Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_B22
(387 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58050.1 68418.m07265 glycerophosphoryl diester phosphodieste... 30 0.47
At5g20940.1 68418.m02488 glycosyl hydrolase family 3 protein bet... 30 0.47
At5g55480.1 68418.m06910 glycerophosphoryl diester phosphodieste... 29 1.4
At1g43780.1 68414.m05043 serine carboxypeptidase S10 family prot... 28 1.9
At1g66970.1 68414.m07615 glycerophosphoryl diester phosphodieste... 28 2.5
At4g26690.1 68417.m03846 glycerophosphoryl diester phosphodieste... 27 3.3
At1g03190.2 68414.m00297 DNA repair protein / transcription fact... 27 3.3
At1g03190.1 68414.m00296 DNA repair protein / transcription fact... 27 3.3
At3g47000.1 68416.m05104 glycosyl hydrolase family 3 protein bet... 27 4.4
At3g47040.1 68416.m05108 glycosyl hydrolase family 3 protein bet... 27 5.8
At3g21560.1 68416.m02719 UDP-glucosyltransferase, putative simil... 27 5.8
At5g58170.1 68418.m07281 glycerophosphoryl diester phosphodieste... 26 7.6
At5g52280.1 68418.m06488 protein transport protein-related low s... 26 7.6
At3g17180.1 68416.m02191 serine carboxypeptidase S10 family prot... 26 7.6
>At5g58050.1 68418.m07265 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family;
similar to Glycerophosphoryl diester phosphodiesterase
precursor (Glycerophosphodiester phosphodiesterase)
(Surface-exposed lipoprotein D) (Protein D)
(ImmunoglobulinD-binding protein) (IGD-binding protein)
(SP:Q06282) {Haemophilus influenzae}
Length = 753
Score = 30.3 bits (65), Expect = 0.47
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +2
Query: 35 VKVFRILYFAKDYDYF----IKTACWLRER-INGGMFVYALTAAVFHRSDCVGITLPAPY 199
V V R Y A +DYF I+ A ++ R ++G + + TA + RS C + PY
Sbjct: 608 VSVLRNEYIAIAFDYFSDPTIELATFIAGRGVDGVITEFPATATRYLRSPCSDLNKDQPY 667
Query: 200 EIYP 211
I P
Sbjct: 668 AILP 671
>At5g20940.1 68418.m02488 glycosyl hydrolase family 3 protein
beta-glucosidase, common nasturtium, PIR:T10521
Length = 626
Score = 30.3 bits (65), Expect = 0.47
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 172 AVRPVEDCSSESIYEHAPVNAFP*PASSFDEVVIVLGEVQYAENF 38
AV+ D ++ IY P F A FD ++ +GE YAE F
Sbjct: 476 AVKKTVDPKTQVIYNQNPDTNFV-KAGDFDYAIVAVGEKPYAEGF 519
>At5g55480.1 68418.m06910 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family;
similar to Glycerophosphoryl diester phosphodiesterase
precursor (Glycerophosphodiester phosphodiesterase)
(Surface-exposed lipoprotein D) (Protein D)
(ImmunoglobulinD-binding protein) (IGD-binding protein)
(SP:Q06282) {Haemophilus influenzae}
Length = 766
Score = 28.7 bits (61), Expect = 1.4
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +2
Query: 20 QMEQAVKVFRILYFAKDYDYFIKTACWLRER-----INGGMFVYALTAAVFHRSDCVGIT 184
Q+ V+VFR + ++ +D+F + ING + + LTAA + R+ C+
Sbjct: 617 QLPVYVEVFRNEFVSQPWDFFADATVEINSHVTGAGINGTITEFPLTAARYKRNSCLTRK 676
Query: 185 LPAPYEI 205
PY I
Sbjct: 677 DVPPYMI 683
>At1g43780.1 68414.m05043 serine carboxypeptidase S10 family protein
similar to serine carboxylase II-3 GB:CAA55478 GI:474392
from [Hordeum vulgare]
Length = 479
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 164 SDCVGITLPAPYEIYPYFFVDSHVINKAFMMKMTKAAT-DPVLMNYYGI 307
SD +G+T+ + Y F DSH I+K + +A T +NYY I
Sbjct: 242 SDELGLTIMNQCDFEDYTFTDSHNISKLCEAAVNQAGTIITQYVNYYDI 290
>At1g66970.1 68414.m07615 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family
Length = 763
Score = 27.9 bits (59), Expect = 2.5
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +2
Query: 20 QMEQAVKVFRILYFAKDYDYFIKTACWLRERI-----NGGMFVYALTAAVFHRSDCVGIT 184
Q+ V++FR + ++ YD+F + I NG + + TAA + R+ C+G
Sbjct: 617 QLPVYVELFRNEFVSQAYDFFSDATVEINAYIYGAGINGTITEFPFTAARYKRNRCLGRE 676
Query: 185 LPAPY 199
PY
Sbjct: 677 EVPPY 681
>At4g26690.1 68417.m03846 glycerophosphoryl diester
phosphodiesterase family protein weak similarity to
glycerophosphodiester phosphodiesterase [Borrelia
hermsii] GI:1399038; contains Pfam profile PF03009:
Glycerophosphoryl diester phosphodiesterase family
