Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_C01
(628 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 56 1e-08
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 50 2e-06
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 48 7e-06
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 46 2e-05
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 45 5e-05
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 38 0.005
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 37 0.010
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 33 0.12
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 32 0.27
At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger) fa... 30 1.4
At2g22650.1 68415.m02684 FAD-dependent oxidoreductase family pro... 30 1.4
At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR... 29 1.9
At4g18010.2 68417.m02680 inositol polyphosphate 5-phosphatase II... 29 2.5
At1g23270.1 68414.m02911 hypothetical protein 29 2.5
At5g35840.1 68418.m04306 phytochrome C (PHYC) identical to SP|P1... 28 4.4
At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger) fa... 28 4.4
At3g26920.1 68416.m03368 F-box family protein contains F-box dom... 28 4.4
At2g18650.1 68415.m02173 zinc finger (C3HC4-type RING finger) fa... 28 4.4
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 28 4.4
At4g37110.1 68417.m05256 expressed protein 28 5.8
At4g15075.1 68417.m02316 hypothetical protein 28 5.8
At1g13540.1 68414.m01587 expressed protein 28 5.8
At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 27 7.7
At3g27220.1 68416.m03403 kelch repeat-containing protein contain... 27 7.7
At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger) fa... 27 7.7
At5g42870.1 68418.m05225 lipin family protein contains Pfam prof... 23 8.1
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/114 (27%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +1
Query: 178 TDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVF 354
TD++ +L THL A ++A++Y++ N A + A T ++++ P ++
Sbjct: 21 TDIDSSLF--THLFCTFADLEAESYEITIATWN------QAPFHAFTETVQQRNPHVKTL 72
Query: 355 LTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRK 516
L++GG + +D + + +P +R +F S + +A YGF G+DL W+ P+ +
Sbjct: 73 LSIGGGNADKDA--FASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYPRNE 124
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = +1
Query: 178 TDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVF 354
TD++ +L THL A + + T ++ + N + T ++R+ P ++
Sbjct: 42 TDIDSSLF--THLFCAFADLNSQTNQVTVSSAN------QPKFSTFTQTVQRRNPSVKTL 93
Query: 355 LTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 507
L++GG D Y + +P +R +F +S++ +A YGF G+DL W+ P
Sbjct: 94 LSIGGG--IADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYP 142
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 47.6 bits (108), Expect = 7e-06
Identities = 29/101 (28%), Positives = 52/101 (51%)
Frame = +1
Query: 208 THLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTED 387
THL A + T +V + ++ +N+ I +K++ P ++ L++GG + D
Sbjct: 39 THLFCAFADLDPQTNSVVVSGAH---EQEFSNFTKI--VKKKNPHVQTLLSIGGRN--AD 91
Query: 388 PQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPK 510
+ + +P +R +F SA+ A Y FDG+DL W+ PK
Sbjct: 92 KSAFASMASNPTSRKSFIWSAISSARYYRFDGLDLVWKYPK 132
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +1
Query: 199 SFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVFLTVGGDD 375
S THL A I TY+++ + N + T ++R+ P ++ L++GGD
Sbjct: 45 SLFTHLFCAFADINTLTYQVIVSSRN------KPKFSTFTQTVRRRNPTVKTLLSIGGDF 98
Query: 376 DTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 507
+ + +P +R F +S++ LA GF G+DL+W+ P
Sbjct: 99 TYNFA--FASMASNPTSRKLFISSSIKLARSCGFHGLDLNWKYP 140
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 44.8 bits (101), Expect = 5e-05
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Frame = +1
Query: 97 SPSSQSKVLCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNEN 276
SPS++ K ++ E+Q + + P+ F THL A + A+++K+
