Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_C02
(632 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 36 0.018
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 36 0.018
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 34 0.074
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 33 0.22
U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical pr... 31 0.52
Z73976-4|CAA98287.2| 965|Caenorhabditis elegans Hypothetical pr... 31 0.69
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 31 0.69
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 31 0.69
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 31 0.69
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 0.91
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 0.91
AF016673-4|AAB66125.2| 743|Caenorhabditis elegans Hypothetical ... 31 0.91
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z49908-7|CAA90099.1| 294|Caenorhabditis elegans Hypothetical pr... 30 1.2
U00050-3|AAL02480.1| 556|Caenorhabditis elegans Hypothetical pr... 30 1.2
U00050-2|AAL02479.1| 582|Caenorhabditis elegans Hypothetical pr... 30 1.2
U00050-1|AAA50697.1| 583|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical ... 30 1.2
AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical ... 30 1.2
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 30 1.6
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 29 2.8
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 29 2.8
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 29 2.8
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 29 3.7
Z79604-3|CAD36502.1| 817|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z79604-2|CAB01900.1| 780|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 29 3.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.7
AF332205-1|AAK17976.1| 817|Caenorhabditis elegans nuclear recep... 29 3.7
AF332204-1|AAK17975.1| 519|Caenorhabditis elegans nuclear recep... 29 3.7
Z81134-3|CAB03446.1| 991|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF067937-4|AAF99911.2| 352|Caenorhabditis elegans Hypothetical ... 28 4.8
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z47745-3|CAA87666.1| 313|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 28 6.4
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 8.4
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 27 8.4
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 27 8.4
AF106575-13|AAC78162.2| 393|Caenorhabditis elegans Serpentine r... 27 8.4
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 36.3 bits (80), Expect = 0.018
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +2
Query: 419 SDKKTRIPEPPAPISGHGNLLSSVA-----PPSQLPNFITAVSPTPANLQNHLPPQDLPA 583
SD++ P PP P + +SSV PP QL N + P NHLP P
Sbjct: 814 SDEECDPPPPPKPQVSTSSRMSSVPSHPPPPPQQLGNPMVGYPGMPLQSPNHLPLTPSPL 873
Query: 584 TPHPVPVQP 610
+ P P P
Sbjct: 874 SAPPKPFSP 882
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 36.3 bits (80), Expect = 0.018
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +2
Query: 419 SDKKTRIPEPPAPISGHGNLLSSVA-----PPSQLPNFITAVSPTPANLQNHLPPQDLPA 583
SD++ P PP P + +SSV PP QL N + P NHLP P
Sbjct: 814 SDEECDPPPPPKPQVSTSSRMSSVPSHPPPPPQQLGNPMVGYPGMPLQSPNHLPLTPSPL 873
Query: 584 TPHPVPVQP 610
+ P P P
Sbjct: 874 SAPPKPFSP 882
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 34.3 bits (75), Expect = 0.074
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +2
Query: 455 PISG-HGNLLSSVAPPSQLPNFITAVSPT-PANLQN--HLPPQDLPATPHPVPVQP 610
P G +G PP Q+ + + P+ PA+L N LPP + P PHP+P P
Sbjct: 172 PFGGDYGGYKFQQQPPPQINRYGSGPPPSKPADLSNTRSLPPVNNPPPPHPIPQFP 227
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 32.7 bits (71), Expect = 0.22
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +2
Query: 440 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPAN-LQNHLPPQDLPATPHPVPVQPIL 616
P PAP+ + APP +P V P P + PA P P P Q
Sbjct: 277 PPNPAPVVQQASAPVQQAPPKPVPQQTPPVQQAPPKPAVQQAPTRAAPAPPKPAPQQAPP 336
Query: 617 VQQ 625
VQQ
Sbjct: 337 VQQ 339
>U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical
protein C02F12.8 protein.
