| 579|Caenorhabditis elegans Nuclear hormo... 31 0.56
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 29 1.3
U64848-2|AAM29669.2| 376|Caenorhabditis elegans Hypothetical pr... 29 1.3
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 29 1.3
AF099914-1|AAC68761.1| 285|Caenorhabditis elegans Hypothetical ... 28 3.0
U28732-1|AAB04901.2| 540|Caenorhabditis elegans Hypothetical pr... 27 5.2
U20861-12|AAA62299.1| 403|Caenorhabditis elegans Hypothetical p... 27 5.2
U20861-13|ABD63242.1| 112|Caenorhabditis elegans Hypothetical p... 27 6.9
>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical
protein F10F2.2 protein.
Length = 1343
Score = 144 bits (348), Expect = 4e-35
Identities = 72/157 (45%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Frame = +1
Query: 1 FDLAQSNSEHSRHWFFKGKLILDGKEINESLIEMVASTQKTSNDNNVIKFGDNSSAIKGF 180
FDLAQS+SEHSRHWFF+G++ +D ++ + SL++ + T +SNDN++I F DNSSAI+GF
Sbjct: 211 FDLAQSDSEHSRHWFFRGEIWIDDRKRDGSLMKTIRETLDSSNDNSLIAFCDNSSAIRGF 270
Query: 181 KHT-KVRPTNVKAPSQVIQEVVESDIIFTAETHNMPTAVAPFSGATTGTGGRIRDVQGVG 357
+ ++RP + S +I S +I++AETHN PTAV PF GATTGTGGRIRD+ G
Sbjct: 271 ESVCRLRPNDPTTVSPMIAIFPPSHLIYSAETHNFPTAVCPFQGATTGTGGRIRDIHATG 330
Query: 358 RGRPRAEFGHEGEVPSNVIAVHSQTLDIPGCPVGWSE 468
RG +E + + L++PG P+ W +
Sbjct: 331 RG------AYE---IAGTVGYSFGNLNLPGLPLPWED 358
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +1
Query: 394 EVPSNVIAVHSQTLDIPGCPVGWSELW 474
E P+N IAVHSQT+ IP CP GWS LW
Sbjct: 1637 EAPANTIAVHSQTIQIPNCPAGWSSLW 1663
Score = 32.3 bits (70), Expect = 0.18
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 409 VIAVHSQTLDIPGCPVGWSELW 474
V+ HSQT ++P CP G ++LW
Sbjct: 1534 VLVKHSQTTEVPRCPEGQTKLW 1555
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +1
Query: 394 EVPSNVIAVHSQTLDIPGCPVGWSELW 474
E P+N IAVHSQT+ IP CP GWS LW
Sbjct: 1636 EAPANTIAVHSQTIQIPNCPAGWSSLW 1662
Score = 32.3 bits (70), Expect = 0.18
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 409 VIAVHSQTLDIPGCPVGWSELW 474
V+ HSQT ++P CP G ++LW
Sbjct: 1533 VLVKHSQTTEVPRCPEGQTKLW 1554
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +1
Query: 394 EVPSNVIAVHSQTLDIPGCPVGWSELW 474
E P+N IAVHSQT+ IP CP GWS LW
Sbjct: 1636 EAPANTIAVHSQTIQIPNCPAGWSSLW 1662
Score = 32.3 bits (70), Expect = 0.18
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 409 VIAVHSQTLDIPGCPVGWSELW 474
V+ HSQT ++P CP G ++LW
Sbjct: 1533 VLVKHSQTTEVPRCPEGQTKLW 1554
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +1
Query: 394 EVPSNVIAVHSQTLDIPGCPVGWSELW 474
E P+N IAVHSQT+ IP CP GWS LW
Sbjct: 1637 EAPANTIAVHSQTIQIPNCPAGWSSLW 1663
Score = 32.3 bits (70), Expect = 0.18
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 409 VIAVHSQTLDIPGCPVGWSELW 474
V+ HSQT ++P CP G ++LW
Sbjct: 1534 VLVKHSQTTEVPRCPEGQTKLW 1555
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +1
Query: 394 EVPSNVIAVHSQTLDIPGCPVGWSELW 474
E P+N IAVHSQT+ IP CP GWS LW
Sbjct: 1673 EAPANTIAVHSQTIQIPNCPAGWSSLW 1699
Score = 32.3 bits (70), Expect = 0.18
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 409 VIAVHSQTLDIPGCPVGWSELW 474
V+ HSQT ++P CP G ++LW
Sbjct: 1570 VLVKHSQTTEVPRCPEGQTKLW 1591
>J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV)
collagen protein.
