Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_C11
         (545 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    30   0.95 
Z50858-6|CAD44135.1|  949|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AL021567-6|CAD44122.1|  949|Caenorhabditis elegans Hypothetical ...    29   2.2  
AL021567-2|CAD44121.1|  947|Caenorhabditis elegans Hypothetical ...    29   2.2  
AL021567-1|CAA16508.2|  898|Caenorhabditis elegans Hypothetical ...    29   2.2  
AC006832-4|AAF39996.1|  485|Caenorhabditis elegans Hypothetical ...    27   6.7  
Z75529-4|CAA99787.1|  232|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = +1

Query: 1    PPR--VPRGNRSLCGKPRRLLYHQLSMLLKPVPVVSKPFSNMFLVHGLCSITPCISSELR 174
            PP+  VP+G ++     +R  Y +L    KP P    P S      G+ + TP I    +
Sbjct: 3406 PPQLEVPQGVQTYNPPSQRKYYTRLGREWKPPPKAKTPLSIRVPQSGVSTSTPAIDLSAK 3465

Query: 175  TMLFLPV 195
             +L  P+
Sbjct: 3466 EVLLAPI 3472


>Z50858-6|CAD44135.1|  949|Caenorhabditis elegans Hypothetical
           protein F21A10.2c protein.
          Length = 949

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = -1

Query: 467 MDEYDMDITYALYLDQAEMQKKKSDMVYVARMRRLNHQPFKVSIDVMSDKAVD 309
           + E  M I     ++++ ++K+K   +++   R L + P +V IDV S K V+
Sbjct: 805 LPELGMQIDERYCIEKSCVKKRKVYSLFIPMTRYLPNVPLEVQIDVPSSKVVN 857


>AL021567-6|CAD44122.1|  949|Caenorhabditis elegans Hypothetical
           protein F21A10.2c protein.
          Length = 949

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = -1

Query: 467 MDEYDMDITYALYLDQAEMQKKKSDMVYVARMRRLNHQPFKVSIDVMSDKAVD 309
           + E  M I     ++++ ++K+K   +++   R L + P +V IDV S K V+
Sbjct: 805 LPELGMQIDERYCIEKSCVKKRKVYSLFIPMTRYLPNVPLEVQIDVPSSKVVN 857


>AL021567-2|CAD44121.1|  947|Caenorhabditis elegans Hypothetical
           protein F21A10.2b protein.
          Length = 947

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = -1

Query: 467 MDEYDMDITYALYLDQAEMQKKKSDMVYVARMRRLNHQPFKVSIDVMSDKAVD 309
           + E  M I     ++++ ++K+K   +++   R L + P +V IDV S K V+
Sbjct: 803 LPELGMQIDERYCIEKSCVKKRKVYSLFIPMTRYLPNVPLEVQIDVPSSKVVN 855


>AL021567-1|CAA16508.2|  898|Caenorhabditis elegans Hypothetical
           protein F21A10.2a protein.
          Length = 898

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = -1

Query: 467 MDEYDMDITYALYLDQAEMQKKKSDMVYVARMRRLNHQPFKVSIDVMSDKAVD 309
           + E  M I     ++++ ++K+K   +++   R L + P +V IDV S K V+
Sbjct: 754 LPELGMQIDERYCIEKSCVKKRKVYSLFIPMTRYLPNVPLEVQIDVPSSKVVN 806


>AC006832-4|AAF39996.1|  485|Caenorhabditis elegans Hypothetical
           protein ZK355.4 protein.
          Length = 485

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 210 EAIDFEHVKAFVIDAHEAAHAIVFGTNKYTNDCVNSLI*HNI 335
           E +DF +  A+VI    A  AI+  +NKY  + + + + H I
Sbjct: 402 EGLDFLYKLAYVIAPDAARPAILIRSNKYLKNAILASLEHAI 443


>Z75529-4|CAA99787.1|  232|Caenorhabditis elegans Hypothetical
           protein C44H9.5 protein.
          Length = 232

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -1

Query: 293 FIGPKY-DCMGRLMSINDKRLD 231
           F  PKY DC G+L S+ D +LD
Sbjct: 53  FCVPKYEDCFGQLRSVEDCKLD 74


>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical
           protein F54B3.1b protein.
          Length = 3394

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -1

Query: 452 MDITYALYLDQAEMQKKKSDMVYVARMRRLNHQPFKVSIDVMSDKA 315
           +++TY   LD+A+++K+     Y A   +    P K+  D  SD A
Sbjct: 698 INVTYGTILDEADLKKEARRYRYEANAAKFYMDPTKI-FDKKSDPA 742


>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical
           protein F54B3.1a protein.
          Length = 3396

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -1

Query: 452 MDITYALYLDQAEMQKKKSDMVYVARMRRLNHQPFKVSIDVMSDKA 315
           +++TY   LD+A+++K+     Y A   +    P K+  D  SD A
Sbjct: 698 INVTYGTILDEADLKKEARRYRYEANAAKFYMDPTKI-FDKKSDPA 742


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,386,769
Number of Sequences: 27780
Number of extensions: 245861
Number of successful extensions: 860
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)