Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_C16
(565 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M84739-1|AAA51916.1| 417|Homo sapiens calreticulin protein. 128 1e-29
M32294-1|AAA36582.1| 417|Homo sapiens protein ( Human Ro ribonu... 128 1e-29
CR457070-1|CAG33351.1| 417|Homo sapiens CALR protein. 128 1e-29
BT007448-1|AAP36116.1| 417|Homo sapiens calreticulin protein. 128 1e-29
BC020493-1|AAH20493.1| 417|Homo sapiens calreticulin protein. 128 1e-29
BC007911-1|AAH07911.1| 417|Homo sapiens calreticulin protein. 128 1e-29
BC002500-1|AAH02500.1| 417|Homo sapiens calreticulin protein. 128 1e-29
AY047586-1|AAL13126.1| 417|Homo sapiens calreticulin protein. 128 1e-29
AK223060-1|BAD96780.1| 406|Homo sapiens calreticulin precursor ... 128 1e-29
AD000092-6|AAB51176.1| 417|Homo sapiens calreticulin protein. 128 1e-29
M94859-1|AAA21749.1| 592|Homo sapiens calnexin protein. 74 3e-13
L18887-1|AAA21013.1| 592|Homo sapiens calnexin protein. 74 3e-13
L10284-1|AAA36125.1| 592|Homo sapiens calnexin protein. 74 3e-13
BC042843-1|AAH42843.1| 592|Homo sapiens calnexin protein. 74 3e-13
BC003552-1|AAH03552.1| 592|Homo sapiens calnexin protein. 74 3e-13
AJ271880-1|CAB72137.1| 592|Homo sapiens calnexin protein. 74 3e-13
D86322-1|BAA22590.1| 610|Homo sapiens calmegin protein. 74 4e-13
BC028357-1|AAH28357.1| 610|Homo sapiens calmegin protein. 74 4e-13
M98452-1|AAA35696.1| 356|Homo sapiens calnexin protein. 71 3e-12
BC014595-1|AAH14595.1| 384|Homo sapiens calreticulin 3 protein. 63 7e-10
AK058084-1|BAB71655.1| 384|Homo sapiens protein ( Homo sapiens ... 63 7e-10
AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens ... 33 0.52
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 33 0.69
AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens ... 31 3.7
AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens ... 31 3.7
AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK123032-1|BAC85519.1| 274|Homo sapiens factor. protein. 29 8.5
AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens ... 29 8.5
>M84739-1|AAA51916.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 128 bits (309), Expect = 1e-29
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
I NP+YKG W P+QIDNP YKG WIHPEIDNPEY+PD ++Y D +GLDLWQVKSGT
Sbjct: 266 IQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGT 325
Query: 243 IFNNFLFTDDPALAKEKG-EIIKKMQEGEKKMK 338
IF+NFL T+D A A+E G E + EK+MK
Sbjct: 326 IFDNFLITNDEAYAEEFGNETWGVTKAAEKQMK 358
>M32294-1|AAA36582.1| 417|Homo sapiens protein ( Human Ro
ribonucleoprotein autoantigen (Ro/SS-A), complete cds.
).
Length = 417
Score = 128 bits (309), Expect = 1e-29
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
I NP+YKG W P+QIDNP YKG WIHPEIDNPEY+PD ++Y D +GLDLWQVKSGT
Sbjct: 266 IQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGT 325
Query: 243 IFNNFLFTDDPALAKEKG-EIIKKMQEGEKKMK 338
IF+NFL T+D A A+E G E + EK+MK
Sbjct: 326 IFDNFLITNDEAYAEEFGNETWGVTKAAEKQMK 358
>CR457070-1|CAG33351.1| 417|Homo sapiens CALR protein.
