BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0005_C02 (632 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 32 0.45 SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24) 31 0.59 SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31) 31 0.59 SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 31 0.59 SB_48061| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 30 1.8 SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4 SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 29 3.1 SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 3.1 SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) 29 3.1 SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 29 4.1 SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) 29 4.1 SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5 SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5 SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5 SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 28 5.5 SB_57111| Best HMM Match : Drf_FH1 (HMM E-Value=3.3) 28 7.2 SB_31197| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6 SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6 SB_51860| Best HMM Match : ShTK (HMM E-Value=1.5e-09) 27 9.6 SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6 SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6 SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6 SB_19791| Best HMM Match : Reprolysin (HMM E-Value=3.1) 27 9.6 SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 27 9.6 >SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) Length = 1258 Score = 31.9 bits (69), Expect = 0.45 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Frame = +2 Query: 431 TRIPEPPAPISGHGNLLSSVAP---PSQLPNFITAVSPTPANL--QNHLPPQDLPATPHP 595 T++P PAPI+ SS P P QLP+ + P+ LP P+TP P Sbjct: 246 TQLPSTPAPINPTPINPSSYQPNSHPPQLPSTQLPSTQLPSTQLPSTQLPSTQFPSTPAP 305 Query: 596 VPVQPI 613 + PI Sbjct: 306 INPTPI 311 Score = 31.5 bits (68), Expect = 0.59 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = +2 Query: 431 TRIPEPPAPISGHGN---LLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVP 601 T+ P P PI+ + + LLS++ P + P A++PTP N P P++ P Sbjct: 169 TQAPINPTPINSNSHQLQLLSTLIPSTTAPINPAAINPTPINPTPINPTPINPSSHQPSC 228 Query: 602 VQP 610 QP Sbjct: 229 YQP 231 Score = 27.9 bits (59), Expect = 7.2 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 16/66 (24%) Frame = +2 Query: 461 SGHGNLLSSVAP----PS-QLPNFITAVSPTPANLQNH--------LPPQDLPATP---H 592 S H N L AP PS QLP+ ++PTP N +H +P P P + Sbjct: 146 STHNNALQHSAPITQLPSTQLPSTQAPINPTPINSNSHQLQLLSTLIPSTTAPINPAAIN 205 Query: 593 PVPVQP 610 P P+ P Sbjct: 206 PTPINP 211 >SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24) Length = 324 Score = 31.5 bits (68), Expect = 0.59 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%) Frame = +2 Query: 509 PNFITAV--SPTP-ANLQNHLPPQDLPATPHPVPVQPILV 619 P +TA +PTP A+L+ PP+D+P P PVP + +V Sbjct: 107 PEEVTAKDQAPTPQASLEEVEPPKDIPPLPPPVPKEKPIV 146 >SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31) Length = 662 Score = 31.5 bits (68), Expect = 0.59 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +2 Query: 539 PANLQNHLPPQDLPATPHPVPVQ 607 P N+Q H+PP +P P+ +P Q Sbjct: 53 PGNIQGHVPPPQMPMAPNQMPPQ 75 >SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) Length = 638 Score = 31.5 bits (68), Expect = 0.59 Identities = 19/67 (28%), Positives = 29/67 (43%) Frame = +2 Query: 416 SSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHP 595 S+ ++ +PPAP+ N +AP L + P P++ LPP + P P Sbjct: 413 STVSNSKEKKPPAPLPKAHN--EKIAPLPSLRASAATLPPLPSDEPPPLPPDEEKPPPPP 470 Query: 596 VPVQPIL 616 P P L Sbjct: 471 APALPPL 477 >SB_48061| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 307 Score = 30.3 bits (65), Expect = 1.4 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = +2 Query: 410 NMSSDKKTRIPE-PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLP 580 ++ + T IP+ PP P H + PP +LP +A + P +LQ PP P Sbjct: 136 SLPTSATTPIPQIPPPPTYLHPSQYPPSPPPWELPRVPSANATLPPHLQYGPPPPTSP 193 >SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) Length = 382 Score = 29.9 bits (64), Expect = 1.8 Identities = 20/61 (32%), Positives = 28/61 (45%) Frame = +2 Query: 428 KTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQ 607 +T+ P+PPAP + + PP+ I PTP + LPP P P P P+ Sbjct: 173 ETKPPKPPAP----STIPTPPTPPAPPSPPIPTAPPTPPMPETPLPPGS-PHIP-PAPLH 226 Query: 608 P 610 P Sbjct: 227 P 227 >SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 476 Score = 29.5 bits (63), Expect = 2.4 