Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_C19
(459 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 120 2e-27
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 120 3e-27
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 120 3e-27
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 120 3e-27
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 120 3e-27
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 120 3e-27
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 120 3e-27
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 120 3e-27
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 120 3e-27
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 120 3e-27
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 110 3e-24
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 97 3e-20
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 85 1e-16
AB051846-1|BAB61868.1| 758|Homo sapiens Raichu404X protein. 30 3.3
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 120 bits (289), Expect = 2e-27
Identities = 70/161 (43%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Frame = +1
Query: 4 GKP---RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGE 162
GKP RN L GV R+S+S MY +KA+YK V K +GG+
Sbjct: 40 GKPHCSRNPVLVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGD 99
Query: 163 KNGGTRTVLLKSRKSFYPTQDKIRGR-SHGTS-FSKHVRRTRPNLTPGTVCILLAGRHAG 336
KNGGTR V L+ +YPT+D R SHG FS+HVR+ R ++TPGT+ I+L GRH G
Sbjct: 100 KNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRG 159
Query: 337 KRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
KR TGP N PLRR Q++VI TSTK
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTK 200
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 120 bits (288), Expect = 3e-27
Identities = 69/161 (42%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Frame = +1
Query: 4 GKP---RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGE 162
GKP RN L G+ R+S+S MY +KA+YK V K +GG+
Sbjct: 40 GKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGD 99
Query: 163 KNGGTRTVLLKSRKSFYPTQDKIRGR-SHGTS-FSKHVRRTRPNLTPGTVCILLAGRHAG 336
KNGGTR V L+ +YPT+D R SHG FS+HVR+ R ++TPGT+ I+L GRH G
Sbjct: 100 KNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRG 159
Query: 337 KRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
KR TGP N PLRR Q++VI TSTK
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTK 200
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 120 bits (288), Expect = 3e-27
Identities = 69/161 (42%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Frame = +1
Query: 4 GKP---RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGE 162
GKP RN L G+ R+S+S MY +KA+YK V K +GG+
Sbjct: 40 GKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGD 99
Query: 163 KNGGTRTVLLKSRKSFYPTQDKIRGR-SHGTS-FSKHVRRTRPNLTPGTVCILLAGRHAG 336
KNGGTR V L+ +YPT+D R SHG FS+HVR+ R ++TPGT+ I+L GRH G
Sbjct: 100 KNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRG 159
Query: 337 KRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
KR TGP N PLRR Q++VI TSTK
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTK 200
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 120 bits (288), Expect = 3e-27
Identities = 69/161 (42%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Frame = +1
Query: 4 GKP---RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGE 162
GKP RN L G+ R+S+S MY +KA+YK V K +GG+
Sbjct: 40 GKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGD 99
Query: 163 KNGGTRTVLLKSRKSFYPTQDKIRGR-SHGTS-FSKHVRRTRPNLTPGTVCILLAGRHAG 336
KNGGTR V L+ +YPT+D R SHG FS+HVR+ R ++TPGT+ I+L GRH G
Sbjct: 100 KNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRG 159
Query: 337 KRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
KR TGP N PLRR Q++VI TSTK
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTK 200
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 120 bits (288), Expect = 3e-27
Identities = 69/161 (42%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Frame = +1
Query: 4 GKP---RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGE 162
GKP RN L G+ R+S+S MY +KA+YK V K +GG+
Sbjct: 40 GKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGD 99
Query: 163 KNGGTRTVLLKSRKSFYPTQDKIRGR-SHGTS-FSKHVRRTRPNLTPGTVCILLAGRHAG 336
KNGGTR V L+ +YPT+D R SHG FS+HVR+ R ++TPGT+ I+L GRH G
Sbjct: 100 KNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRG 159
Query: 337 KRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
KR TGP N PLRR Q++VI TSTK
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTK 200
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 120 bits (288), Expect = 3e-27
Identities = 69/161 (42%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Frame = +1
Query: 4 GKP---RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGE 162
GKP RN L G+ R+S+S MY +KA+YK V K +GG+
Sbjct: 40 GKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGD 99
Query: 163 KNGGTRTVLLKSRKSFYPTQDKIRGR-SHGTS-FSKHVRRTRPNLTPGTVCILLAGRHAG 336
KNGGTR V L+ +YPT+D R SHG FS+HVR+ R ++TPGT+ I+L GRH G
Sbjct: 100 KNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRG 159
Query: 337 KRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
KR TGP N PLRR Q++VI TSTK
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTK 200
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 120 bits (288), Expect = 3e-27