Length = 417
Score = 128 bits (309), Expect = 1e-29
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
I NP+YKG W P+QIDNP YKG WIHPEIDNPEY+PD ++Y D +GLDLWQVKSGT
Sbjct: 266 IQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGT 325
Query: 243 IFNNFLFTDDPALAKEKG-EIIKKMQEGEKKMK 338
IF+NFL T+D A A+E G E + EK+MK
Sbjct: 326 IFDNFLITNDEAYAEEFGNETWGVTKAAEKQMK 358
>BT007448-1|AAP36116.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 128 bits (309), Expect = 1e-29
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
I NP+YKG W P+QIDNP YKG WIHPEIDNPEY+PD ++Y D +GLDLWQVKSGT
Sbjct: 266 IQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGT 325
Query: 243 IFNNFLFTDDPALAKEKG-EIIKKMQEGEKKMK 338
IF+NFL T+D A A+E G E + EK+MK
Sbjct: 326 IFDNFLITNDEAYAEEFGNETWGVTKAAEKQMK 358
>BC020493-1|AAH20493.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 128 bits (309), Expect = 1e-29
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
I NP+YKG W P+QIDNP YKG WIHPEIDNPEY+PD ++Y D +GLDLWQVKSGT
Sbjct: 266 IQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGT 325
Query: 243 IFNNFLFTDDPALAKEKG-EIIKKMQEGEKKMK 338
IF+NFL T+D A A+E G E + EK+MK
Sbjct: 326 IFDNFLITNDEAYAEEFGNETWGVTKAAEKQMK 358
>BC007911-1|AAH07911.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 128 bits (309), Expect = 1e-29
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
I NP+YKG W P+QIDNP YKG WIHPEIDNPEY+PD ++Y D +GLDLWQVKSGT
Sbjct: 266 IQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGT 325
Query: 243 IFNNFLFTDDPALAKEKG-EIIKKMQEGEKKMK 338
IF+NFL T+D A A+E G E + EK+MK
Sbjct: 326 IFDNFLITNDEAYAEEFGNETWGVTKAAEKQMK 358
>BC002500-1|AAH02500.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 128 bits (309), Expect = 1e-29
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
I NP+YKG W P+QIDNP YKG WIHPEIDNPEY+PD ++Y D +GLDLWQVKSGT
Sbjct: 266 IQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGT 325
Query: 243 IFNNFLFTDDPALAKEKG-EIIKKMQEGEKKMK 338
IF+NFL T+D A A+E G E + EK+MK
Sbjct: 326 IFDNFLITNDEAYAEEFGNETWGVTKAAEKQMK 358
>AY047586-1|AAL13126.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 128 bits (309), Expect = 1e-29
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
I NP+YKG W P+QIDNP YKG WIHPEIDNPEY+PD ++Y D +GLDLWQVKSGT
Sbjct: 266 IQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGT 325
Query: 243 IFNNFLFTDDPALAKEKG-EIIKKMQEGEKKMK 338
IF+NFL T+D A A+E G E + EK+MK
Sbjct: 326 IFDNFLITNDEAYAEEFGNETWGVTKAAEKQMK 358
>AK223060-1|BAD96780.1| 406|Homo sapiens calreticulin precursor
variant protein.
Length = 406
Score = 128 bits (309), Expect = 1e-29
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
I NP+YKG W P+QIDNP YKG WIHPEIDNPEY+PD ++Y D +GLDLWQVKSGT
Sbjct: 255 IQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGT 314
Query: 243 IFNNFLFTDDPALAKEKG-EIIKKMQEGEKKMK 338
IF+NFL T+D A A+E G E + EK+MK
Sbjct: 315 IFDNFLITNDEAYAEEFGNETWGVTKAAEKQMK 347
>AD000092-6|AAB51176.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 128 bits (309), Expect = 1e-29
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
I NP+YKG W P+QIDNP YKG WIHPEIDNPEY+PD ++Y D +GLDLWQVKSGT
Sbjct: 266 IQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGT 325
Query: 243 IFNNFLFTDDPALAKEKG-EIIKKMQEGEKKMK 338
IF+NFL T+D A A+E G E + EK+MK
Sbjct: 326 IFDNFLITNDEAYAEEFGNETWGVTKAAEKQMK 358
>M94859-1|AAA21749.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 74.1 bits (174), Expect = 3e-13
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
IDNP+YKG W P IDNP+Y+G W +I NP++ D ++ ++GL+LW + S
Sbjct: 374 IDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDI 433
Query: 243 IFNNFLFTDDPALAKE---KGEIIKKMQEG 323
F+NF+ D + + G +KK +G
Sbjct: 434 FFDNFIICADRRIVDDWANDGWGLKKAADG 463