Length = 261
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +1
Query: 394 EVPSNVIAVHSQTLDIPGCPVGWSELW 474
E P+N IAVHSQT+ IP CP GWS LW
Sbjct: 139 EAPANTIAVHSQTIQIPNCPAGWSSLW 165
Score = 32.3 bits (70), Expect = 0.18
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 409 VIAVHSQTLDIPGCPVGWSELW 474
V+ HSQT ++P CP G ++LW
Sbjct: 36 VLVKHSQTTEVPRCPEGQTKLW 57
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 44.8 bits (101), Expect = 3e-05
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 394 EVPSNVIAVHSQTLDIPGCPVGWSELW 474
EVP+ +IAVHSQ +P CP GWS +W
Sbjct: 1385 EVPTQIIAVHSQDTSVPQCPQGWSGMW 1411
Score = 31.5 bits (68), Expect = 0.32
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 391 GEVPSN--VIAVHSQTLDIPGCPVGWSELW 474
G PS A HSQT +P CP G S+LW
Sbjct: 1272 GWAPSRGFTFAKHSQTTAVPQCPPGASQLW 1301
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 44.8 bits (101), Expect = 3e-05
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 394 EVPSNVIAVHSQTLDIPGCPVGWSELW 474
EVP+ +IAVHSQ +P CP GWS +W
Sbjct: 1642 EVPTQIIAVHSQDTSVPQCPQGWSGMW 1668
Score = 31.5 bits (68), Expect = 0.32
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 391 GEVPSN--VIAVHSQTLDIPGCPVGWSELW 474
G PS A HSQT +P CP G S+LW
Sbjct: 1529 GWAPSRGFTFAKHSQTTAVPQCPPGASQLW 1558
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 44.8 bits (101), Expect = 3e-05
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 394 EVPSNVIAVHSQTLDIPGCPVGWSELW 474
EVP+ +IAVHSQ +P CP GWS +W
Sbjct: 1641 EVPTQIIAVHSQDTSVPQCPQGWSGMW 1667
Score = 31.5 bits (68), Expect = 0.32
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 391 GEVPSN--VIAVHSQTLDIPGCPVGWSELW 474
G PS A HSQT +P CP G S+LW
Sbjct: 1528 GWAPSRGFTFAKHSQTTAVPQCPPGASQLW 1557
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 44.8 bits (101), Expect = 3e-05
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 394 EVPSNVIAVHSQTLDIPGCPVGWSELW 474
EVP+ +IAVHSQ +P CP GWS +W
Sbjct: 196 EVPTQIIAVHSQDTSVPQCPQGWSGMW 222
Score = 32.7 bits (71), Expect = 0.14
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 319 GTGGRIRDVQGVGRGRPRAEFGHEGEVPSN--VIAVHSQTLDIPGCPVGWSELW 474
G GR + QG+ G P G PS A HSQT +P CP G S+LW
Sbjct: 61 GAAGRTGN-QGLP-GTPGYPGSPGGWAPSRGFTFAKHSQTTAVPQCPPGASQLW 112
>U41296-1|AAA93297.1| 579|Caenorhabditis elegans Steroid hormone
receptor-like proteinprotein.
