Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_C19
(459 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 221 6e-57
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 148 7e-35
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 120 2e-26
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 118 5e-26
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 108 5e-23
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 80 3e-14
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 75 6e-13
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 74 1e-12
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 73 2e-12
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 71 9e-12
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 69 6e-11
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 68 9e-11
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 67 1e-10
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 63 2e-09
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 60 2e-08
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 60 3e-08
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 60 3e-08
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 57 2e-07
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 55 6e-07
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 53 3e-06
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 52 5e-06
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 50 3e-05
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 48 1e-04
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 40 0.020
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 40 0.034
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 38 0.10
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 36 0.32
UniRef50_Q9RH14 Cluster: Putative uncharacterized protein; n=2; ... 35 0.97
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 35 0.97
UniRef50_Q8T248 Cluster: Similar to Dictyostelium discoideum (Sl... 33 3.0
UniRef50_Q2HHY9 Cluster: Predicted protein; n=1; Chaetomium glob... 32 6.8
UniRef50_A5A7S2 Cluster: PDZ domain protein; n=1; Desulfovibrio ... 31 9.0
UniRef50_A1D3M4 Cluster: MYB DNA-binding domain protein; n=3; Tr... 31 9.0
UniRef50_Q9LVG8 Cluster: Putative F-box protein At5g60060; n=1; ... 31 9.0
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 221 bits (540), Expect = 6e-57
Identities = 107/151 (70%), Positives = 114/151 (75%)
Frame = +1
Query: 7 KPRNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTV 186
KPRNYDLGNGV+RFSKS+M+HKKA YKF+G TVVVKQIGGEKNGGTRTV
Sbjct: 28 KPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRTV 87
Query: 187 LLKSRKSFYPTQDKIRGRSHGTSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXX 366
LK RKSFYPTQ+KIR S G FSKHVRR RPNL GTVCILLAGRHAGKR
Sbjct: 88 PLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 147
Query: 367 XXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
TGPFAFN+CPLRRIPQRYVIGTST+
Sbjct: 148 SGLLLVTGPFAFNSCPLRRIPQRYVIGTSTR 178
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 148 bits (358), Expect = 7e-35
Identities = 74/150 (49%), Positives = 92/150 (61%)
Frame = +1
Query: 10 PRNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVL 189
P N L G+LR+SK++MY ++A+Y+ VK+IGG KNGG RTV
Sbjct: 21 PVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVF 80
Query: 190 LKSRKSFYPTQDKIRGRSHGTSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXX 369
LK K+ YPT+ ++ R +FS+H R TR NLTPGTV ILLAGRH GKR
Sbjct: 81 LKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLAS 140
Query: 370 XXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
TGPFA N+CPLRR+ QRYVIGTS+K
Sbjct: 141 GLLLVTGPFALNSCPLRRVSQRYVIGTSSK 170
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 120 bits (288), Expect = 2e-26