Sbjct: 9 SPSAEVKASYWFPDG----ETQDPITSAETIPSALF-THLFCAFADLDANSHKVF----- 58
Query: 277 LDIDRAHAN-YRAITN-LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSA 450
+ +AH + T +K + PQ++ L++GG + + + + Q+R F +S
Sbjct: 59 --VSQAHEFIFSTFTETVKIRNPQVKTLLSIGGKNANNSA--FASMASNHQSRKTFIDSW 114
Query: 451 LLLAEQYGFDGIDLSWQLP 507
+ +A GF G+DL+W+ P
Sbjct: 115 IFIARSNGFHGLDLAWEYP 133
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 406 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPK 510
+ S R +F S + +A YGFDG+DL W+ P+
Sbjct: 1 MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPR 35
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 37.1 bits (82), Expect = 0.010
Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Frame = +1
Query: 133 DSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRA 312
D KS E ++ P+ + F THL A + + T+++ N + +
Sbjct: 22 DGKSQSPECLSQGTPSSFIDSTLF-THLFCAFADVDSSTHEVTISAAN------SYQFSS 74
Query: 313 ITN-LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGID 489
T +K + ++ L++GG D D + + + R AF +S++ +A + F G+D
Sbjct: 75 FTETVKEKNTDVQTLLSIGGKD--ADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLD 132
Query: 490 LSWQLP 507
L+W+ P
Sbjct: 133 LAWEYP 138
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1
Query: 322 LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 501
+K + ++ L++GG D D + + + R AF +S++ +A + F G+DL+W+
Sbjct: 71 VKDKNTDVQTLLSIGGKD--ADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWE 128
Query: 502 LP 507
P
Sbjct: 129 YP 130
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 32.3 bits (70), Expect = 0.27
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 406 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 507
++ + +R +F +S++ +A GF G+DL+W+ P
Sbjct: 79 IVSNRTSRESFISSSISIARSLGFYGLDLAWEYP 112
>At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 401
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 95 HHLVAKAKSSATMTARAISEN-LKHVCCLRTWSLLFRSAPICCTNLPASKLT 247
H V K +AR + N + H C+ W + S P+C LPA LT
Sbjct: 200 HCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAEDLT 251
>At2g22650.1 68415.m02684 FAD-dependent oxidoreductase family
protein
Length = 420
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 472 GFDGIDLSWQLPKRKPKKIRSSI 540
GF GI ++W L K PK++R S+
Sbjct: 30 GFAGISVAWHLLKESPKELRLSV 52
>At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1036
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 200 RSAPICCTNLPASKLTHIKWFHSM 271
RS PIC T P+S +H KW H +
Sbjct: 13 RSCPICATPFPSSSSSH-KWTHQV 35
>At4g18010.2 68417.m02680 inositol polyphosphate 5-phosphatase II
(IP5PII) nearly identical to inositol polyphosphate
5-phosphatase II [Arabidopsis thaliana] GI:10444263
isoform contains an AT-acceptor splice site at intron 6
Length = 613
Score = 29.1 bits (62), Expect = 2.5
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 9/140 (6%)
Frame = +1
Query: 151 RESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKR 330
R A P + A S +H++ ++ + AD ++ NE +D A + N
Sbjct: 201 RSHSAPSSPILAQEANSIISHVMVEN--LVADHSLDLATNEFIDAATALPSLEPQRNPNM 258
Query: 331 QFPQLRVFLT---VGGDDDTEDPQKYNLLL-----ESPQARTAFTNSALLLAEQYGFDGI 486
+P+L + VG + N L E+P + F + A L F+ +
Sbjct: 259 DWPELALDSNPQIVGSEGKLRRVFSSNATLGFKLPENPSGASRFASEARQLKRSRSFETL 318
Query: 487 DLSW-QLPKRKPKKIRSSIG 543
+LSW + + KIR+S G
Sbjct: 319 NLSWNDIKEEDGDKIRNSYG 338
>At1g23270.1 68414.m02911 hypothetical protein
Length = 180
Score = 29.1 bits (62), Expect = 2.5
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Frame = -3
Query: 539 ILERIFFGFLFGNCQDRSIPSKPYCSARRRAEL-VKAVRACGDSNKRLYFCGSSVSSSPP 363
+LE++ G D ++P+ P RR L V + S K+L +S++S P
Sbjct: 25 VLEQVAKINCSGFTDDTALPTNPETRLRRLKSLPVSRTDSVSSSPKKLLSHSNSMASHPE 84
Query: 362 TVKNTRN*GNCLFKFVIAR*LACARSMSKFSLSETILYVSAWMPADLYSRWVQNERAGSK 183
K R + + F I +C S + ET ++ + SR E +GSK
Sbjct: 85 --KKYRGNVSSVSSFSIQVGKSCPLDSS---VEETQIFSKTKRNQSVKSRGGLGESSGSK 139
Query: 182 SVGS 171
+GS
Sbjct: 140 RIGS 143
>At5g35840.1 68418.m04306 phytochrome C (PHYC) identical to SP|P14714
