Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_C15
(617 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 70 2e-12
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 70 2e-12
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 70 2e-12
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 70 2e-12
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 53 1e-07
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 53 1e-07
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 53 1e-07
AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical... 30 1.2
AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical... 30 1.2
AF024500-3|AAB70363.1| 314|Caenorhabditis elegans Hypothetical ... 30 1.2
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 29 2.0
AF022978-4|AAG24178.1| 383|Caenorhabditis elegans Hypothetical ... 29 3.5
AF038622-1|AAB94152.1| 358|Caenorhabditis elegans Hypothetical ... 28 6.1
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 69.7 bits (163), Expect = 2e-12
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
+FGL NP GC C+CSGVT C + Y R ++ + ++ +
Sbjct: 707 SFGLAPTNPQGCIPCFCSGVTQQC-SASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
Query: 435 DFVPAPDKSELMY-IFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSE 262
+ + F Q LYW LP F G+++ SYGG L +F N S+
Sbjct: 766 QTRAELSGQAIEFRSFEEARGQTLYWKLPEKFLGDKVTSYGGTLEYTFKFSGNGN---SD 822
Query: 261 PGTDIVLVGDDLSLYWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSNL 82
D++L G+D++L + + A Q+ + E W ++ TR+ L L++L
Sbjct: 823 QSADVILRGNDIALQYKHREPFYADRENKVQIKIIETSWQRVD-GQQATREHLLMTLADL 881
Query: 81 KRVLVRAT 58
+L+++T
Sbjct: 882 DTLLIKST 889
Score = 61.3 bits (142), Expect = 5e-10
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Frame = -3
Query: 612 FGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVINDD 433
F L +P GC +C+C GV++DC HY R GD G TI D+ E I+ +
Sbjct: 419 FHLSEKSPEGCLKCFCFGVSNDCRSSGHY-RTKDRLMFAGDA-EGVTISDIE-ERTIDRN 475
Query: 432 FVPAPDKSELMYIFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSEPG 256
+ K+ + YW LP F G+++ +YGG + EF + + + SEP
Sbjct: 476 TPFSFFKTGYLTFDGTTDGVAKYWRLPQRFLGDKVTAYGGKMEFEIEFSGSGHHS-SEP- 533
Query: 255 TDIVLVGDDLSLYWTNPNR---MNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSN 85
+VL G+ L N+ + + + V E + LN TR+ L VL++
Sbjct: 534 -MVVLKGNQNILVHRVRNQEHVLRSDSPVRITVETYETNYEQLN-GAAATREDLLMVLAD 591
Query: 84 LKRVLVRAT 58
L L+RAT
Sbjct: 592 LDAFLIRAT 600
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 69.7 bits (163), Expect = 2e-12
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
+FGL NP GC C+CSGVT C + Y R ++ + ++ +
Sbjct: 707 SFGLAPTNPQGCIPCFCSGVTQQC-SASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
Query: 435 DFVPAPDKSELMY-IFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSE 262
+ + F Q LYW LP F G+++ SYGG L +F N S+
Sbjct: 766 QTRAELSGQAIEFRSFEEARGQTLYWKLPEKFLGDKVTSYGGTLEYTFKFSGNGN---SD 822
Query: 261 PGTDIVLVGDDLSLYWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSNL 82
D++L G+D++L + + A Q+ + E W ++ TR+ L L++L
Sbjct: 823 QSADVILRGNDIALQYKHREPFYADRENKVQIKIIETSWQRVD-GQQATREHLLMTLADL 881
Query: 81 KRVLVRAT 58
+L+++T
Sbjct: 882 DTLLIKST 889
Score = 61.3 bits (142), Expect = 5e-10
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Frame = -3
Query: 612 FGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVINDD 433
F L +P GC +C+C GV++DC HY R GD G TI D+ E I+ +
Sbjct: 419 FHLSEKSPEGCLKCFCFGVSNDCRSSGHY-RTKDRLMFAGDA-EGVTISDIE-ERTIDRN 475
Query: 432 FVPAPDKSELMYIFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSEPG 256