Length = 579
Score = 30.7 bits (66), Expect = 0.56
Identities = 26/96 (27%), Positives = 43/96 (44%)
Frame = +1
Query: 10 AQSNSEHSRHWFFKGKLILDGKEINESLIEMVASTQKTSNDNNVIKFGDNSSAIKGFKHT 189
+ S S SR G L+ +G+++++ L ++ + + N I FG+NSS K +
Sbjct: 273 SNSGSGCSRVSSVAGSLVSNGEDVHDDLTNLLHAACIQQSINKGIMFGENSSDDKILLNL 332
Query: 190 KVRPTNVKAPSQVIQEVVESDIIFTAETHNMPTAVA 297
+R K P +V E I E N+P A
Sbjct: 333 PIREIK-KEPLEV--PSTEGMIQLPTEYGNLPADYA 365
>AY204170-1|AAO39174.1| 579|Caenorhabditis elegans nuclear receptor
NHR-47 protein.
Length = 579
Score = 30.7 bits (66), Expect = 0.56
Identities = 26/96 (27%), Positives = 43/96 (44%)
Frame = +1
Query: 10 AQSNSEHSRHWFFKGKLILDGKEINESLIEMVASTQKTSNDNNVIKFGDNSSAIKGFKHT 189
+ S S SR G L+ +G+++++ L ++ + + N I FG+NSS K +
Sbjct: 273 SNSGSGCSRVSSVAGSLVSNGEDVHDDLTNLLHAACIQQSINKGIMFGENSSDDKILLNL 332
Query: 190 KVRPTNVKAPSQVIQEVVESDIIFTAETHNMPTAVA 297
+R K P +V E I E N+P A
Sbjct: 333 PIREIK-KEPLEV--PSTEGMIQLPTEYGNLPADYA 365
>AF067936-1|AAC19212.2| 579|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 47 protein.
Length = 579
Score = 30.7 bits (66), Expect = 0.56
Identities = 26/96 (27%), Positives = 43/96 (44%)
Frame = +1
Query: 10 AQSNSEHSRHWFFKGKLILDGKEINESLIEMVASTQKTSNDNNVIKFGDNSSAIKGFKHT 189
+ S S SR G L+ +G+++++ L ++ + + N I FG+NSS K +
Sbjct: 273 SNSGSGCSRVSSVAGSLVSNGEDVHDDLTNLLHAACIQQSINKGIMFGENSSDDKILLNL 332
Query: 190 KVRPTNVKAPSQVIQEVVESDIIFTAETHNMPTAVA 297
+R K P +V E I E N+P A
Sbjct: 333 PIREIK-KEPLEV--PSTEGMIQLPTEYGNLPADYA 365
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Frame = +1
Query: 109 STQKTSNDNNVIKFG---------DNSSAIKGFKHTKVRPTNVK-APSQVIQEVVESDII 258
S+QK SND IK ++ +++ K + T +K +PS ++ SD+
Sbjct: 1650 SSQKESNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVS 1709
Query: 259 FTAETH-NMPTAVAPFSGATTGTGGRIRDVQGVGRGRPRAEFGHEGEVPS 405
++ETH + P A++P + T +R + G+ + ++GE PS
Sbjct: 1710 -SSETHEDEPQAMSPSTSFDTRDADAMRAL-GIDDDSAAFQIKNDGEEPS 1757
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Frame = +1
Query: 109 STQKTSNDNNVIKFG---------DNSSAIKGFKHTKVRPTNVK-APSQVIQEVVESDII 258
S+QK SND IK ++ +++ K + T +K +PS ++ SD+
Sbjct: 1672 SSQKESNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVS 1731
Query: 259 FTAETH-NMPTAVAPFSGATTGTGGRIRDVQGVGRGRPRAEFGHEGEVPS 405
++ETH + P A++P + T +R + G+ + ++GE PS
Sbjct: 1732 -SSETHEDEPQAMSPSTSFDTRDADAMRAL-GIDDDSAAFQIKNDGEEPS 1779
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Frame = +1
Query: 109 STQKTSNDNNVIKFG---------DNSSAIKGFKHTKVRPTNVK-APSQVIQEVVESDII 258
S+QK SND IK ++ +++ K + T +K +PS ++ SD+
Sbjct: 1463 SSQKESNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVS 1522
Query: 259 FTAETH-NMPTAVAPFSGATTGTGGRIRDVQGVGRGRPRAEFGHEGEVPS 405
++ETH + P A++P + T +R + G+ + ++GE PS