Identities = 65/154 (42%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Frame = +1
Query: 4 GKPRNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRT 183
G P+N+ L GV FS+S+M+HK+ ++K V VK++ GEKNGG R
Sbjct: 23 GVPKNHKLPGGVWLFSRSKMFHKRGLFKVKHAAPTKEKRKRKKRVTVKRVKGEKNGGKRV 82
Query: 184 VLLKSRKSFYPTQDKIRGR--SHGTSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXX 357
+ LK + YPT+D + + SH S+ R +TPGTV ILLAG H GKR
Sbjct: 83 LPLKKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVLILLAGPHRGKRVVFLK 142
Query: 358 XXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
TGP+ N CPLRRI Q YVI TSTK
Sbjct: 143 QLKTGLLPVTGPYGVNGCPLRRINQIYVIATSTK 176
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 118 bits (285), Expect = 5e-26
Identities = 69/161 (42%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Frame = +1
Query: 4 GKP---RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGE 162
GKP RN L G+ R+S+S MY +KA+YK V K +GG+
Sbjct: 40 GKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGD 99
Query: 163 KNGGTRTVLLKSRKSFYPTQDKIRGR-SHGTS-FSKHVRRTRPNLTPGTVCILLAGRHAG 336
KNGGTR V L+ +YPT+D R SHG FS+HVR+ R ++TPGT+ I+L GRH G
Sbjct: 100 KNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRG 159
Query: 337 KRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
KR TGP N PLRR Q++VI TSTK
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTK 200
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 108 bits (260), Expect = 5e-23
Identities = 62/148 (41%), Positives = 79/148 (53%)
Frame = +1
Query: 13 RNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLL 192
RN +L G+ R+S+S +Y K+A+YK T K IGG+KNGG R V +
Sbjct: 11 RNPELAPGISRYSRSAIYKKRALYKRKKTGVKKVVQDEPRTKT-KDIGGDKNGGKRVVPV 69
Query: 193 KSRKSFYPTQDKIRGRSHGTSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXX 372
+ +YPT+D +R R + + R ++TPGTV ILLAG H GKR
Sbjct: 70 QRESRYYPTED-VRRRLANRK-KPGMAKLRSSITPGTVLILLAGAHRGKRVVFLKQLNSG 127
Query: 373 XXXFTGPFAFNACPLRRIPQRYVIGTST 456
TGPF N PLRRIPQ YVI TST
Sbjct: 128 LLLVTGPFKINGVPLRRIPQSYVIATST 155
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 79.8 bits (188), Expect = 3e-14
Identities = 42/108 (38%), Positives = 58/108 (53%)
Frame = +1
Query: 136 VVVKQIGGEKNGGTRTVLLKSRKSFYPTQDKIRGRSHGTSFSKHVRRTRPNLTPGTVCIL 315
V+ K+IGG+KNGGTR V + FYP + + +K+ + R +L PGT+ IL
Sbjct: 44 VIEKKIGGDKNGGTRLVSTRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILIL 103
Query: 316 LAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
LAG + GKR +GP N PLRR+ Q+ VI TST+
Sbjct: 104 LAGVNRGKRVVLLKALKSGLLLVSGPLKVNRVPLRRVHQKLVIATSTR 151
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 75.4 bits (177), Expect = 6e-13
Identities = 46/107 (42%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Frame = +1
Query: 157 GEKNGGTRTVLLKSRKSF---YPTQD---KIRGRSHGTSFSKHVRRTRPNLTPGTVCILL 318
G + T+ L+K + F Y TQ K+R R FS HVR+ R ++ PGTV ILL
Sbjct: 42 GLRTPKTKEALVKPKTRFPRSYVTQQGKRKLRLR-RAKCFSNHVRKIRSSIQPGTVLILL 100
Query: 319 AGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
AG H GKR TGPF +N PLRR+ Q YVI TST+
Sbjct: 101 AGPHKGKRVIFLKALKSGLLLVTGPFKYNGVPLRRVNQCYVIATSTR 147
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 74.1 bits (174), Expect = 1e-12
Identities = 43/107 (40%), Positives = 53/107 (49%)
Frame = +1
Query: 136 VVVKQIGGEKNGGTRTVLLKSRKSFYPTQDKIRGRSHGTSFSKHVRRTRPNLTPGTVCIL 315
++ K IGG KNGG R V K +YP DK + K + RP++ GT+ IL
Sbjct: 22 MIKKPIGGAKNGGYRLVPEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIVIL 80
Query: 316 LAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 456
LAG G R TGP+A N PL R+ QRYVI TST
Sbjct: 81 LAGVFRGSRVVVLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIATST 127
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 73.3 bits (172), Expect = 2e-12