+ K+ + YW LP F G+++ +YGG + EF + + + SEP
Sbjct: 476 TPFSFFKTGYLTFDGTTDGVAKYWRLPQRFLGDKVTAYGGKMEFEIEFSGSGHHS-SEP- 533
Query: 255 TDIVLVGDDLSLYWTNPNR---MNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSN 85
+VL G+ L N+ + + + V E + LN TR+ L VL++
Sbjct: 534 -MVVLKGNQNILVHRVRNQEHVLRSDSPVRITVETYETNYEQLN-GAAATREDLLMVLAD 591
Query: 84 LKRVLVRAT 58
L L+RAT
Sbjct: 592 LDAFLIRAT 600
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 69.7 bits (163), Expect = 2e-12
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
+FGL NP GC C+CSGVT C + Y R ++ + ++ +
Sbjct: 707 SFGLAPTNPQGCIPCFCSGVTQQC-SASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
Query: 435 DFVPAPDKSELMY-IFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSE 262
+ + F Q LYW LP F G+++ SYGG L +F N S+
Sbjct: 766 QTRAELSGQAIEFRSFEEARGQTLYWKLPEKFLGDKVTSYGGTLEYTFKFSGNGN---SD 822
Query: 261 PGTDIVLVGDDLSLYWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSNL 82
D++L G+D++L + + A Q+ + E W ++ TR+ L L++L
Sbjct: 823 QSADVILRGNDIALQYKHREPFYADRENKVQIKIIETSWQRVD-GQQATREHLLMTLADL 881
Query: 81 KRVLVRAT 58
+L+++T
Sbjct: 882 DTLLIKST 889
Score = 61.3 bits (142), Expect = 5e-10
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Frame = -3
Query: 612 FGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVINDD 433
F L +P GC +C+C GV++DC HY R GD G TI D+ E I+ +
Sbjct: 419 FHLSEKSPEGCLKCFCFGVSNDCRSSGHY-RTKDRLMFAGDA-EGVTISDIE-ERTIDRN 475
Query: 432 FVPAPDKSELMYIFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSEPG 256
+ K+ + YW LP F G+++ +YGG + EF + + + SEP
Sbjct: 476 TPFSFFKTGYLTFDGTTDGVAKYWRLPQRFLGDKVTAYGGKMEFEIEFSGSGHHS-SEP- 533
Query: 255 TDIVLVGDDLSLYWTNPNR---MNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSN 85
+VL G+ L N+ + + + V E + LN TR+ L VL++
Sbjct: 534 -MVVLKGNQNILVHRVRNQEHVLRSDSPVRITVETYETNYEQLN-GAAATREDLLMVLAD 591
Query: 84 LKRVLVRAT 58
L L+RAT
Sbjct: 592 LDAFLIRAT 600
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 69.7 bits (163), Expect = 2e-12
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
+FGL NP GC C+CSGVT C + Y R ++ + ++ +
Sbjct: 707 SFGLAPTNPQGCIPCFCSGVTQQC-SASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
Query: 435 DFVPAPDKSELMY-IFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSE 262
+ + F Q LYW LP F G+++ SYGG L +F N S+
Sbjct: 766 QTRAELSGQAIEFRSFEEARGQTLYWKLPEKFLGDKVTSYGGTLEYTFKFSGNGN---SD 822
Query: 261 PGTDIVLVGDDLSLYWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSNL 82
D++L G+D++L + + A Q+ + E W ++ TR+ L L++L
Sbjct: 823 QSADVILRGNDIALQYKHREPFYADRENKVQIKIIETSWQRVD-GQQATREHLLMTLADL 881
Query: 81 KRVLVRAT 58
+L+++T
Sbjct: 882 DTLLIKST 889
Score = 61.3 bits (142), Expect = 5e-10
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Frame = -3
Query: 612 FGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVINDD 433
F L +P GC +C+C GV++DC HY R GD G TI D+ E I+ +
Sbjct: 419 FHLSEKSPEGCLKCFCFGVSNDCRSSGHY-RTKDRLMFAGDA-EGVTISDIE-ERTIDRN 475
Query: 432 FVPAPDKSELMYIFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSEPG 256
+ K+ + YW LP F G+++ +YGG + EF + + + SEP
Sbjct: 476 TPFSFFKTGYLTFDGTTDGVAKYWRLPQRFLGDKVTAYGGKMEFEIEFSGSGHHS-SEP- 533
Query: 255 TDIVLVGDDLSLYWTNPNR---MNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSN 85
+VL G+ L N+ + + + V E + LN TR+ L VL++
Sbjct: 534 -MVVLKGNQNILVHRVRNQEHVLRSDSPVRITVETYETNYEQLN-GAAATREDLLMVLAD 591
Query: 84 LKRVLVRAT 58
L L+RAT
Sbjct: 592 LDAFLIRAT 600
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical protein
ZC101.2b protein.
