Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_C15
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.3  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   8.3  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 294 FRSNDYGAVSEPGTDIVLVGDDLSLYWTNPN 202
           FR   YG  S P + +V   + ++  WT  N
Sbjct: 35  FRVPTYGTTSHPTSKLVPPDERITYSWTEIN 65


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 294 FRSNDYGAVSEPGTDIVLVGDDLSLYWTNPN 202
           FR   YG  S P + +V   + ++  WT  N
Sbjct: 35  FRVPTYGTTSHPTSKLVPPDERITYSWTEIN 65


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 602  NLQTHLDASVATAPALHPTVMRAPI 528
            N + H DAS   AP+  P V   P+
Sbjct: 2281 NTECHPDASSTMAPSTTPMVPDKPV 2305


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 401 ISSLLSGAGTKSSLITSSALRSIIVNPPNVS 493
           ISS  S + T ++  TSSAL S  +   N+S
Sbjct: 2   ISSKFSPSTTTTTTTTSSALNSTPLIEFNIS 32


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 401 ISSLLSGAGTKSSLITSSALRSIIVNPPNVS 493
           ISS  S + T ++  TSSAL S  +   N+S
Sbjct: 2   ISSKFSPSTTTTTTTTSSALNSTPLIEFNIS 32


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 150 VWHILNTDTPVTRDRFLRVLSNLKRV 73
           V H++N D P + D ++  +    RV
Sbjct: 478 VQHVINYDLPKSIDEYVHRIGRTGRV 503


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,722
Number of Sequences: 336
Number of extensions: 3694
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)