Identities = 50/149 (33%), Positives = 69/149 (46%)
Frame = +1
Query: 13 RNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLL 192
RN DL GV ++S+S+MYHK+ ++ + V +
Sbjct: 12 RNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPV------------- 58
Query: 193 KSRKSFYPTQDKIRGRSHGTSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXX 372
+ FYP +D ++ +K + R ++TPGTV I+LAGR GKR
Sbjct: 59 EKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQLASG 116
Query: 373 XXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
TGPF N PLRR+ Q YVIGTSTK
Sbjct: 117 LLLVTGPFKINGVPLRRVNQAYVIGTSTK 145
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 71.3 bits (167), Expect = 9e-12
Identities = 34/68 (50%), Positives = 40/68 (58%)
Frame = +1
Query: 256 FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQR 435
F+ H RR R ++TPG V ILLAGRH KR TGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 436 YVIGTSTK 459
YVI T T+
Sbjct: 146 YVIATKTR 153
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 68.5 bits (160), Expect = 6e-11
Identities = 43/98 (43%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +1
Query: 172 GTRTVLLKSRKSFYPTQDKIRGRSHGTSFSKHVRRT--RPNLTPGTVCILLAGRHAGKRX 345
G R + K+ K F P+ I T+ K ++ R ++TPGTV I+LAGR AGKR
Sbjct: 54 GKRVIAAKASK-FAPS---IPAEIRSTAAKKVQQKVALRKSITPGTVLIILAGRFAGKRV 109
Query: 346 XXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
TGPF N PLRRI QRYVI TSTK
Sbjct: 110 VALKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTK 147
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 68.1 bits (159), Expect = 9e-11
Identities = 38/88 (43%), Positives = 46/88 (52%)
Frame = +1
Query: 196 SRKSFYPTQDKIRGRSHGTSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXX 375
S FYP D ++ R T + + R ++TPGTV ILLAGR GKR
Sbjct: 49 SAPKFYPADD-VKPRQPSTR-KPNPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGL 106
Query: 376 XXFTGPFAFNACPLRRIPQRYVIGTSTK 459
TGPF N P+RR+ Q YVI TSTK
Sbjct: 107 LLVTGPFKINGVPIRRVNQPYVIATSTK 134
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 67.3 bits (157), Expect = 1e-10
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Frame = +1
Query: 133 TVVVKQIGGEKN--GGTRTVLLKSRKS--FYPTQDKIRGRSHGTSFSKHVRRTRPNLTPG 300
T+ K +G K G R + S+K+ +YP D+ + + + H + RP+L PG
Sbjct: 4 TLDSKSVGQTKKFGKGERVIPHPSQKAQKWYPADDEPQPKK--ARKTAHPTKLRPSLQPG 61
Query: 301 TVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 456
T+ ILLAGR GKR TGPF N PLRR+ RYVI TS+
Sbjct: 62 TILILLAGRFRGKRVILLKHLGQGVLLVTGPFKLNGVPLRRVNARYVIATSS 113
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 63.3 bits (147), Expect = 2e-09
Identities = 35/84 (41%), Positives = 45/84 (53%)
Frame = +1
Query: 208 FYPTQDKIRGRSHGTSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFT 387
+YP++D + T + ++ R +L PGTV ILLAGR GKR +
Sbjct: 9 WYPSEDVAALKK--TRKAARPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLIS 66
Query: 388 GPFAFNACPLRRIPQRYVIGTSTK 459
GPF N PLRR+ RYVI TSTK
Sbjct: 67 GPFKVNGVPLRRVNARYVIATSTK 90
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 60.5 bits (140), Expect = 2e-08
Identities = 30/63 (47%), Positives = 35/63 (55%)
Frame = +1
Query: 268 VRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIG 447
V + R +L PG V ILL G + GKR TGPF+FN PLRR+ RYVI
Sbjct: 37 VPKVRESLKPGAVLILLTGSYKGKRVVLLKVLKSGLLLVTGPFSFNGVPLRRVNSRYVIA 96
Query: 448 TST 456
TST
Sbjct: 97 TST 99
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 59.7 bits (138), Expect = 3e-08
Identities = 28/62 (45%), Positives = 35/62 (56%)
Frame = +1
Query: 274 RTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTS 453
+ R +L PG VCILLAG + GKR TGP+A N P+RR+ Y+I TS
Sbjct: 34 KLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGVPVRRVNPAYIIATS 93
Query: 454 TK 459
TK
Sbjct: 94 TK 95