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = +2 Query: 446 PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLP-ATPHPVP 601 PP P + + PPSQ P P P + + LPP +P AT P P Sbjct: 307 PPPPAASEPAAFAPAPPPSQAP-------PPPKTIPSTLPPPPVPSATSAPPP 352 Score = 28.3 bits (60), Expect = 5.5 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +2 Query: 491 APPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPV 604 APP + A +P P Q PP+ +P+T P PV Sbjct: 306 APPPPAASEPAAFAPAPPPSQAPPPPKTIPSTLPPPPV 343 >SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) Length = 774 Score = 29.1 bits (62), Expect = 3.1 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = +2 Query: 500 SQLPNFITAVSPTPANLQN---HLPPQDLPATPHPVPVQPIL 616 +Q P I+ V+PTP N+ N P D AT P PI+ Sbjct: 71 TQTPTSISNVTPTPTNINNISSTTTPLDSSATTTTTPTLPIV 112 >SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 158 Score = 29.1 bits (62), Expect = 3.1 Identities = 18/65 (27%), Positives = 23/65 (35%) Frame = +2 Query: 416 SSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHP 595 ++ + T P P P + S P S P T +PTP P Q P P Sbjct: 18 ATPQTTPTPTKPTPTTHTPTKPSPTTPTSTAP---TQTTPTPTTPSPTAPTQTTPTPATP 74 Query: 596 VPVQP 610 P P Sbjct: 75 TPTTP 79 Score = 27.5 bits (58), Expect = 9.6 Identities = 16/60 (26%), Positives = 22/60 (36%) Frame = +2 Query: 431 TRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQP 610 T P+ P P + + P+ TA +PT H P + P TP P P Sbjct: 78 TPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTP 137 >SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 737 Score = 29.1 bits (62), Expect = 3.1 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Frame = +2 Query: 446 PPAPISGHGN---LLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPAT 586 PP P+ LLS PP LP F +A++ L ++LPPQ LP++ Sbjct: 501 PPQPLPSSSTITFLLSHYLPPQPLP-FSSAITFL---LNHYLPPQPLPSS 546 >SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062) Length = 830 Score = 29.1 bits (62), Expect = 3.1 Identities = 19/63 (30%), Positives = 30/63 (47%) Frame = +2 Query: 428 KTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQ 607 +T IP + I+ H + + AP PN ++P+P N+ PP P+ PH P+ Sbjct: 280 RTEIPPLSSLIATHNHSPPNTAPSP--PN----IAPSPPNIAPS-PPNTAPSPPHSDPIA 332 Query: 608 PIL 616 L Sbjct: 333 AAL 335 >SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) Length = 293 Score = 29.1 bits (62), Expect = 3.1 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Frame = +2 Query: 440 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQ-NHLPPQDLPATPHP---VPVQ 607 P P +PI + PP +P+ +V P P PPQ PA P+P P Q Sbjct: 119 PPPYSPIPPQVPYPGAAGPP--MPHPTASVYPPPGGYPPTSYPPQPYPAQPYPQQGYPPQ 176 Query: 608 P 610 P Sbjct: 177 P 177 >SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) Length = 942 Score = 28.7 bits (61), Expect = 4.1 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +2 Query: 482 SSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQP 610 SS APP LP T+ S P + ++ PQ + A P +P Sbjct: 260 SSAAPPQSLPGLQTSPSLQPPSQRSTPSPQSMSALHSGKPKRP 302 >SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) Length = 237 Score = 28.7 bits (61), Expect = 4.1 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = +2 Query: 431 TRIPEPPAPISGHGNLLSSVAPPSQLP-NFITAVSP-TPANLQNHLPPQDLPATPHPVP 601 T P AP + + + P S P ++ A +P TPA+ +PP +TP P P Sbjct: 60 TPAPAQQAPHTTAASQPAPYTPASGQPASYTPAYTPYTPASTVGRMPPTTSQSTPSPAP 118 >SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 469 Score = 28.3 bits (60), Expect = 5.5 Identities = 18/65 (27%), Positives = 26/65 (40%) Frame = +2 Query: 416 SSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHP 595 S+ + T +P P S L++ S P +T S N + H PP TP P Sbjct: 46 STSRPTNALQPLKPPSNTPQQLTTPPHQSNTPRPLTPPSRQSNNPRPHTPPSCQSNTPRP 105 Query: 596 VPVQP 610 + P Sbjct: 106 LTPPP 110 >SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1680 Score = 28.3 bits (60), Expect = 5.5 Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 3/80 (3%) Frame = +2 Query: 386 EVKYKV*FNMSSDKKTRIPEP-PAPISGHGNLLSSVAPPSQLPNFITAVSPTPAN--LQN 556 EV Y + + + P P PAP + P+Q N +PT A + + Sbjct: 704 EVPYPTLSTAAQPTQAQNPAPTPAPTQAQNP--APTPAPTQAQNPAPTPAPTQAQPPVPS 761 Query: 557 HLPPQDLPATPHPVPVQPIL 616 P Q P P P P Q +L Sbjct: 762 PAPTQAQPPAPSPAPTQALL 781 >SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 290 Score = 28.3 bits (60), Expect = 5.5 Identities = 17/57 (29%), Positives = 24/57 (42%) Frame = +2 Query: 440 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQP 610 P PP P + + ++ PP P + + P P N PP + P P P P P Sbjct: 131 PYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPN----PPPPNAPYPPPPYPPPP 