Length = 1160
Score = 69.7 bits (163), Expect = 2e-12
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
+FGL NP GC C+CSGVT C + Y R ++ + ++ +
Sbjct: 707 SFGLAPTNPQGCIPCFCSGVTQQC-SASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
Query: 435 DFVPAPDKSELMY-IFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSE 262
+ + F Q LYW LP F G+++ SYGG L +F N S+
Sbjct: 766 QTRAELSGQAIEFRSFEEARGQTLYWKLPEKFLGDKVTSYGGTLEYTFKFSGNGN---SD 822
Query: 261 PGTDIVLVGDDLSLYWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSNL 82
D++L G+D++L + + A Q+ + E W ++ TR+ L L++L
Sbjct: 823 QSADVILRGNDIALQYKHREPFYADRENKVQIKIIETSWQRVD-GQQATREHLLMTLADL 881
Query: 81 KRVLVRAT 58
+L+++T
Sbjct: 882 DTLLIKST 889
Score = 61.3 bits (142), Expect = 5e-10
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Frame = -3
Query: 612 FGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVINDD 433
F L +P GC +C+C GV++DC HY R GD G TI D+ E I+ +
Sbjct: 419 FHLSEKSPEGCLKCFCFGVSNDCRSSGHY-RTKDRLMFAGDA-EGVTISDIE-ERTIDRN 475
Query: 432 FVPAPDKSELMYIFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSEPG 256
+ K+ + YW LP F G+++ +YGG + EF + + + SEP
Sbjct: 476 TPFSFFKTGYLTFDGTTDGVAKYWRLPQRFLGDKVTAYGGKMEFEIEFSGSGHHS-SEP- 533
Query: 255 TDIVLVGDDLSLYWTNPNR---MNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSN 85
+VL G+ L N+ + + + V E + LN TR+ L VL++
Sbjct: 534 -MVVLKGNQNILVHRVRNQEHVLRSDSPVRITVETYETNYEQLN-GAAATREDLLMVLAD 591
Query: 84 LKRVLVRAT 58
L L+RAT
Sbjct: 592 LDAFLIRAT 600
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 69.7 bits (163), Expect = 2e-12
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
+FGL NP GC C+CSGVT C + Y R ++ + ++ +
Sbjct: 707 SFGLAPTNPQGCIPCFCSGVTQQC-SASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
Query: 435 DFVPAPDKSELMY-IFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSE 262
+ + F Q LYW LP F G+++ SYGG L +F N S+
Sbjct: 766 QTRAELSGQAIEFRSFEEARGQTLYWKLPEKFLGDKVTSYGGTLEYTFKFSGNGN---SD 822
Query: 261 PGTDIVLVGDDLSLYWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSNL 82
D++L G+D++L + + A Q+ + E W ++ TR+ L L++L
Sbjct: 823 QSADVILRGNDIALQYKHREPFYADRENKVQIKIIETSWQRVD-GQQATREHLLMTLADL 881
Query: 81 KRVLVRAT 58
+L+++T
Sbjct: 882 DTLLIKST 889
Score = 61.3 bits (142), Expect = 5e-10
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Frame = -3
Query: 612 FGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVINDD 433
F L +P GC +C+C GV++DC HY R GD G TI D+ E I+ +
Sbjct: 419 FHLSEKSPEGCLKCFCFGVSNDCRSSGHY-RTKDRLMFAGDA-EGVTISDIE-ERTIDRN 475
Query: 432 FVPAPDKSELMYIFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSEPG 256
+ K+ + YW LP F G+++ +YGG + EF + + + SEP
Sbjct: 476 TPFSFFKTGYLTFDGTTDGVAKYWRLPQRFLGDKVTAYGGKMEFEIEFSGSGHHS-SEP- 533
Query: 255 TDIVLVGDDLSLYWTNPNR---MNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSN 85