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 59.7 bits (138), Expect = 3e-08
Identities = 31/60 (51%), Positives = 32/60 (53%)
Frame = +1
Query: 280 RPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
R L PGTV ILLAGR GKR TGPF N PLRR+ RYVI TS K
Sbjct: 36 RSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRRVNARYVIATSQK 95
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 56.8 bits (131), Expect = 2e-07
Identities = 35/76 (46%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +1
Query: 244 HGTSFSKHVRRT---RPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXF-TGPFAFNAC 411
+GT F+ +T R LTPGTV I+LAGRH GKR TGP N
Sbjct: 53 NGTKFALGHSKTVTLRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGF 112
Query: 412 PLRRIPQRYVIGTSTK 459
PLRRI Q +VI TS K
Sbjct: 113 PLRRIGQAFVIATSLK 128
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 55.2 bits (127), Expect = 6e-07
Identities = 47/148 (31%), Positives = 61/148 (41%)
Frame = +1
Query: 13 RNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLL 192
RN L G R+S +Y +K Y V V+K + G+KNGGT V L
Sbjct: 49 RNPILVRGTGRYSIKALYERK--YSAVKSKCEKKKKEKVVATVIKTVSGDKNGGTGVVKL 106
Query: 193 KSRKSFYPTQDKIRGRSHGTSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXX 372
+ K Y K +S K V N TP TV I++ G+H +R
Sbjct: 107 QKMK-MYLGSCKAMAKSPAFKHEKAV----CNSTPETVLIIITGQH--RRVVFLKQLSRG 159
Query: 373 XXXFTGPFAFNACPLRRIPQRYVIGTST 456
TGP A N L R Q+ V+ TST
Sbjct: 160 FLLITGPLALNLVLLYRTHQKSVVITST 187
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 52.8 bits (121), Expect = 3e-06
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Frame = +1
Query: 139 VVKQIGGEKNGGTRTVLLKSRKSFYPTQDK--IRGRSHG---TSFSKHV--RRTRPNLTP 297
VV G +KN V+ +K P + K I + +G S K V R+ R ++
Sbjct: 17 VVPATGDKKNALKHYVIKGQKKILTPVRAKKTISKKHYGRKLASKKKFVVQRKMRSSIQV 76
Query: 298 GTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 456
G V I+L G+H GKR GP+ N PL+R+ RY+I TST
Sbjct: 77 GKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVTST 129
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 52.4 bits (120), Expect = 5e-06
Identities = 27/61 (44%), Positives = 31/61 (50%)
Frame = +1
Query: 277 TRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 456
T + PG V ILL+GR GKR TGPF N PL+R+ YVI TST
Sbjct: 54 TLRKIVPGQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKINGVPLKRVNSAYVIPTST 113
Query: 457 K 459
K
Sbjct: 114 K 114
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 49.6 bits (113), Expect = 3e-05
Identities = 26/58 (44%), Positives = 30/58 (51%)
Frame = +1
Query: 286 NLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
++TP TV I+L GRH GKR TGP A N PL R+ Q VI T TK
Sbjct: 8 SITPQTVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTK 65
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 47.6 bits (108), Expect = 1e-04
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 280 RPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXF-TGPFAFNACPLRRIPQRYVIGTST 456
R + PG + I+LAGR G+R +GP +N P+RRI RYVI TST
Sbjct: 30 RKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATST 89
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 40.3 bits (90), Expect = 0.020
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = +1
Query: 277 TRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 456
TRP+L GTV I++ G H GKR GP P+ I Q Y+I TST
Sbjct: 52 TRPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGP----VVPVNEISQDYLIATST 107
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 39.5 bits (88), Expect = 0.034
Identities = 24/69 (34%), Positives = 33/69 (47%)
Frame = +1
Query: 250 TSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIP 429
T+ VRRT +L G V ++L G A +R GP + N PL RI
Sbjct: 16 TARKPRVRRT--DLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSINGIPLFRID 73