>L18887-1|AAA21013.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 74.1 bits (174), Expect = 3e-13
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
IDNP+YKG W P IDNP+Y+G W +I NP++ D ++ ++GL+LW + S
Sbjct: 374 IDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDI 433
Query: 243 IFNNFLFTDDPALAKE---KGEIIKKMQEG 323
F+NF+ D + + G +KK +G
Sbjct: 434 FFDNFIICADRRIVDDWANDGWGLKKAADG 463
>L10284-1|AAA36125.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 74.1 bits (174), Expect = 3e-13
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
IDNP+YKG W P IDNP+Y+G W +I NP++ D ++ ++GL+LW + S
Sbjct: 374 IDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDI 433
Query: 243 IFNNFLFTDDPALAKE---KGEIIKKMQEG 323
F+NF+ D + + G +KK +G
Sbjct: 434 FFDNFIICADRRIVDDWANDGWGLKKAADG 463
>BC042843-1|AAH42843.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 74.1 bits (174), Expect = 3e-13
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
IDNP+YKG W P IDNP+Y+G W +I NP++ D ++ ++GL+LW + S
Sbjct: 374 IDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDI 433
Query: 243 IFNNFLFTDDPALAKE---KGEIIKKMQEG 323
F+NF+ D + + G +KK +G
Sbjct: 434 FFDNFIICADRRIVDDWANDGWGLKKAADG 463
>BC003552-1|AAH03552.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 74.1 bits (174), Expect = 3e-13
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
IDNP+YKG W P IDNP+Y+G W +I NP++ D ++ ++GL+LW + S
Sbjct: 374 IDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDI 433
Query: 243 IFNNFLFTDDPALAKE---KGEIIKKMQEG 323
F+NF+ D + + G +KK +G
Sbjct: 434 FFDNFIICADRRIVDDWANDGWGLKKAADG 463
>AJ271880-1|CAB72137.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 74.1 bits (174), Expect = 3e-13
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
IDNP+YKG W P IDNP+Y+G W +I NP++ D ++ ++GL+LW + S
Sbjct: 374 IDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDI 433
Query: 243 IFNNFLFTDDPALAKE---KGEIIKKMQEG 323
F+NF+ D + + G +KK +G
Sbjct: 434 FFDNFIICADRRIVDDWANDGWGLKKAADG 463
>D86322-1|BAA22590.1| 610|Homo sapiens calmegin protein.
Length = 610
Score = 73.7 bits (173), Expect = 4e-13
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
IDNP YKGVW P +DNP Y+G W +I NP+Y D + + ++GL+LW + S
Sbjct: 363 IDNPKYKGVWRPPLVDNPNYQGIWSPRKIPNPDYFEDDHPFLLTSFSALGLELWSMTSDI 422
Query: 243 IFNNFLFTDDPALA 284
F+NF+ + +A
Sbjct: 423 YFDNFIICSEKEVA 436
>BC028357-1|AAH28357.1| 610|Homo sapiens calmegin protein.
Length = 610
Score = 73.7 bits (173), Expect = 4e-13
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
IDNP YKGVW P +DNP Y+G W +I NP+Y D + + ++GL+LW + S
Sbjct: 363 IDNPKYKGVWRPPLVDNPNYQGIWSPRKIPNPDYFEDDHPFLLTSFSALGLELWSMTSDI 422
Query: 243 IFNNFLFTDDPALA 284
F+NF+ + +A
Sbjct: 423 YFDNFIICSEKEVA 436
>M98452-1|AAA35696.1| 356|Homo sapiens calnexin protein.
Length = 356
Score = 70.9 bits (166), Expect = 3e-12
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
IDNP+YKG W P IDNP+Y+G W +I NP++ D ++ ++GL+LW +
Sbjct: 138 IDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTLTF 197
Query: 243 IFNNFLFTDDPALAKE---KGEIIKKMQEG 323
F+NF+ D + + G +KK +G
Sbjct: 198 FFDNFIICADRRIVDDWANDGWGLKKAADG 227
>BC014595-1|AAH14595.1| 384|Homo sapiens calreticulin 3 protein.
Length = 384
Score = 62.9 bits (146), Expect = 7e-10
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Frame = +3
Query: 69 NPDYKGVWAPKQIDNPAY----------KGPWIHPEIDNPEYTPDSNLYKRDEICSVGLD 218
N D G W + P Y K W+H ++ N +Y +L + + I ++GL+
Sbjct: 244 NGDLDGDWPAPMLQKPPYQDGLKPEGIHKDVWLHRKMKNTDYLTQYDLSEFENIGAIGLE 303
Query: 219 LWQVKSGTIFNNFLFTDDPALAKEKGE 299
LWQV+SGTIF+NFL TDD A G+
Sbjct: 304 LWQVRSGTIFDNFLITDDEEYADNFGK 330
>AK058084-1|BAB71655.1| 384|Homo sapiens protein ( Homo sapiens
cDNA FLJ25355 fis, clone TST01593. ).
Length = 384
Score = 62.9 bits (146), Expect = 7e-10
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Frame = +3
Query: 69 NPDYKGVWAPKQIDNPAY----------KGPWIHPEIDNPEYTPDSNLYKRDEICSVGLD 218
N D G W + P Y K W+H ++ N +Y +L + + I ++GL+
Sbjct: 244 NGDLDGDWPAPMLQKPPYQDGLKPEGIHKDVWLHRKMKNTDYLTQYDLSEFENIGAIGLE 303
Query: 219 LWQVKSGTIFNNFLFTDDPALAKEKGE 299
LWQV+SGTIF+NFL TDD A G+
Sbjct: 304 LWQVRSGTIFDNFLITDDEEYADNFGK 330
>AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens
cDNA FLJ12547 fis, clone NT2RM4000634. ).
Length = 307
Score = 33.5 bits (73), Expect = 0.52
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 468 VCACVCQDNTCTDGYYLAY-VCVCVGV-LCACI 560
VCACVC C G +L VC+CVG LC C+
Sbjct: 112 VCACVC-GCLCVCGAHLCVCVCLCVGAHLCVCL 143
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 33.1 bits (72), Expect = 0.69
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 468 VCACVCQD-NTCTDGYYLAYVCVCVGVLCACI 560
VC C+C C Y Y+CVC+ V C C+
Sbjct: 157 VCVCLCVSVYVCVSSYLCVYLCVCMYV-CECV 187
>AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ45585 fis, clone BRTHA3013882. ).
Length = 201
Score = 30.7 bits (66), Expect = 3.7
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 465 SVCACVCQDNTCTDGYYLAYVCVCVGV-LCACI 560
SVC CVC + C +CVCV V LC C+
Sbjct: 57 SVCLCVCLVSVC----LCVCLCVCVSVCLCVCL 85
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 468 VCACVCQDNTCTDGYYLAYVCVCVGVLCACI 560
VC CVC C +CVCV V C C+
Sbjct: 12 VCVCVCVCVLCVSVCVCVCLCVCVCV-CVCL 41
>AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ44936 fis, clone BRAMY3018121. ).
Length = 175
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -1
Query: 559 MHAH-NTPTHTHTYAK*YPSVHVLS-*HTHAQT 467
MHAH +T THTHT+A +H + HTH T
Sbjct: 1 MHAHIHTCTHTHTHAHIRTCIHTCTDTHTHMHT 33
>AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ45698 fis, clone FEBRA2017811. ).
Length = 415
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -1
Query: 565 VSMHAHNTPTHTHTYAK*YPSVHVLS-*HTHAQT 467
+ MH H T THTHTY + +H+ + HT+ T
Sbjct: 297 IHMHMH-THTHTHTYTHAHAHIHINTYMHTYTYT 329
>AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ41637 fis, clone FEBRA1000030, weakly similar
to T-CELL RECEPTOR BETA CHAIN ANA 11. ).
Length = 207
Score = 29.5 bits (63), Expect = 8.5
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 565 VSMHAH-NTPTHTHTYAK*YPSVHVLS*HTHA 473
+S++ H +T THTHT+A Y H HTHA
Sbjct: 71 ISLYIHTHTHTHTHTHAVLYLPTHT---HTHA 99
>AK123032-1|BAC85519.1| 274|Homo sapiens factor. protein.
Length = 274
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 468 VCACVCQDNTCTDGYYLAYVCVCVGV 545
VC CVC + CT + YVC CV V
Sbjct: 88 VCICVCA-HVCTCVHSFVYVCGCVHV 112
>AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ39621 fis, clone SMINT2001158. ).
Length = 226
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1
Query: 547 NTPTHTHTYAK*YPSVHVLS*HTHAQT 467
+TPTHTHT+A + H+ + H H+ T
Sbjct: 164 HTPTHTHTHALTHSHTHIHT-HMHSHT 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,910,116
Number of Sequences: 237096
Number of extensions: 1128264
Number of successful extensions: 2653
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2605
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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