Length = 687
Score = 31.5 bits (68), Expect = 0.52
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 539 PANLQNHLPPQDLPATPHPVPVQPILVQQ 625
P QN+ PPQ +PA P +PV ++V Q
Sbjct: 175 PVGSQNYNPPQFVPAPPTMMPVGAVMVSQ 203
>Z73976-4|CAA98287.2| 965|Caenorhabditis elegans Hypothetical
protein T07C12.8 protein.
Length = 965
Score = 31.1 bits (67), Expect = 0.69
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +2
Query: 416 SSDKKTRIPEPPAPISGHGNLLSSVAPP-SQLPNFI---TAVSPTPANLQNHLPPQDLPA 583
SS +T + N L AP +P + TA+ P + +N LPP LP+
Sbjct: 451 SSSNQTSTISNEQQFANFVNFLKQTAPVIPYIPTLVRSLTALDPRSSPSENILPPGTLPS 510
Query: 584 TPHPVPVQ 607
P P+ V+
Sbjct: 511 NPAPIDVR 518
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 31.1 bits (67), Expect = 0.69
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 485 SVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQ 625
S A + + A SP+P+ HL P + + PV + P +QQ
Sbjct: 758 STAAAATAERLVNATSPSPSVASQHLVPTETSTSVPPVTIVPPAIQQ 804
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 31.1 bits (67), Expect = 0.69
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 485 SVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQ 625
S A + + A SP+P+ HL P + + PV + P +QQ
Sbjct: 758 STAAAATAERLVNATSPSPSVASQHLVPTETSTSVPPVTIVPPAIQQ 804
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 31.1 bits (67), Expect = 0.69
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 485 SVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILVQQ 625
S A + + A SP+P+ HL P + + PV + P +QQ
Sbjct: 758 STAAAATAERLVNATSPSPSVASQHLVPTETSTSVPPVTIVPPAIQQ 804
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 0.91
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +2
Query: 440 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPI 613
P PP P SG + S P Q PN+ TP N + +PP P P + PI
Sbjct: 574 PPPPPPSSGTRGIAPS-RPLPQAPNY-----GTPENRPHAVPPPPPPPPPQSFGMAPI 625
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 0.91
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +2
Query: 440 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPI 613
P PP P SG + S P Q PN+ TP N + +PP P P + PI
Sbjct: 400 PPPPPPSSGTRGIAPS-RPLPQAPNY-----GTPENRPHAVPPPPPPPPPQSFGMAPI 451
>AF016673-4|AAB66125.2| 743|Caenorhabditis elegans Hypothetical
protein T06D4.3 protein.
Length = 743
Score = 30.7 bits (66), Expect = 0.91
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 413 MSSDKKTRIPEPPAPISGHGNLLSSVAP--PSQLPNFITAVSPTPANLQNHLPPQDLP 580
+SSDKK+ +PP + H L + AP S+ PN T+ P ++ +P D P
Sbjct: 35 ISSDKKSE--QPPPILPSHTEALKAPAPVTTSRPPNLTTSTLPNSSSRPPSIPICDTP 90
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 443 EPPAPISGHGNLLSSVAPPSQLPNFIT-AVSPTPANLQNHLPPQDLPATPHPVPVQP 610
EPP P+ + PP+ +P + A P PA ++ PP P P PV+P
Sbjct: 186 EPPKPVEQ----AAPPPPPAPMPVPVEKAPEPVPAPVEQIAPPPAPVQDPAPAPVEP 238
>Z49908-7|CAA90099.1| 294|Caenorhabditis elegans Hypothetical
protein C07E3.8 protein.
Length = 294
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 480 YLV*HHRRSFPTSLLLFRLLQRIYRITCLHKICL 581
Y V H R+ FPT + ++L +I I + K+C+
Sbjct: 223 YKVKHFRKCFPTKKMSIKILSQIENIQDIRKLCI 256
>U00050-3|AAL02480.1| 556|Caenorhabditis elegans Hypothetical
protein F09F7.5c protein.
