Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_C04
         (656 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)                 29   4.4  
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)              28   7.7  

>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
          Length = 115

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 552 GAASQFGEFPWVVAIMNGRNFSYIGVGVLIHPQ 650
           G A++ G++PW   +     F Y G G LI PQ
Sbjct: 14  GTAAKHGDWPWQAQLRTTSGFPYCG-GSLIAPQ 45


>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
          Length = 1019

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 552 GAASQFGEFPWVVAIMNGRNFSYIGVGVLIH 644
           GAA+  G++PW   +     F Y G G LIH
Sbjct: 394 GAAANPGDWPWQAQLRTTTGFPYCG-GSLIH 423


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,807,470
Number of Sequences: 59808
Number of extensions: 213439
Number of successful extensions: 587
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)