Length = 759
Score = 27.5 bits (58), Expect = 3.3
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +2
Query: 20 QMEQAVKVFRILYFAKDYDYFIKTACWLRERI-----NGGMFVYALTAAVFHRSDCVGIT 184
Q+ V++F+ + ++ YD+F + I NG + + TAA + R+ C+G
Sbjct: 610 QLPVYVELFQNEFLSQPYDFFADATVEINSYITGAGINGTITEFPFTAARYKRNLCLGRK 669
Query: 185 LPAPY 199
PY
Sbjct: 670 ETIPY 674
>At1g03190.2 68414.m00297 DNA repair protein / transcription factor
protein (UVH6) identical to DNA repair/transcription
factor protein (UVH6) gi:22651569 gb:AY090788
Length = 758
Score = 27.5 bits (58), Expect = 3.3
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 152 VFHRSDCVGITLP--APYEIYPYFFVDSHVINKAFMMKMTKAATDPVLM 292
VF R V IT +P ++YP + V++++F M MT+ P+++
Sbjct: 447 VFDRFQSVVITSGTLSPIDLYPRLLNFTPVVSRSFKMSMTRDCICPMVL 495
>At1g03190.1 68414.m00296 DNA repair protein / transcription factor
protein (UVH6) identical to DNA repair/transcription
factor protein (UVH6) gi:22651569 gb:AY090788
Length = 758
Score = 27.5 bits (58), Expect = 3.3
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 152 VFHRSDCVGITLP--APYEIYPYFFVDSHVINKAFMMKMTKAATDPVLM 292
VF R V IT +P ++YP + V++++F M MT+ P+++
Sbjct: 447 VFDRFQSVVITSGTLSPIDLYPRLLNFTPVVSRSFKMSMTRDCICPMVL 495
>At3g47000.1 68416.m05104 glycosyl hydrolase family 3 protein
beta-D-glucan exohydrolase, Nicotiana tabacum,
TREMBL:AB017502_1
Length = 608
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3
Query: 175 DAVRPVEDCSSESIYEHAPVNAFP*PASSFDEVVIVLGEVQYAE 44
DA++ +E IYE P + F ++ +GE YAE
Sbjct: 453 DAIKEAVGDETEVIYEKTPSKETLASSEGFSYAIVAVGEPPYAE 496
>At3g47040.1 68416.m05108 glycosyl hydrolase family 3 protein
beta-D-glucan exohydrolase, Nicotiana tabacum,
TREMBL:AB017502_1
Length = 636
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -3
Query: 175 DAVRPVEDCSSESIYEHAPVNAFP*PASSFDEVVIVLGEVQYAE 44
DA++ +E IYE P F ++ +GE YAE
Sbjct: 478 DAIKEAVGDKTEVIYEKTPSEETLASLQRFSYAIVAVGETPYAE 521
>At3g21560.1 68416.m02719 UDP-glucosyltransferase, putative similar
to UDP-glucose:sinapate glucosyltransferase GI:9794913
from [Brassica napus]
Length = 496
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 254 MKMTKAATDPVLMNYYGIQVTDKSMVVIDWRKGVRRSLSEDDK 382
M+ + V +G QVTD ++ W+ GVR S E ++
Sbjct: 374 MEAVSSGVPTVCFPQWGDQVTDAVYMIDVWKTGVRLSRGEAEE 416
>At5g58170.1 68418.m07281 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family;
similar to Glycerophosphoryl diester phosphodiesterase
precursor (Glycerophosphodiester phosphodiesterase)
(Surface-exposed lipoprotein D) (Protein D)
(ImmunoglobulinD-binding protein) (IGD-binding protein)
(SP:Q06282) {Haemophilus influenzae}
Length = 750
Score = 26.2 bits (55), Expect = 7.6
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +2
Query: 35 VKVFRILYFAKDYDYF----IKTACWLR-ERINGGMFVYALTAAVFHRSDCVGITLPAPY 199
V V R Y + +DYF I+ A ++ ++G + + TA + +S C + PY
Sbjct: 608 VSVLRNEYISVAFDYFSDPTIELATFISGSGVDGVITEFPATATRYLKSPCSDLNKEQPY 667
Query: 200 EIYP 211
I P
Sbjct: 668 AILP 671
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 26.2 bits (55), Expect = 7.6
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = -3
Query: 280 VGGSFSHLHHEGFVDDMGVYKEVRVNLV---RSG*SNTDAVRPVEDCSSESIYE--HAPV 116
+GGSF + G++DD R N V R+G ++ S ES E ++P
Sbjct: 190 LGGSFDSIGESGWIDDGNARLPQRHNSVPATRNGHRRSNTDWSASSTSDESYIESRNSPE 249
Query: 115 NAFP*PASSFDE 80
N+F SS E
Sbjct: 250 NSFQRGFSSVTE 261
>At3g17180.1 68416.m02191 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase II SP:P08819
[Triticum aestivum] (Carlsberg Res. Commun.
52:297-311(1987))
Length = 478
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 293 NYYGIQVTDKSMVVIDWRKGVR 358
+Y G V DKS V DW K VR
Sbjct: 301 SYLGFGVNDKSPAVKDWFKRVR 322
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,024,636
Number of Sequences: 28952
Number of extensions: 145207
Number of successful extensions: 364
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 547638520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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