Phytochrome C {Arabidopsis thaliana}
Length = 1111
Score = 28.3 bits (60), Expect = 4.4
Identities = 24/89 (26%), Positives = 38/89 (42%)
Frame = -3
Query: 440 VKAVRACGDSNKRLYFCGSSVSSSPPTVKNTRN*GNCLFKFVIAR*LACARSMSKFSLSE 261
V ++R GD+ + ++ SS R G C+ VIAR A + M + L
Sbjct: 987 VSSMRLYGDNLRLQQILSETLLSSIRFTPALR--GLCVSFKVIARIEAIGKRMKRVELEF 1044
Query: 260 TILYVSAWMPADLYSRWVQNERAGSKSVG 174
I++ + +P DL Q R G+ G
Sbjct: 1045 RIIHPAPGLPEDLVREMFQPLRKGTSREG 1073
>At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 525
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 175 PTDLEPALSFCTHLLYKSAG 234
PTD P+LSFC +Y S G
Sbjct: 321 PTDPNPSLSFCPSNIYSSTG 340
>At3g26920.1 68416.m03368 F-box family protein contains F-box domain
Pfam:PF00646
Length = 565
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 563 LMLCQKDPILERIFFGFLFGNCQ 495
L+L K P LE + GF FG C+
Sbjct: 336 LLLSNKAPFLESLHLGFRFGECR 358
>At2g18650.1 68415.m02173 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 423
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 164 HVCCLRTWSLLFRSAPICCTNLPASKLTH 250
HV C+ TW L + P+C +NL + +H
Sbjct: 150 HVECIDTWLLSHSTCPLCRSNLLSGFSSH 178
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +1
Query: 214 LLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQ 393
LL+ +A A Y + + L ID A +++ Q P LR + VG +
Sbjct: 547 LLFSTASCSARLYTGTPI-QLLVIDEAAQLKECESSIPMQLPGLRHLILVGDERQLPAMV 605
Query: 394 KYNLLLESPQARTAFTNSALLLAEQY 471
+ + LE+ R+ F ALL ++Y
Sbjct: 606 ESQIALEAGFGRSLFERLALLGHKKY 631
>At4g37110.1 68417.m05256 expressed protein
Length = 417
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 259 PFYMCQLGCRQICTADGCRTKEQAPSP*AAY-VLEIL*YSSCCH 131
P ++C + CR IC CRTK+ AAY + L Y S H
Sbjct: 228 PDWICPV-CRDICNCSFCRTKKGWLPTGAAYRKIHKLGYKSVAH 270
>At4g15075.1 68417.m02316 hypothetical protein
Length = 168
Score = 27.9 bits (59), Expect = 5.8
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 158 LKHVCCLRTWSLLFRSAP 211
L++ CCL+T ++LF+S P
Sbjct: 126 LRNACCLKTATILFKSTP 143
>At1g13540.1 68414.m01587 expressed protein
Length = 381
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 340 QLRVFLTVGGDDDTEDPQKYNLLLESPQARTAF 438
+L V +GGDD T DP + +L+ P + +
Sbjct: 65 KLAVTFNIGGDDSTRDPVVFIPVLDKPLSSNCY 97
>At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 396
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 164 HVCCLRTWSLLFRSAPICCTNLPAS 238
HV C+ W L S P+C LP+S
Sbjct: 282 HVRCIVPWLELHSSCPVCRFELPSS 306
>At3g27220.1 68416.m03403 kelch repeat-containing protein contains
Pfam PF01344: Kelch motif (4 repeats); contains Prosite
PS00334: Myb DNA-binding domain repeat signature 2;
similar to Male enhanced Antigen-1 (peas) (GI:20513270)
[Mus musculus]
Length = 426
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +1
Query: 439 TNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWH 555
T +L+ E + F L+W + R P ++++++ FW+
Sbjct: 355 TKRLVLVGEIFRFQLDTLTWSVIGRLPYRVKTAMAGFWN 393
>At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 214
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 164 HVCCLRTWSLLFRSAPIC 217
H+CCL W L S P+C
Sbjct: 162 HLCCLDAWLKLNGSCPVC 179
>At5g42870.1 68418.m05225 lipin family protein contains Pfam
profile: PF04571 lipin, N-terminal conserved region
Length = 930
Score = 23.0 bits (47), Expect(2) = 8.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 196 LSFCTHLLYKSAGIQADTYKMVSLNENLDIDR 291
LS C HLL S G+ A+ +E LD+++
Sbjct: 542 LSLCKHLL--SEGMGAEAASQAFNSEKLDMEK 571
Score = 22.6 bits (46), Expect(2) = 8.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 91 PASPSSQSKVLCYYDSKSYIRESQARMLPTDLE 189
P+ P SQS C+ SK +RE ++ D E
Sbjct: 486 PSQPLSQSFDPCFNTSKLDLREDESSSGGLDAE 518
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.132 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,472,307
Number of Sequences: 28952
Number of extensions: 243187
Number of successful extensions: 764
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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