+VL G+ L N+ + + + V E + LN TR+ L VL++
Sbjct: 534 -MVVLKGNQNILVHRVRNQEHVLRSDSPVRITVETYETNYEQLN-GAAATREDLLMVLAD 591
Query: 84 LKRVLVRAT 58
L L+RAT
Sbjct: 592 LDAFLIRAT 600
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 69.7 bits (163), Expect = 2e-12
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
+FGL NP GC C+CSGVT C + Y R ++ + ++ +
Sbjct: 707 SFGLAPTNPQGCIPCFCSGVTQQC-SASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
Query: 435 DFVPAPDKSELMY-IFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSE 262
+ + F Q LYW LP F G+++ SYGG L +F N S+
Sbjct: 766 QTRAELSGQAIEFRSFEEARGQTLYWKLPEKFLGDKVTSYGGTLEYTFKFSGNGN---SD 822
Query: 261 PGTDIVLVGDDLSLYWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSNL 82
D++L G+D++L + + A Q+ + E W ++ TR+ L L++L
Sbjct: 823 QSADVILRGNDIALQYKHREPFYADRENKVQIKIIETSWQRVD-GQQATREHLLMTLADL 881
Query: 81 KRVLVRAT 58
+L+++T
Sbjct: 882 DTLLIKST 889
Score = 61.3 bits (142), Expect = 5e-10
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Frame = -3
Query: 612 FGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVINDD 433
F L +P GC +C+C GV++DC HY R GD G TI D+ E I+ +
Sbjct: 419 FHLSEKSPEGCLKCFCFGVSNDCRSSGHY-RTKDRLMFAGDA-EGVTISDIE-ERTIDRN 475
Query: 432 FVPAPDKSELMYIFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSEPG 256
+ K+ + YW LP F G+++ +YGG + EF + + + SEP
Sbjct: 476 TPFSFFKTGYLTFDGTTDGVAKYWRLPQRFLGDKVTAYGGKMEFEIEFSGSGHHS-SEP- 533
Query: 255 TDIVLVGDDLSLYWTNPNR---MNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSN 85
+VL G+ L N+ + + + V E + LN TR+ L VL++
Sbjct: 534 -MVVLKGNQNILVHRVRNQEHVLRSDSPVRITVETYETNYEQLN-GAAATREDLLMVLAD 591
Query: 84 LKRVLVRAT 58
L L+RAT
Sbjct: 592 LDAFLIRAT 600
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 69.7 bits (163), Expect = 2e-12
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
+FGL NP GC C+CSGVT C + Y R ++ + ++ +
Sbjct: 707 SFGLAPTNPQGCIPCFCSGVTQQC-SASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
Query: 435 DFVPAPDKSELMY-IFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSE 262
+ + F Q LYW LP F G+++ SYGG L +F N S+
Sbjct: 766 QTRAELSGQAIEFRSFEEARGQTLYWKLPEKFLGDKVTSYGGTLEYTFKFSGNGN---SD 822
Query: 261 PGTDIVLVGDDLSLYWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSNL 82
D++L G+D++L + + A Q+ + E W ++ TR+ L L++L
Sbjct: 823 QSADVILRGNDIALQYKHREPFYADRENKVQIKIIETSWQRVD-GQQATREHLLMTLADL 881
Query: 81 KRVLVRAT 58
+L+++T
Sbjct: 882 DTLLIKST 889
Score = 61.3 bits (142), Expect = 5e-10
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Frame = -3
Query: 612 FGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVINDD 433
F L +P GC +C+C GV++DC HY R GD G TI D+ E I+ +
Sbjct: 419 FHLSEKSPEGCLKCFCFGVSNDCRSSGHY-RTKDRLMFAGDA-EGVTISDIE-ERTIDRN 475
Query: 432 FVPAPDKSELMYIFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSEPG 256
+ K+ + YW LP F G+++ +YGG + EF + + + SEP
