Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_C23
(126 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical pr... 42 5e-05
Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical pr... 42 5e-05
Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical pr... 42 5e-05
Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical pr... 42 5e-05
Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical pr... 42 5e-05
Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical pr... 42 5e-05
Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical pr... 42 5e-05
Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical pr... 42 5e-05
Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical p... 42 5e-05
Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical pr... 42 5e-05
X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein... 42 5e-05
U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein... 42 5e-05
U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein... 42 5e-05
U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein... 42 5e-05
U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protei... 42 5e-05
U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein... 42 5e-05
AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3 pr... 42 5e-05
AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone prote... 42 5e-05
AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone prote... 42 5e-05
Z38112-2|CAA86229.1| 126|Caenorhabditis elegans Hypothetical pr... 38 0.001
Z99272-1|CAI79171.1| 615|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z81113-9|CAI79237.1| 615|Caenorhabditis elegans Hypothetical pr... 25 7.4
>Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical
protein Y49E10.6 protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical
protein T10C6.13 protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.7 protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.3 protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.2 protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical
protein F54E12.1 protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical
protein F08G2.3 protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical
protein W05B10.1 protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical
protein B0035.10 protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical
protein F22B3.2 protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein
protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein 6
protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein 17
protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein 27
protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protein
59 protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein 71
protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3
protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone protein
32 protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone protein
49 protein.
Length = 136
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTKQTARKSTGGKAPRK
Sbjct: 1 MARTKQTARKSTGGKAPRK 19
>Z38112-2|CAA86229.1| 126|Caenorhabditis elegans Hypothetical
protein E03A3.4 protein.
Length = 126
Score = 37.5 bits (83), Expect = 0.001
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 69 MARTKQTARKSTGGKAPRK 125
MARTK TARKS GGKAPRK
Sbjct: 1 MARTKHTARKSFGGKAPRK 19
>Z99272-1|CAI79171.1| 615|Caenorhabditis elegans Hypothetical
protein T03F6.8 protein.
Length = 615
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 94 RAVCFVRAIIHFSELLKSINYIKLY*NWIY 5
R + FVR I ++ L ++ Y+K+ WIY
Sbjct: 202 REINFVRWKIAYNRLKRNKRYVKVGSRWIY 231
>Z81113-9|CAI79237.1| 615|Caenorhabditis elegans Hypothetical
protein T03F6.8 protein.
Length = 615
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 94 RAVCFVRAIIHFSELLKSINYIKLY*NWIY 5
R + FVR I ++ L ++ Y+K+ WIY
Sbjct: 202 REINFVRWKIAYNRLKRNKRYVKVGSRWIY 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,418,746
Number of Sequences: 27780
Number of extensions: 25135
Number of successful extensions: 63
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 12,740,198
effective HSP length: 22
effective length of database: 12,129,038
effective search space used: 230451722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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