Length = 556
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 425 KKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPV 604
+K + P P AP LSS P Q P FI A S P ++ + PP A P
Sbjct: 332 RKKKGPAPKAPSLPPD--LSS--PTFQAPGFIPAFSARPVSMPPNRPPPSYEAPSFDAPE 387
Query: 605 QP--ILVQQRA 631
P +L+ RA
Sbjct: 388 APGTVLINGRA 398
>U00050-2|AAL02479.1| 582|Caenorhabditis elegans Hypothetical
protein F09F7.5b protein.
Length = 582
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 425 KKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPV 604
+K + P P AP LSS P Q P FI A S P ++ + PP A P
Sbjct: 331 RKKKGPAPKAPSLPPD--LSS--PTFQAPGFIPAFSARPVSMPPNRPPPSYEAPSFDAPE 386
Query: 605 QP--ILVQQRA 631
P +L+ RA
Sbjct: 387 APGTVLINGRA 397
>U00050-1|AAA50697.1| 583|Caenorhabditis elegans Hypothetical
protein F09F7.5a protein.
Length = 583
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 425 KKTRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPV 604
+K + P P AP LSS P Q P FI A S P ++ + PP A P
Sbjct: 332 RKKKGPAPKAPSLPPD--LSS--PTFQAPGFIPAFSARPVSMPPNRPPPSYEAPSFDAPE 387
Query: 605 QP--ILVQQRA 631
P +L+ RA
Sbjct: 388 APGTVLINGRA 398
>AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical
protein D1007.13a protein.
Length = 142
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 416 SSDKKTRIPEPPAPISG-HGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLP 580
+S T PPA S +G+ + S PPS F + PT ++ + PP+DLP
Sbjct: 19 ASTSSTAYSPPPATSSTTYGSSIPSTYPPS---TFAPSAYPTSSSWGSTHPPEDLP 71
>AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical
protein D1007.13b protein.
Length = 247
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 416 SSDKKTRIPEPPAPISG-HGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLP 580
+S T PPA S +G+ + S PPS F + PT ++ + PP+DLP
Sbjct: 124 ASTSSTAYSPPPATSSTTYGSSIPSTYPPS---TFAPSAYPTSSSWGSTHPPEDLP 176
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +2
Query: 440 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPILV 619
P P P ++ + P Q ++ V+P + P Q PA HP P+QP V
Sbjct: 352 PVQPQPYVAPAHITQEIQPAPQ--PYVAPVAPVAQEIHTIQPIQ--PAPIHPAPLQPAHV 407
Query: 620 QQ 625
Q
Sbjct: 408 VQ 409
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +2
Query: 431 TRIPEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQ--NHLPPQDLPAT 586
T EP P+S N S PN+ TA S PA+ +H PP PAT
Sbjct: 60 TTSQEPVKPVSQIPNGAPSYQYNHAAPNYPTAASAFPAHSAGFSHQPPSFSPAT 113
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +2
Query: 449 PAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQN-HLPPQDLPATPHPVPVQPILVQ 622
PAP S +++ PP LP + P + LPP + P PVQPI Q
Sbjct: 336 PAPTSQPVQVMT---PPPTLPPVQVPIQTLPPQTRPPQLPPVQITQPPIQTPVQPIFFQ 391
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +2
Query: 449 PAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQN-HLPPQDLPATPHPVPVQPILVQ 622
PAP S +++ PP LP + P + LPP + P PVQPI Q
Sbjct: 433 PAPTSQPVQVMT---PPPTLPPVQVPIQTLPPQTRPPQLPPVQITQPPIQTPVQPIFFQ 488
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 438 FLNLQHLFLVMATCYLV*---HHRRSFPTSLLLFRLLQRIYRITCLHKICLLHHTQYPFN 608
FL+L F+ +A +L+ HH P LL F L ++R T + C+ + FN
Sbjct: 188 FLSLFLFFVSIAMTFLISRFQHHLTWQPAVLLYFDCLLAVFRSTYILFRCISSSRVFSFN 247
Query: 609 P 611
P
Sbjct: 248 P 248
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 438 FLNLQHLFLVMATCYLV*---HHRRSFPTSLLLFRLLQRIYRITCLHKICLLHHTQYPFN 608
FL+L F+ +A +L+ HH P LL F L ++R T + C+ + FN
Sbjct: 188 FLSLFLFFVSIAMTFLISRFQHHLTWQPAVLLYFDCLLAVFRSTYILFRCISSSRVFSFN 247
Query: 609 P 611
P
Sbjct: 248 P 248
>Z79604-3|CAD36502.1| 817|Caenorhabditis elegans Hypothetical
protein ZK662.3b protein.