Sbjct: 476 TPFSFFKTGYLTFDGTTDGVAKYWRLPQRFLGDKVTAYGGKMEFEIEFSGSGHHS-SEP- 533
Query: 255 TDIVLVGDDLSLYWTNPNR---MNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSN 85
+VL G+ L N+ + + + V E + LN TR+ L VL++
Sbjct: 534 -MVVLKGNQNILVHRVRNQEHVLRSDSPVRITVETYETNYEQLN-GAAATREDLLMVLAD 591
Query: 84 LKRVLVRAT 58
L L+RAT
Sbjct: 592 LDAFLIRAT 600
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 69.7 bits (163), Expect = 2e-12
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
+FGL NP GC C+CSGVT C + Y R ++ + ++ +
Sbjct: 707 SFGLAPTNPQGCIPCFCSGVTQQC-SASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
Query: 435 DFVPAPDKSELMY-IFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSE 262
+ + F Q LYW LP F G+++ SYGG L +F N S+
Sbjct: 766 QTRAELSGQAIEFRSFEEARGQTLYWKLPEKFLGDKVTSYGGTLEYTFKFSGNGN---SD 822
Query: 261 PGTDIVLVGDDLSLYWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSNL 82
D++L G+D++L + + A Q+ + E W ++ TR+ L L++L
Sbjct: 823 QSADVILRGNDIALQYKHREPFYADRENKVQIKIIETSWQRVD-GQQATREHLLMTLADL 881
Query: 81 KRVLVRAT 58
+L+++T
Sbjct: 882 DTLLIKST 889
Score = 61.3 bits (142), Expect = 5e-10
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Frame = -3
Query: 612 FGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVINDD 433
F L +P GC +C+C GV++DC HY R GD G TI D+ E I+ +
Sbjct: 419 FHLSEKSPEGCLKCFCFGVSNDCRSSGHY-RTKDRLMFAGDA-EGVTISDIE-ERTIDRN 475
Query: 432 FVPAPDKSELMYIFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSEPG 256
+ K+ + YW LP F G+++ +YGG + EF + + + SEP
Sbjct: 476 TPFSFFKTGYLTFDGTTDGVAKYWRLPQRFLGDKVTAYGGKMEFEIEFSGSGHHS-SEP- 533
Query: 255 TDIVLVGDDLSLYWTNPNR---MNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSN 85
+VL G+ L N+ + + + V E + LN TR+ L VL++
Sbjct: 534 -MVVLKGNQNILVHRVRNQEHVLRSDSPVRITVETYETNYEQLN-GAAATREDLLMVLAD 591
Query: 84 LKRVLVRAT 58
L L+RAT
Sbjct: 592 LDAFLIRAT 600
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 69.7 bits (163), Expect = 2e-12
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 5/191 (2%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
T L ++NPLGCQ C+C G +S C +G + + I I G+ + DL
Sbjct: 514 TIHLSASNPLGCQPCFCFGHSSTCTQG-KWNKAQIINNI------GWHLTDLTG----GK 562
Query: 435 DFVPAPDKSELMYIFSFVPHQE---LYWSLP-VFPGNRILSYGGFLYLRQEFRSNDYGAV 268
D P + E++ +F+ +Q+ YW P F GN + SYGG+L+ + + GA
Sbjct: 563 DVKPEVENGEVL-MFNANQNQDRSLYYWKAPDSFKGNMLNSYGGYLHYDVYYVPTEQGAT 621
Query: 267 SEPGTDIVLVGDDLSLYWTNPNRMNAGWSLTYQVPLRE-HVWHILNTDTPVTRDRFLRVL 91
D+ + G+ + + + + +T +P+ E W+ +PV + +R L
Sbjct: 622 VFV-ADVAIEGNGIKIEYHSRIEFLPREKMTVAIPMSELSGWYNAEARSPVDKADMMRAL 680
Query: 90 SNLKRVLVRAT 58
+N+ R VRAT
Sbjct: 681 ANVDRFTVRAT 691
Score = 33.9 bits (74), Expect = 0.093
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHE 538
TF L+S+N GC C+C TS+C +
Sbjct: 1270 TFSLDSSNLKGCTECFCFNRTSNCEQ 1295