183 Score = 27.5 bits (58), Expect = 9.6 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Frame = +2 Query: 440 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQN--HLPPQDLPATPHPVPVQP 610 P PP P + ++ PP P + P P N N + PP + P P+P P P Sbjct: 186 PYPPPPNPPYPPPPNAPNPPPPNPPY-----PPPPNAPNPPYPPPPNAPNPPYPPPPNP 239 >SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) Length = 330 Score = 28.3 bits (60), Expect = 5.5 Identities = 18/55 (32%), Positives = 21/55 (38%) Frame = +2 Query: 416 SSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLP 580 +S T P PP P + G SS P P A P P + LPP P Sbjct: 274 ASQNATPPPPPPPPSNTPGMFASSGFQPPPPPPTDFAPPPPPPEPTSELPPPPPP 328 >SB_57111| Best HMM Match : Drf_FH1 (HMM E-Value=3.3) Length = 451 Score = 27.9 bits (59), Expect = 7.2 Identities = 20/52 (38%), Positives = 25/52 (48%) Frame = +2 Query: 437 IPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPH 592 IP P P+ GN SSV P + P+ V+P A N +P PA PH Sbjct: 72 IPNPGVPL---GNNFSSVMPSTMSPSLPFFVAPLAA---NQMP---YPALPH 114 >SB_31197| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 469 Score = 27.9 bits (59), Expect = 7.2 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = +2 Query: 431 TRIPEPPAPISGHGNLLSSVAPPSQLPNF-ITAVSPTPANLQNHLPPQDLPATPHPVPV 604 T+I PA G + SQLP +T V P QN LP L T HP PV Sbjct: 58 TQITITPAQTKLSGLQQTHTRVESQLPTCTVTTVPVIPPISQNPLPSPTL-VTVHPAPV 115 >SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 145 Score = 27.5 bits (58), Expect = 9.6 Identities = 20/55 (36%), Positives = 23/55 (41%) Frame = +2 Query: 446 PPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQP 610 PP P S ++ PP+ P A P A PP LPA P P P QP Sbjct: 51 PPPPPSPPAAAPAAPPPPAAAP---AAPPPPAAPPAAPPPPPPLPAPP-PPPAQP 101 >SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1554 Score = 27.5 bits (58), Expect = 9.6 Identities = 20/65 (30%), Positives = 24/65 (36%) Frame = +2 Query: 416 SSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHP 595 SS + P P P S G S PP P +T PT + +PP HP Sbjct: 673 SSSAQMLPPMPGPPSSMSGPTTSRHGPP---PTGLTMNPPTSMGMAPMMPPPGPGMGTHP 729 Query: 596 VPVQP 610 V P Sbjct: 730 QQVSP 734 >SB_51860| Best HMM Match : ShTK (HMM E-Value=1.5e-09) Length = 197 Score = 27.5 bits (58), Expect = 9.6 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +2 Query: 488 VAPPSQL--PNFITAVSPTPANLQNHLPPQDLPATPHPVP 601 + PP+++ P + PTPA L PP +P P PVP Sbjct: 111 LVPPTEISGPGPKETLPPTPATL----PPTTVPPAPAPVP 146 >SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1850 Score = 27.5 bits (58), Expect = 9.6 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Frame = +2 Query: 440 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHP--VPVQP 610 P P + + + A P+Q P TA T Q + P PAT +P PV P Sbjct: 1295 PAPAPAAQAYPSAAPATAYPTQAPANPTAAPATAYPAQAPVNPTAAPATAYPAQAPVNP 1353 >SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1554 Score = 27.5 bits (58), Expect = 9.6 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 Query: 527 VSPTPANLQNHLPPQDLPATPHPVPVQPILVQQR 628 +SP A +Q L +P T P P P L+++R Sbjct: 450 ISPIWAAIQKELNAFGIPTTAKPTPALPDLIKER 483 >SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1574 Score = 27.5 bits (58), Expect = 9.6 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -2 Query: 463 RNRCWRFRNPRLFIRTHVELYFIFHFTSLLMRMAT 359 ++ W+ N R + ++L FHFT L+MR T Sbjct: 1178 KDEWWQSENGRENVYLQLDLESEFHFTHLIMRFRT 1212 >SB_19791| Best HMM Match : Reprolysin (HMM E-Value=3.1) Length = 616 Score = 27.5 bits (58), Expect = 9.6 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = +2 Query: 452 APISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQ-DLPATPH 592 +P + HGN + V ++LP+ T ++ + AN P D A PH Sbjct: 322 SPPTNHGNQPTQVMDSNRLPDLTTTIASSEANTPAPDPLHVDTVARPH 369 >SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) Length = 1284 Score = 27.5 bits (58), Expect = 9.6 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Frame = +2 Query: 416 SSDKKTRIPEPPAPISGHGNL---LSSVAPPSQLPNFITAVSPTPANL--QNHLPPQDLP 580 SS + PP P+ G GNL L+ + P L + V P P +H P DLP Sbjct: 231 SSQSGSNDSPPPFPVEGEGNLTTFLAKIQAPRLLLRALDWVLPAPQRTPSSDHSLP-DLP 289 Query: 581 ATPH 592 PH Sbjct: 290 --PH 291 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,583,378 Number of Sequences: 59808 Number of extensions: 405873 Number of successful extensions: 1113 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 951 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1099 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1584657875 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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