Length = 817
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 458 ISGHGNLLSSVAP--PSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQP 610
+S ++ +V P P P FI PTP N+ P +TP P P+ P
Sbjct: 389 VSNMAPVMPTVNPLDPLLAPAFIAPPMPTPINVPITTPIAGALSTPLPPPIVP 441
>Z79604-2|CAB01900.1| 780|Caenorhabditis elegans Hypothetical
protein ZK662.3a protein.
Length = 780
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 458 ISGHGNLLSSVAP--PSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQP 610
+S ++ +V P P P FI PTP N+ P +TP P P+ P
Sbjct: 352 VSNMAPVMPTVNPLDPLLAPAFIAPPMPTPINVPITTPIAGALSTPLPPPIVP 404
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 440 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTP 541
P+P AP+ G+L+ + P +LPN + AV P
Sbjct: 569 PDPSAPVVPSGDLIIA-TPDPELPNIVAAVPFIP 601
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 440 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTP 541
P+P AP+ G+L+ + P +LPN + AV P
Sbjct: 591 PDPSAPVVPSGHLIVA-TPDPELPNIVAAVPFIP 623
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Frame = +2
Query: 437 IPEPPAPISGHGNLLSSVA--PPSQLPNF-ITAVSPTPANLQNHLPPQDLPATPHPVPVQ 607
+P P P++ + V PP+ P + A +P PA H P P P P
Sbjct: 77 VPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPP 136
Query: 608 P 610
P
Sbjct: 137 P 137
Score = 27.9 bits (59), Expect = 6.4
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +2
Query: 446 PPAPISGHGNLLSSVAPP--SQLPNFITAVSPTPANLQNHLPPQDLPATPHPVP 601
PPAP H + + APP S N + +P PA H P P P P P
Sbjct: 68 PPAPYPQHA--VPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAP-PPAPYP 118
>AF332205-1|AAK17976.1| 817|Caenorhabditis elegans nuclear receptor
NHR-48 protein.
Length = 817
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 458 ISGHGNLLSSVAP--PSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQP 610
+S ++ +V P P P FI PTP N+ P +TP P P+ P
Sbjct: 389 VSNMAPVMPTVNPLDPLLAPAFIAPPMPTPINVPITTPIAGALSTPLPPPIVP 441
>AF332204-1|AAK17975.1| 519|Caenorhabditis elegans nuclear receptor
NHR-48 protein.
Length = 519
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 458 ISGHGNLLSSVAP--PSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQP 610
+S ++ +V P P P FI PTP N+ P +TP P P+ P
Sbjct: 91 VSNMAPVMPTVNPLDPLLAPAFIAPPMPTPINVPITTPIAGALSTPLPPPIVP 143
>Z81134-3|CAB03446.1| 991|Caenorhabditis elegans Hypothetical
protein T28D6.4 protein.
Length = 991
Score = 28.3 bits (60), Expect = 4.8
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = +2
Query: 374 KK*SEVKYKV*FNMSSDKKTRIPEPPAPISGHGNLLSSVAPPSQLPNF--ITAVSPTPAN 547
+K SEV V + S + + EPP I G L P LP +T + T +
Sbjct: 53 RKLSEVSECVASHFCSHDEPQSSEPPTVIRSLGEQLMRRFPNLVLPRLTTVTLLEDTVSA 112
Query: 548 LQN--HLPPQDLPATPHPV 598
L + LP + +P+T PV
Sbjct: 113 LDHFLRLPLETMPSTSKPV 131
>AF067937-4|AAF99911.2| 352|Caenorhabditis elegans Hypothetical
protein F22F7.6 protein.
