Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_C16
         (565 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   7.3  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   9.6  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = +3

Query: 132 WIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGTIF 248
           W    IDN     D+  Y  D  CS  +D       T+F
Sbjct: 197 WYSQTIDNSYQFCDNLQYSFDNQCSGTIDWALPNKRTVF 235


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
          protein protein.
          Length = 86

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 68 VDHRWFPLSIHLIIPIFR 15
          VD + F LS  ++IP+FR
Sbjct: 3  VDMQLFVLSPIILIPLFR 20


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,231
Number of Sequences: 336
Number of extensions: 1799
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)