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 69.7 bits (163), Expect = 2e-12
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
+FGL NP GC C+CSGVT C + Y R ++ + ++ +
Sbjct: 706 SFGLAPTNPQGCIPCFCSGVTQQC-SASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 764
Query: 435 DFVPAPDKSELMY-IFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSE 262
+ + F Q LYW LP F G+++ SYGG L +F N S+
Sbjct: 765 QTRAELSGQAIEFRSFEEARGQTLYWKLPEKFLGDKVTSYGGTLEYTFKFSGNGN---SD 821
Query: 261 PGTDIVLVGDDLSLYWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSNL 82
D++L G+D++L + + A Q+ + E W ++ TR+ L L++L
Sbjct: 822 QSADVILRGNDIALQYKHREPFYADRENKVQIKIIETSWQRVD-GQQATREHLLMTLADL 880
Query: 81 KRVLVRAT 58
+L+++T
Sbjct: 881 DTLLIKST 888
Score = 57.2 bits (132), Expect = 9e-09
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Frame = -3
Query: 612 FGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVINDD 433
F L +P GC +C+C GV++DC HY R GD G TI D+ E I+ +
Sbjct: 419 FHLSEKSPEGCLKCFCFGVSNDCRSSGHY-RTKDRLMFAGDA-EGVTISDIE-ERTIDRN 475
Query: 432 FVPAPDKSELMYIFSFVPHQELYWSLPV-FPGNRILSYGGFLYLRQEFRSNDYGAVSEPG 256
+ K+ + YW LP F G+++ +YGG + EF + + + SEP
Sbjct: 476 TPFSFFKTGYLTFDGTTDGVAKYWRLPQRFLGDKV-TYGGKMEFEIEFSGSGHHS-SEP- 532
Query: 255 TDIVLVGDDLSLYWTNPNR---MNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSN 85
+VL G+ L N+ + + + V E + LN TR+ L VL++
Sbjct: 533 -MVVLKGNQNILVHPVRNQEHVLRSDSPVRITVETYETNYEQLN-GAAATREDLLMVLAD 590
Query: 84 LKRVLVRAT 58
L L+RAT
Sbjct: 591 LDAFLIRAT 599
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 69.7 bits (163), Expect = 2e-12
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 5/191 (2%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
T L ++NPLGCQ C+C G +S C +G + + I I G+ + DL
Sbjct: 514 TIHLSASNPLGCQPCFCFGHSSTCTQG-KWNKAQIINNI------GWHLTDLTG----GK 562
Query: 435 DFVPAPDKSELMYIFSFVPHQE---LYWSLP-VFPGNRILSYGGFLYLRQEFRSNDYGAV 268
D P + E++ +F+ +Q+ YW P F GN + SYGG+L+ + + GA
Sbjct: 563 DVKPEVENGEVL-MFNANQNQDRSLYYWKAPDSFKGNMLNSYGGYLHYDVYYVPTEQGAT 621
Query: 267 SEPGTDIVLVGDDLSLYWTNPNRMNAGWSLTYQVPLRE-HVWHILNTDTPVTRDRFLRVL 91
D+ + G+ + + + + +T +P+ E W+ +PV + +R L
Sbjct: 622 VFV-ADVAIEGNGIKIEYHSRIEFLPREKMTVAIPMSELSGWYNAEARSPVDKADMMRAL 680
Query: 90 SNLKRVLVRAT 58
+N+ R VRAT
Sbjct: 681 ANVDRFTVRAT 691
Score = 33.9 bits (74), Expect = 0.093
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHE 538
TF L+S+N GC C+C TS+C +
Sbjct: 1270 TFSLDSSNLKGCTECFCFNRTSNCEQ 1295
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 69.7 bits (163), Expect = 2e-12
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 5/191 (2%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
T L ++NPLGCQ C+C G +S C +G + + I I G+ + DL
Sbjct: 514 TIHLSASNPLGCQPCFCFGHSSTCTQG-KWNKAQIINNI------GWHLTDLTG----GK 562
Query: 435 DFVPAPDKSELMYIFSFVPHQE---LYWSLP-VFPGNRILSYGGFLYLRQEFRSNDYGAV 268