Length = 352
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/39 (25%), Positives = 23/39 (58%)
Frame = -2
Query: 478 QVAMTRNRCWRFRNPRLFIRTHVELYFIFHFTSLLMRMA 362
Q+ + CW+FR + ++R+H+ F + ++L+ +A
Sbjct: 102 QIPASDRTCWKFRADQSYLRSHLSGPFQLYPSNLMRNLA 140
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 509 PNFITAVSPTPANLQN-HLPPQDLPATPHPVPVQPILVQQR 628
P + P P L + LP +D TP P PV P VQ+R
Sbjct: 1579 PQVSESTCPIPEPLADLKLPVEDDEKTPEPEPVVPGQVQER 1619
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 509 PNFITAVSPTPANLQN-HLPPQDLPATPHPVPVQPILVQQR 628
P + P P L + LP +D TP P PV P VQ+R
Sbjct: 1579 PQVSESTCPIPEPLADLKLPVEDDEKTPEPEPVVPGQVQER 1619
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 509 PNFITAVSPTPANLQN-HLPPQDLPATPHPVPVQPILVQQR 628
P + P P L + LP +D TP P PV P VQ+R
Sbjct: 1579 PQVSESTCPIPEPLADLKLPVEDDEKTPEPEPVVPGQVQER 1619
>Z47745-3|CAA87666.1| 313|Caenorhabditis elegans Hypothetical
protein T19H5.4 protein.
Length = 313
Score = 27.9 bits (59), Expect = 6.4
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 458 ISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQPIL 616
IS H +LLS +APP+ P F N PP++ A P + V P+L
Sbjct: 67 ISMHLSLLSQLAPPNFSPFFFF--------FSNRSPPKERRANPKALCVLPLL 111
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 27.9 bits (59), Expect = 6.4
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = +2
Query: 440 PEPPAPISGHGNLLSSVAPPSQLPNFITAVSPTPANLQNHLPPQDLPATPHPVPVQ 607
PE PAP + AP Q P P PA L P+ P P PVQ
Sbjct: 69 PEAPAP--------APTAPDVQQPGPAPVPVPEPAQLAPQSAPEPTPDAPAAAPVQ 116
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 560 LPPQDLPATPHPVPVQPI 613
LPP P P P PVQPI
Sbjct: 517 LPPPPPPPKPKPAPVQPI 534
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 440 PEPPAPISGHGNLLSSVAPPSQLPNF--ITAVSPTPANLQNHLPPQDLPATPHPVPV 604
P PP P+ G + ++ PP +P ++ +PTP P P P+P+
Sbjct: 503 PPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPL 559
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 560 LPPQDLPATPHPVPVQPI 613
LPP P P P PVQPI
Sbjct: 517 LPPPPPPPKPKPAPVQPI 534
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +2
Query: 497 PSQLPNFITAVSPTPANLQNHLP-PQD--LPATPHPVP 601
P+ +P F+ ++ P P LP P D P TP P+P
Sbjct: 489 PAPVPKFLNSILPPPPAPPQFLPNPTDSFRPPTPPPLP 526
>AF106575-13|AAC78162.2| 393|Caenorhabditis elegans Serpentine
receptor, class w protein96 protein.
Length = 393
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 228 WRNHVYHICHYFYQKQNRISHRLISFVLKTSY 323
W VYHIC+ N ISH +I +++ Y
Sbjct: 334 WGTFVYHICNAIL-TVNIISHCIICYIMSGQY 364
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,763,121
Number of Sequences: 27780
Number of extensions: 327002
Number of successful extensions: 1083
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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