Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_C14
         (507 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.7  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   3.6  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   4.8  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   6.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   6.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.3  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 324 CRNPAFWECTLSSNDPSLSRA 386
           CR P  WE T  S  P+  RA
Sbjct: 168 CRCPPDWEGTTLSQSPNRRRA 188


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +2

Query: 359 FQRPVAIKGKVEIRPMMYLALSYDHRLIDGREAVLFLRKVK 481
           F RP       E  P+  ++   D   ID  EAVL +  V+
Sbjct: 341 FGRPATFTCNFEGNPIKTISWLKDGHPIDHNEAVLRIESVR 381



 Score = 21.0 bits (42), Expect = 6.3
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = +2

Query: 338  ILGMHAIFQRPVAIKGKVEIRP 403
            I+  + ++ +PV+   K E++P
Sbjct: 1230 IVEYYTVYYKPVSTDDKTEVKP 1251


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 282 PLLIVNVPPCMSAGVKLP 229
           P+L+ +  PC+S G K P
Sbjct: 122 PVLVRDGKPCLSGGPKHP 139


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +1

Query: 256 RRNVHNKQWRRIRLVVIYANHKHAAILHSGNARY-LPTTRRYQGQGRNKTDDVSSALIRP 432
           ++N +  +  +I L +I             NAR  L    +   + +NKTDD   AL+  
Sbjct: 107 KKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDALVSD 166

Query: 433 QINR 444
             +R
Sbjct: 167 SDDR 170


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 419 LSYDHRLIDGREAVLFLRKVKAGVE 493
           L+ DH  +DG++  +F   +  G E
Sbjct: 223 LNTDHGFLDGQKPFIFQEVIDLGGE 247


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 419 LSYDHRLIDGREAVLFLRKVKAGVE 493
           L+ DH  +DG++  +F   +  G E
Sbjct: 224 LNTDHGFLDGQKPFIFQEVIDLGGE 248


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 118 YYFYFKVIAFC 86
           YYFY+  + FC
Sbjct: 259 YYFYYMHLLFC 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,708
Number of Sequences: 336
Number of extensions: 2687
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)