Sbjct: 1523 -SSETHEDEPQAMSPSTSFDTRDADAMRAL-GIDDDSAAFQIKNDGEEPS 1570
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Frame = +1
Query: 109 STQKTSNDNNVIKFG---------DNSSAIKGFKHTKVRPTNVK-APSQVIQEVVESDII 258
S+QK SND IK ++ +++ K + T +K +PS ++ SD+
Sbjct: 1770 SSQKESNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVS 1829
Query: 259 FTAETH-NMPTAVAPFSGATTGTGGRIRDVQGVGRGRPRAEFGHEGEVPS 405
++ETH + P A++P + T +R + G+ + ++GE PS
Sbjct: 1830 -SSETHEDEPQAMSPSTSFDTRDADAMRAL-GIDDDSAAFQIKNDGEEPS 1877
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Frame = +1
Query: 109 STQKTSNDNNVIKFG---------DNSSAIKGFKHTKVRPTNVK-APSQVIQEVVESDII 258
S+QK SND IK ++ +++ K + T +K +PS ++ SD+
Sbjct: 1650 SSQKESNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVS 1709
Query: 259 FTAETH-NMPTAVAPFSGATTGTGGRIRDVQGVGRGRPRAEFGHEGEVPS 405
++ETH + P A++P + T +R + G+ + ++GE PS
Sbjct: 1710 -SSETHEDEPQAMSPSTSFDTRDADAMRAL-GIDDDSAAFQIKNDGEEPS 1757
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Frame = +1
Query: 109 STQKTSNDNNVIKFG---------DNSSAIKGFKHTKVRPTNVK-APSQVIQEVVESDII 258
S+QK SND IK ++ +++ K + T +K +PS ++ SD+
Sbjct: 1672 SSQKESNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVS 1731
Query: 259 FTAETH-NMPTAVAPFSGATTGTGGRIRDVQGVGRGRPRAEFGHEGEVPS 405
++ETH + P A++P + T +R + G+ + ++GE PS
Sbjct: 1732 -SSETHEDEPQAMSPSTSFDTRDADAMRAL-GIDDDSAAFQIKNDGEEPS 1779
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Frame = +1
Query: 109 STQKTSNDNNVIKFG---------DNSSAIKGFKHTKVRPTNVK-APSQVIQEVVESDII 258
S+QK SND IK ++ +++ K + T +K +PS ++ SD+
Sbjct: 1463 SSQKESNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVS 1522
Query: 259 FTAETH-NMPTAVAPFSGATTGTGGRIRDVQGVGRGRPRAEFGHEGEVPS 405
++ETH + P A++P + T +R + G+ + ++GE PS
Sbjct: 1523 -SSETHEDEPQAMSPSTSFDTRDADAMRAL-GIDDDSAAFQIKNDGEEPS 1570
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Frame = +1
Query: 109 STQKTSNDNNVIKFG---------DNSSAIKGFKHTKVRPTNVK-APSQVIQEVVESDII 258
S+QK SND IK ++ +++ K + T +K +PS ++ SD+
Sbjct: 1770 SSQKESNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVS 1829
Query: 259 FTAETH-NMPTAVAPFSGATTGTGGRIRDVQGVGRGRPRAEFGHEGEVPS 405
++ETH + P A++P + T +R + G+ + ++GE PS
Sbjct: 1830 -SSETHEDEPQAMSPSTSFDTRDADAMRAL-GIDDDSAAFQIKNDGEEPS 1877
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Frame = +1
Query: 109 STQKTSNDNNVIKFG---------DNSSAIKGFKHTKVRPTNVK-APSQVIQEVVESDII 258
S+QK SND IK ++ +++ K + T +K +PS ++ SD+
Sbjct: 1481 SSQKESNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVS 1540
Query: 259 FTAETH-NMPTAVAPFSGATTGTGGRIRDVQGVGRGRPRAEFGHEGEVPS 405
++ETH + P A++P + T +R + G+ + ++GE PS
Sbjct: 1541 -SSETHEDEPQAMSPSTSFDTRDADAMRAL-GIDDDSAAFQIKNDGEEPS 1588
>U64848-2|AAM29669.2| 376|Caenorhabditis elegans Hypothetical
protein C50E3.6 protein.