D P + E++ +F+ +Q+ YW P F GN + SYGG+L+ + + GA
Sbjct: 563 DVKPEVENGEVL-MFNANQNQDRSLYYWKAPDSFKGNMLNSYGGYLHYDVYYVPTEQGAT 621
Query: 267 SEPGTDIVLVGDDLSLYWTNPNRMNAGWSLTYQVPLRE-HVWHILNTDTPVTRDRFLRVL 91
D+ + G+ + + + + +T +P+ E W+ +PV + +R L
Sbjct: 622 VFV-ADVAIEGNGIKIEYHSRIEFLPREKMTVAIPMSELSGWYNAEARSPVDKADMMRAL 680
Query: 90 SNLKRVLVRAT 58
+N+ R VRAT
Sbjct: 681 ANVDRFTVRAT 691
Score = 33.9 bits (74), Expect = 0.093
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHE 538
TF L+S+N GC C+C TS+C +
Sbjct: 1270 TFSLDSSNLKGCTECFCFNRTSNCEQ 1295
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 53.2 bits (122), Expect = 1e-07
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 1/187 (0%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
TF L + NPLGC C+C GVT C + P+ I+ F D N + D
Sbjct: 1591 TFDLSAENPLGCVNCFCFGVTDSCRSSMY----PVT--IMSVDMSSFLTTDDNGMVDNKD 1644
Query: 435 DFVPAPDKSELMYIFSFVPHQELYWSLPVFPGNRILSYGGFLYLRQEFRSNDYGAVSEPG 256
D V +Y +Y+++P+ + SYG L +
Sbjct: 1645 DTV--------IYTSEETSPNSVYFNVPIEKKDYTTSYGLKLTFKLSTVPRGGRKSMNAD 1696
Query: 255 TDIVLVGDDLSL-YWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSNLK 79
D+ L G ++++ YW + N T + L + T VTR+ ++VL +L+
Sbjct: 1697 ADVRLTGANMTIEYWASEQPTNPEEQFTVKCKLVPENFLTAEGKT-VTREELMKVLHSLQ 1755
Query: 78 RVLVRAT 58
+ ++A+
Sbjct: 1756 NITLKAS 1762
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 53.2 bits (122), Expect = 1e-07
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 1/187 (0%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
TF L + NPLGC C+C GVT C + P+ I+ F D N + D
Sbjct: 1591 TFDLSAENPLGCVNCFCFGVTDSCRSSMY----PVT--IMSVDMSSFLTTDDNGMVDNKD 1644
Query: 435 DFVPAPDKSELMYIFSFVPHQELYWSLPVFPGNRILSYGGFLYLRQEFRSNDYGAVSEPG 256
D V +Y +Y+++P+ + SYG L +
Sbjct: 1645 DTV--------IYTSEETSPNSVYFNVPIEKKDYTTSYGLKLTFKLSTVPRGGRKSMNAD 1696
Query: 255 TDIVLVGDDLSL-YWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSNLK 79
D+ L G ++++ YW + N T + L + T VTR+ ++VL +L+
Sbjct: 1697 ADVRLTGANMTIEYWASEQPTNPEEQFTVKCKLVPENFLTAEGKT-VTREELMKVLHSLQ 1755
Query: 78 RVLVRAT 58
+ ++A+
Sbjct: 1756 NITLKAS 1762
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 53.2 bits (122), Expect = 1e-07
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 1/187 (0%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
TF L + NPLGC C+C GVT C + P+ I+ F D N + D
Sbjct: 1591 TFDLSAENPLGCVNCFCFGVTDSCRSSMY----PVT--IMSVDMSSFLTTDDNGMVDNKD 1644
Query: 435 DFVPAPDKSELMYIFSFVPHQELYWSLPVFPGNRILSYGGFLYLRQEFRSNDYGAVSEPG 256
D V +Y +Y+++P+ + SYG L +
Sbjct: 1645 DTV--------IYTSEETSPNSVYFNVPIEKKDYTTSYGLKLTFKLSTVPRGGRKSMNAD 1696
Query: 255 TDIVLVGDDLSL-YWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSNLK 79
D+ L G ++++ YW + N T + L + T VTR+ ++VL +L+
Sbjct: 1697 ADVRLTGANMTIEYWASEQPTNPEEQFTVKCKLVPENFLTAEGKT-VTREELMKVLHSLQ 1755
