Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_C14
         (507 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   3.2  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   5.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   5.6  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              21   9.7  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 441 INLWSYESARYIIGLI 394
           I LW +E+A+Y + +I
Sbjct: 75  IALWKFETAKYYVTII 90


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 226 NW*FNTSGHARRNVHNKQ 279
           +W +   G  RRNV NKQ
Sbjct: 175 HWIWTPHGWMRRNVLNKQ 192


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 260 GTFTISNGGVFGSLLSMPIINMPQSCI 340
           G F     GVF S+ S+ ++N+ ++ I
Sbjct: 535 GNFLSDINGVFTSIASLLLLNLSENHI 561


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 48  REEDARNGLEPVEQKAMTL 104
           +E+D RNG+  VE + + L
Sbjct: 43  KEDDFRNGIIDVENEKVQL 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,519
Number of Sequences: 438
Number of extensions: 3520
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)