Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_C13
         (557 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0627 + 5451140-5451839,5452635-5452662,5452730-5452786,545...    27   7.7  
06_01_0393 + 2831676-2831876,2831986-2832101,2832340-2832421,283...    27   7.7  

>08_01_0627 +
           5451140-5451839,5452635-5452662,5452730-5452786,
           5453205-5453874
          Length = 484

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 451 FSILYQRYQAVAKLWPILLELSMELCRHL 365
           F IL + + A  K +P+L EL + LC +L
Sbjct: 275 FDILDEGFSAAVKKFPLLEELELTLCDNL 303


>06_01_0393 +
           2831676-2831876,2831986-2832101,2832340-2832421,
           2832515-2832671,2832755-2832848,2833942-2834008,
           2834464-2835009
          Length = 420

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -1

Query: 437 SALPSCSKTVA--HPARTFHGALSAPQNTCYALSS 339
           S  P+C  TV+  HP R+F G+++ P     + S+
Sbjct: 244 SGNPTCGNTVSSVHPPRSFEGSMTIPAEAASSSSA 278


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,342,037
Number of Sequences: 37544
Number of extensions: 267666
Number of successful extensions: 521
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)