Length = 376
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 220 SQVIQEVVESDIIFTAETHNMPTAV 294
S ++ EVVES++IFT E N+ T +
Sbjct: 16 STILLEVVESNVIFTVEESNVTTPI 40
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Frame = +1
Query: 109 STQKTSNDNNVIKFG---------DNSSAIKGFKHTKVRPTNVK-APSQVIQEVVESDII 258
S+QK SND IK ++ +++ K + T +K +PS ++ SD+
Sbjct: 1441 SSQKESNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVS 1500
Query: 259 FTAETH-NMPTAVAPFSGATTGTGGRIRDVQGVGRGRPRAEFGHEGEVPS 405
++ETH + P A++P + T +R + G+ + ++GE PS
Sbjct: 1501 -SSETHEDEPQAMSPSTSFDTRDADAMRAL-GIDDDSAAFQIKNDGEEPS 1548
>AF099914-1|AAC68761.1| 285|Caenorhabditis elegans Hypothetical
protein C40A11.5 protein.
Length = 285
Score = 28.3 bits (60), Expect = 3.0
Identities = 9/43 (20%), Positives = 25/43 (58%)
Frame = +1
Query: 1 FDLAQSNSEHSRHWFFKGKLILDGKEINESLIEMVASTQKTSN 129
F ++ + RH+F+KG + +G E++ ++ + + +K+ +
Sbjct: 74 FSKSKKETHTIRHYFYKGWIAQNGPELSREILNVFKAVRKSKS 116
>U28732-1|AAB04901.2| 540|Caenorhabditis elegans Hypothetical
protein F45E1.5 protein.
Length = 540
Score = 27.5 bits (58), Expect = 5.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 139 VIKFGDNSSAIKGFKHTKVRPTNVKAPSQVIQEVVESDIIFT 264
++K DN ++ + FK T V PT K P +I + E +I+ T
Sbjct: 183 IVKTSDNPASSEEFKVTPVHPT--KKPFIMIHQTNEQEIMKT 222
>U20861-12|AAA62299.1| 403|Caenorhabditis elegans Hypothetical
protein C28H8.11a protein.
Length = 403
Score = 27.5 bits (58), Expect = 5.2
Identities = 18/82 (21%), Positives = 35/82 (42%)
Frame = +1
Query: 85 ESLIEMVASTQKTSNDNNVIKFGDNSSAIKGFKHTKVRPTNVKAPSQVIQEVVESDIIFT 264
+S+++ Q N N ++ A+ + + + P Q++ +++ D +FT
Sbjct: 264 QSILDPRQHEQHIRNGNRLLSHDATKGAMMIYFYRDM--PRFSQPYQILTFLMDIDSLFT 321
Query: 265 AETHNMPTAVAPFSGATTGTGG 330
+N V GA GTGG
Sbjct: 322 KWRYNHVLLVQRMLGAKQGTGG 343
>U20861-13|ABD63242.1| 112|Caenorhabditis elegans Hypothetical
protein C28H8.11c protein.
Length = 112
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 217 PSQVIQEVVESDIIFTAETHNMPTAVAPFSGATTGTGG 330
P Q++ +++ D +FT +N V GA GTGG
Sbjct: 15 PYQILTFLMDIDSLFTKWRYNHVLLVQRMLGAKQGTGG 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.132 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,365,979
Number of Sequences: 27780
Number of extensions: 203556
Number of successful extensions: 447
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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