Query: 78 RVLVRAT 58
+ ++A+
Sbjct: 1756 NITLKAS 1762
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 53.2 bits (122), Expect = 1e-07
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 1/187 (0%)
Frame = -3
Query: 615 TFGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAAPILGDTFGGFTIMDLNAELVIND 436
TF L + NPLGC C+C GVT C + P+ I+ F D N + D
Sbjct: 1591 TFDLSAENPLGCVNCFCFGVTDSCRSSMY----PVT--IMSVDMSSFLTTDDNGMVDNKD 1644
Query: 435 DFVPAPDKSELMYIFSFVPHQELYWSLPVFPGNRILSYGGFLYLRQEFRSNDYGAVSEPG 256
D V +Y +Y+++P+ + SYG L +
Sbjct: 1645 DTV--------IYTSEETSPNSVYFNVPIEKKDYTTSYGLKLTFKLSTVPRGGRKSMNAD 1696
Query: 255 TDIVLVGDDLSL-YWTNPNRMNAGWSLTYQVPLREHVWHILNTDTPVTRDRFLRVLSNLK 79
D+ L G ++++ YW + N T + L + T VTR+ ++VL +L+
Sbjct: 1697 ADVRLTGANMTIEYWASEQPTNPEEQFTVKCKLVPENFLTAEGKT-VTREELMKVLHSLQ 1755
Query: 78 RVLVRAT 58
+ ++A+
Sbjct: 1756 NITLKAS 1762
>AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical
protein Y105C5B.21b protein.
Length = 1084
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 294 FRSNDYGAVSEPGT-DIVLVG-DDLSLYWTNPNRMNAGWSLTYQVPLRE 154
F D G S PG D+V G ++++ W+ P + N G YQ+ +RE
Sbjct: 27 FLHEDSGIPSAPGVPDVVDAGIGEVTVVWSAPLQSNGGEVRGYQIEMRE 75
>AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical
protein Y105C5B.21a protein.
Length = 1254
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 294 FRSNDYGAVSEPGT-DIVLVG-DDLSLYWTNPNRMNAGWSLTYQVPLRE 154
F D G S PG D+V G ++++ W+ P + N G YQ+ +RE
Sbjct: 197 FLHEDSGIPSAPGVPDVVDAGIGEVTVVWSAPLQSNGGEVRGYQIEMRE 245
>AF024500-3|AAB70363.1| 314|Caenorhabditis elegans Hypothetical
protein K06H6.3 protein.
Length = 314
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 401 CISFHLSHTKNCIGLYLSSLVIGFYPTVDFCILDK 297
CIS + + N + Y SL IGF V C+ D+
Sbjct: 234 CISLVMKYADNVMKTYCQSLAIGFTSIVSICLGDR 268
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 612 FGLESANPLGCQRCYCSGVTSDCHEGAHYTRIPIAA 505
F L + N GC C+C G +S C+ Y + +++
Sbjct: 475 FDLSTENQFGCTPCFCFGHSSICNTADGYFAMNVSS 510
>AF022978-4|AAG24178.1| 383|Caenorhabditis elegans Hypothetical
protein T01G6.5 protein.
Length = 383
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -3
Query: 315 FLYLRQEFRSNDYGAVSEPGTDIVLVGDDLSLYWTNPNRMNAGW 184
FLY + F + G + E D + G+DL Y+T P + N +
Sbjct: 293 FLYAQNRFSGTEIGEICEKLQDGL--GNDLHNYYTKPEKKNRNY 334
>AF038622-1|AAB94152.1| 358|Caenorhabditis elegans Hypothetical
protein R07C12.3 protein.
Length = 358
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 390 SFVPHQELYWSLPVFPGNRILSYGGFLYL 304
S +P +YW LP++ N I+S GF L
Sbjct: 198 SRLPTVGIYWPLPLYAENSIVSGNGFTVL 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,150,846
Number of Sequences: 27780
Number of extensions: 339017
Number of successful extensions: 923
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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