Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_C01
         (628 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              25   0.60 
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   3.2  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             23   3.2  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   5.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.6  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   9.8  

>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 483 DRSILAIXXXXXXXDSFEYWIFLAQHQENIRDYPC 587
           DRS +         DS E  I L   +EN R+Y C
Sbjct: 36  DRSNMTFHELKKLRDSSEARIKLINEEENFRNYGC 70


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 577 TTPVDDXESEHREGFTA 627
           T P+DD  S+  EGF A
Sbjct: 150 TNPLDDSISQANEGFCA 166


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 577 TTPVDDXESEHREGFTA 627
           T P+DD  S+  EGF A
Sbjct: 145 TNPLDDSISQANEGFCA 161


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -3

Query: 470 YCSARRRAELVKAVRACGDSNKRLYFCGSSVSSSPP 363
           YC A++  + ++AV    D++    F     ++ PP
Sbjct: 216 YCYAQKHVKSIRAVTKLPDTSMAKSFVRKVHATKPP 251


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 421 QARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKI 528
           ++ T   N AL LAE Y   G  +S    KR+  K+
Sbjct: 879 ESSTDSRNPALALAEPYNQRGTVVSPPPTKRRTMKV 914


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 421  QARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKI 528
            ++ T   N AL LAE Y   G  +S    KR+  K+
Sbjct: 917  ESSTDSRNPALALAEPYNQRGTVVSPPPTKRRTMKV 952


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 542 DLSGTASRKHSGLPLLM 592
           D++G   +KH   PLLM
Sbjct: 131 DIAGLRKKKHKVNPLLM 147


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.132    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,975
Number of Sequences: 438
Number of extensions: 3048
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)