Identities = 69/161 (42%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Frame = +1
Query: 4 GKP---RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGE 162
GKP RN L G+ R+S+S MY +KA+YK V K +GG+
Sbjct: 40 GKPHCGRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGD 99
Query: 163 KNGGTRTVLLKSRKSFYPTQDKIRGR-SHGTS-FSKHVRRTRPNLTPGTVCILLAGRHAG 336
KNGGTR V L+ +YPT+D R SHG FS+HVR+ R ++TPGT+ I+L GRH G
Sbjct: 100 KNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRG 159
Query: 337 KRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
KR TGP N PLRR Q++VI TSTK
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTK 200
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 120 bits (288), Expect = 3e-27
Identities = 69/161 (42%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Frame = +1
Query: 4 GKP---RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGE 162
GKP RN L G+ R+S+S MY +KA+YK V K +GG+
Sbjct: 40 GKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGD 99
Query: 163 KNGGTRTVLLKSRKSFYPTQDKIRGR-SHGTS-FSKHVRRTRPNLTPGTVCILLAGRHAG 336
KNGGTR V L+ +YPT+D R SHG FS+HVR+ R ++TPGT+ I+L GRH G
Sbjct: 100 KNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRG 159
Query: 337 KRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
KR TGP N PLRR Q++VI TSTK
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTK 200
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 120 bits (288), Expect = 3e-27
Identities = 69/161 (42%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Frame = +1
Query: 4 GKP---RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGE 162
GKP RN L G+ R+S+S MY +KA+YK V K +GG+
Sbjct: 40 GKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGD 99
Query: 163 KNGGTRTVLLKSRKSFYPTQDKIRGR-SHGTS-FSKHVRRTRPNLTPGTVCILLAGRHAG 336
KNGGTR V L+ +YPT+D R SHG FS+HVR+ R ++TPGT+ I+L GRH G
Sbjct: 100 KNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRG 159
Query: 337 KRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
KR TGP N PLRR Q++VI TSTK
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTK 200
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 120 bits (288), Expect = 3e-27
Identities = 69/161 (42%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Frame = +1
Query: 4 GKP---RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGE 162
GKP RN L G+ R+S+S MY +KA+YK V K +GG+
Sbjct: 40 GKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGD 99
Query: 163 KNGGTRTVLLKSRKSFYPTQDKIRGR-SHGTS-FSKHVRRTRPNLTPGTVCILLAGRHAG 336
KNGGTR V L+ +YPT+D R SHG FS+HVR+ R ++TPGT+ I+L GRH G
Sbjct: 100 KNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRG 159
Query: 337 KRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
KR TGP N PLRR Q++VI TSTK
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTK 200
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 110 bits (264), Expect = 3e-24
Identities = 67/162 (41%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Frame = +1
Query: 4 GKP---RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGE 162
GKP RN L G+ R+S+S MY +KA+YK V K +GG+
Sbjct: 40 GKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGD 99
Query: 163 KNGGTRTVLLKSRKSFYPTQDKIRG-RSHGTS-FSKHVRRTRPNLTPGTVCILLAGRHAG 336
KNGGTR V L+ +YPT+D R SHG FS+HVR+ R ++TPGT+ I+L GR G
Sbjct: 100 KNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRRRG 159
Query: 337 KR-XXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 459
K TGP N PLRR Q++VI TSTK
Sbjct: 160 KNWVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTK 201
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.1 bits (231), Expect = 3e-20
Identities = 55/143 (38%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Frame = +1
Query: 37 VLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLKSRKSFYP 216
+ S+ MY +K Y V K +GG+KNGGTR V L+ +YP
Sbjct: 60 ICHVSRKAMYKRK--YSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYP 117
Query: 217 TQDKIRGR-SHGTS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTG 390
T+D R SHG FS+HVR+ R ++TPGT+ I+L GRH GKR T
Sbjct: 118 TEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTD 177
Query: 391 PFAFNACPLRRIPQRYVIGTSTK 459
++ PLRR Q++VI TSTK
Sbjct: 178 LWSSIEVPLRRTHQKFVIATSTK 200
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 84.6 bits (200), Expect = 1e-16
Identities = 46/118 (38%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Frame = +1
Query: 46 FSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLKSRKSFYPTQD 225
+S+ MY +K Y V K +GG+KNGGTR V L+ +YPT+D
Sbjct: 2 YSRKAMYKRK--YSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED 59
Query: 226 KIRGR-SHGTS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGP 393
R SHG FS+HVR+ R ++TPGT+ I+L GRH GKR TGP
Sbjct: 60 VPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGP 117
>AB051846-1|BAB61868.1| 758|Homo sapiens Raichu404X protein.
Length = 758
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 365 GNTPTSTTRLPACLPANRMHTVPGVRLGLVLRTCLLK 255
G TP+ T+ N+ TV VR G+ L CL+K
Sbjct: 411 GGTPSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMK 447
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,263,475
Number of Sequences: 237096
Number of extensions: 1591412
Number of successful extensions: 4114
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4084
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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