Query: 430 QRYVIGTST 456
+RY++ TST
Sbjct: 74 ERYLLATST 82
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 37.9 bits (84), Expect = 0.10
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 382 FTGPFAFNACPLRRIPQRYVIGTSTK 459
F GPF+ N P+RRI Q++V+ TSTK
Sbjct: 13 FLGPFSINGVPVRRIAQKFVLPTSTK 38
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 36.3 bits (80), Expect = 0.32
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +1
Query: 385 TGPFAFNACPLRRIPQRYVIGTSTK 459
TG F N PLRR+ Q YVI TSTK
Sbjct: 172 TGSFKINGVPLRRVNQAYVIATSTK 196
>UniRef50_Q9RH14 Cluster: Putative uncharacterized protein; n=2;
Zymomonas mobilis|Rep: Putative uncharacterized protein
- Zymomonas mobilis
Length = 390
Score = 34.7 bits (76), Expect = 0.97
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 231 DLVLSGVE*FPAFQQDCTSASILFTAYLLNHDGWFLG 121
+ LS + F A QD TSA I + YLL H WF G
Sbjct: 339 EYALSDIVYFGALLQDKTSADIAYYDYLLGHSRWFSG 375
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 34.7 bits (76), Expect = 0.97
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 277 TRPNLTPGTVCILLAGRHAGKR 342
++P + PG VCI+L GRHAGK+
Sbjct: 2 SQPIIKPGLVCIVLQGRHAGKK 23
>UniRef50_Q8T248 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Homeobox-containing protein; n=2; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Homeobox-containing protein - Dictyostelium
discoideum (Slime mold)
Length = 1723
Score = 33.1 bits (72), Expect = 3.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 8 NRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKSPRNQPS 139
N G TSE + ++ + G T +++ + +R R SPR QP+
Sbjct: 1569 NNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPT 1612
>UniRef50_Q2HHY9 Cluster: Predicted protein; n=1; Chaetomium
globosum|Rep: Predicted protein - Chaetomium globosum
(Soil fungus)
Length = 838
Score = 31.9 bits (69), Expect = 6.8
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 86 SLSVRRTRKLKSPRNQPSWLSK*AVK-RMEALVQSC*KAGNHSTPLRTR 229
+L VR R+ +SP PSW +V R E +V + AG+ PLRTR
Sbjct: 169 ALGVRTPRRRESPGGLPSWWLVGSVPFRQEIVVTARSVAGDGHAPLRTR 217
>UniRef50_A5A7S2 Cluster: PDZ domain protein; n=1; Desulfovibrio
vulgaris|Rep: PDZ domain protein - Desulfovibrio
vulgaris
Length = 553
Score = 31.5 bits (68), Expect = 9.0
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -2
Query: 422 LRRGHALKAKGPVKSSRPLGNTPTSTTRLPACLPANRMHTVPGV 291
+R G A AKG + + P G TP + PA PA + P V
Sbjct: 246 MRAGRAEGAKGVPRDAAPQGGTPAAPQGAPATNPAQAVPAAPPV 289
>UniRef50_A1D3M4 Cluster: MYB DNA-binding domain protein; n=3;
Trichocomaceae|Rep: MYB DNA-binding domain protein -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 189
Score = 31.5 bits (68), Expect = 9.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 389 PVKSSRPLGNTPTSTTRLPACLPANRM 309
PV +S PL + P T ++PA +PA R+
Sbjct: 53 PVAASTPLSSAPPLTAKIPASVPAKRL 79
>UniRef50_Q9LVG8 Cluster: Putative F-box protein At5g60060; n=1;
Arabidopsis thaliana|Rep: Putative F-box protein
At5g60060 - Arabidopsis thaliana (Mouse-ear cress)
Length = 374
Score = 31.5 bits (68), Expect = 9.0
Identities = 25/95 (26%), Positives = 41/95 (43%)
Frame = +2
Query: 23 TSETVYSVSPKAGCTTRRLYISLSVRRTRKLKSPRNQPSWLSK*AVKRMEALVQSC*KAG 202
+S+T++ + ++ C T RL + LS + R K P+ P W S + L QS
Sbjct: 30 SSDTIHLLCLRSVCATWRLSLPLSNKNNRLSKFPKYLPFWSSSSSSSGFFTLKQS--NVY 87
Query: 203 NHSTPLRTRSGVVLMARVSVNMCVGRDLTSLPAQC 307
PL R+ +V + + + DL S C
Sbjct: 88 KLEAPLNPRTCLVKLQETTPGIMRVLDLFSNDRIC 122
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,301,956
Number of Sequences: 1657284
Number of extensions: 9738761
Number of successful extensions: 27050
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 26151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27034
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -