Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_C16
(565 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 99 1e-21
At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to SP|Q... 99 2e-21
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 91 4e-19
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 91 4e-19
At5g07340.1 68418.m00838 calnexin, putative identical to calnexi... 66 1e-11
At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin... 66 2e-11
At2g17150.1 68415.m01980 RWP-RK domain-containing protein simila... 26 0.31
At3g16910.1 68416.m02162 AMP-dependent synthetase and ligase fam... 27 6.5
At2g46710.1 68415.m05828 rac GTPase activating protein, putative... 27 6.5
At4g23150.1 68417.m03341 protein kinase family protein contains ... 27 8.7
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 99 bits (238), Expect = 1e-21
Identities = 43/79 (54%), Positives = 55/79 (69%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
I NP+Y G W PK+I NPAYKG W P IDNPE+ D LY ++ VG++LWQVKSG+
Sbjct: 270 IPNPEYNGEWKPKKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGS 329
Query: 243 IFNNFLFTDDPALAKEKGE 299
+F+N L +DDP AK+ E
Sbjct: 330 LFDNVLVSDDPEYAKKLAE 348
>At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to
SP|Q38858 Calreticulin 2 precursor {Arabidopsis
thaliana}
Length = 424
Score = 98.7 bits (235), Expect = 2e-21
Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
I NP+Y G W PKQI NP YKG W P IDNP++ D LY ++ VGL+LWQVKSG+
Sbjct: 270 IPNPEYMGEWKPKQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGS 329
Query: 243 IFNNFLFTDDPALAKE-KGEIIKKMQEGEK 329
+F+N L DDP AK+ E K+++ EK
Sbjct: 330 LFDNVLICDDPDYAKKLADETWGKLKDAEK 359
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
I N YKG W K+I NP YKG W +P IDNPE+ D +LY I G+++WQVK+G+
Sbjct: 222 IPNSAYKGPWKAKRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIEVWQVKAGS 281
Query: 243 IFNNFLFTDDPALAKE-KGEIIKKMQEGEKKM 335
IF+N L DDPA A+ + + +E EK++
Sbjct: 282 IFDNILICDDPAYARSIVDDYFAQHRESEKEL 313
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = +3
Query: 63 IDNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGT 242
I N YKG W K+I NP YKG W +P IDNPE+ D +LY I G+++WQVK+G+
Sbjct: 276 IPNSAYKGPWKAKRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIEVWQVKAGS 335
Query: 243 IFNNFLFTDDPALAKE-KGEIIKKMQEGEKKM 335
IF+N L DDPA A+ + + +E EK++
Sbjct: 336 IFDNILICDDPAYARSIVDDYFAQHRESEKEL 367
>At5g07340.1 68418.m00838 calnexin, putative identical to calnexin
homolog 2 from Arabidopsis thaliana [SP|Q38798], strong
similarity to calnexin homolog 1, Arabidopsis thaliana,
EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262
calreticulin family
Length = 532
Score = 66.5 bits (155), Expect = 1e-11
Identities = 28/73 (38%), Positives = 45/73 (61%)
Frame = +3
Query: 69 NPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGTIF 248
NP YKG W+ IDNPAYKG W +I NP+Y + + I ++G+++W ++ G +F
Sbjct: 325 NPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYF-ELERPNLEPIAAIGIEIWTMQDGILF 383
Query: 249 NNFLFTDDPALAK 287
+N L + D +A+
Sbjct: 384 DNILISKDEKVAE 396
>At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin
homolog 1, Arabidopsis thaliana, EMBL:AT08315
[SP|P29402]
Length = 530
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/73 (38%), Positives = 45/73 (61%)
Frame = +3
Query: 69 NPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGTIF 248
NP YKG W+ IDNPAYKG W +I NP+Y + + + I ++G+++W ++ G +F
Sbjct: 323 NPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYF-ELDRPDYEPIAAIGIEIWTMQDGILF 381
Query: 249 NNFLFTDDPALAK 287
+N L D +A+
Sbjct: 382 DNILIAKDEKVAE 394
>At2g17150.1 68415.m01980 RWP-RK domain-containing protein similar
to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 909
Score = 25.8 bits (54), Expect(2) = 0.31
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +3
Query: 87 VWAPKQIDNPAYKGPWIHPEIDNPEYT 167
+W P Q + ++ W P + N EY+
Sbjct: 148 IWVPIQQEGKSFLTTWAQPHLFNQEYS 174
Score = 24.6 bits (51), Expect(2) = 0.31
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 156 PEYTPDSNLYKRDE 197
PE+TPD ++RDE
Sbjct: 210 PEWTPDVRFFRRDE 223
>At3g16910.1 68416.m02162 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501; identical to cDNA adenosine monophosphate
binding protein 7 AMPBP7 (AMPBP7) GI:20799722
Length = 569
Score = 27.5 bits (58), Expect = 6.5
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = -1
Query: 280 RAGSSVKRKLLKMVPDLTCHKSRPTEHISSRLYRFESGVYSGLSISGWIHGPLYAGLSIC 101
+AGSS KR LL ++ D TC +S +E + +G W P SI
Sbjct: 143 KAGSSFKRPLLIVIGDHTCAPESLNRALSKGAIEYEDFLATGDPNYPW-QPPADEWQSIA 201
Query: 100 LG 95
LG
Sbjct: 202 LG 203
>At2g46710.1 68415.m05828 rac GTPase activating protein, putative
similar to rac GTPase activating protein 2 [Lotus
japonicus] GI:3695061; contains Pfam profiles PF00620:
RhoGAP domain, PF00786: P21-Rho-binding domain
Length = 455
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 66 DNPDYKGVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSN 179
+N D K W KQ +P+ + H EI +PE P++N
Sbjct: 331 ENADAKARWLKKQTSDPSEEWESQHSEILSPE-KPNNN 367
>At4g23150.1 68417.m03341 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 659
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 153 NPEYTPDSNLYKRDEICSVGLDLWQVKSGTIFNNFLFTDD 272
+PEY + ++ S G+ + ++ SG N+F+ TDD
Sbjct: 506 SPEYAMRGQFSMKSDVYSFGVLVLEIISGRKNNSFIETDD 545
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,039,442
Number of Sequences: 28952
Number of extensions: 155444
Number of successful extensions: 546
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1082538160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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