Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_B21
(626 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 119 2e-27
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 118 3e-27
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07) 56 2e-08
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032) 55 5e-08
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 48 8e-06
SB_14141| Best HMM Match : HH_signal (HMM E-Value=0) 46 2e-05
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 39 0.003
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) 38 0.005
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 38 0.005
SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_3684| Best HMM Match : fn3 (HMM E-Value=8e-11) 30 1.3
SB_56058| Best HMM Match : Phasin (HMM E-Value=2.7) 30 1.3
SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_4460| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_50341| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_43353| Best HMM Match : 7tm_1 (HMM E-Value=2.7e-07) 27 9.4
SB_10433| Best HMM Match : Keratin_B2 (HMM E-Value=4.4) 27 9.4
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 119 bits (287), Expect = 2e-27
Identities = 60/131 (45%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Frame = +3
Query: 165 RTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDK-RNNL 341
R A A+ NAG + G++IWRI+ F+ +D+G FY GDSYIIL T + + L
Sbjct: 460 REAAATEIAWKNAGTREGLQIWRIEKFKVKVWSREDYGSFYDGDSYIILNTYKESGEDEL 519
Query: 342 SWDIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYL 521
+D+H+WIG +++QDE G AA TV LD +QHRE G ES F YF S L L
Sbjct: 520 KYDVHFWIGKDSTQDEYGTAAYKTVELDIHLNDKPIQHREVQGFESKLFKSYFKS-LTIL 578
Query: 522 DGGNPSGFNHV 554
GG SGF HV
Sbjct: 579 KGGVDSGFRHV 589
Score = 68.9 bits (161), Expect = 3e-12
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 AVQSKDFGKFYKGDSYIILKTTSD-KRNNLSWDIHYWIGSETSQDEAGAAAILTVGLD 425
+V D+GKFY GDSYIIL T D + + L +D+H+WIG +++QDE G AA TV LD
Sbjct: 879 SVLRDDYGKFYDGDSYIILNTYKDPEEDELKYDVHFWIGKDSTQDEYGTAAYKTVELD 936
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 118 bits (285), Expect = 3e-27
Identities = 60/141 (42%), Positives = 85/141 (60%), Gaps = 2/141 (1%)
Frame = +3
Query: 138 ITSLSDKDARTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKT 317
++ ++ + ++ A A+ NAG + G++IWRI F+ + +G+FY GDSYIIL T
Sbjct: 496 LSEVTHEVKKSAAEGEVAWKNAGEKVGLQIWRINKFKVEEWPKEKYGQFYAGDSYIILWT 555
Query: 318 TSDKRNN--LSWDIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFL 491
+K + L +D+H+WIG ++QDE G AA TV LD VQHRE M HES+ F
Sbjct: 556 YEEKEDTEKLCYDLHFWIGRGSTQDEYGTAAYKTVELDTYLNDVPVQHREIMNHESDMFK 615
Query: 492 QYFTSALQYLDGGNPSGFNHV 554
YF S + YL GG +GFN V
Sbjct: 616 TYFKS-ITYLKGGAETGFNQV 635
>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
Length = 546
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +3
Query: 204 GRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQ 383
GR V +R+ + V + G F+ GDSY+++ T +R I++W G+++
Sbjct: 155 GRSKEVGFYRVTDGGKVQCNTAAKGIFFSGDSYLVVYTYRTQRGQKKSIIYFWKGNDSRV 214
Query: 384 DEAGAAAILTVGLD-DKFGGAAVQ 452
E GAAA LTV LD + FGG AVQ
Sbjct: 215 FEKGAAAKLTVDLDNNNFGGDAVQ 238
>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
Length = 675
Score = 54.8 bits (126), Expect = 5e-08
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +3
Query: 165 RTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKT 317
+ A PA+ AG++ GV++WRI F+ +D+G FY GDSYI+L T
Sbjct: 352 KESAEGEPAWEGAGKEVGVQVWRIVKFKVTHWPKQDYGHFYNGDSYIVLNT 402
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Frame = +3
Query: 180 VHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWD--- 350
V AF AG++ G+EIWRI+ + VA K +G FY GDSYI L ++ D
Sbjct: 3 VDDAFVQAGQKPGLEIWRIEKLKVVAQDPKTYGTFYSGDSYICLSVELHYKSLNKGDVFI 62
Query: 351 ------IHYWIGSETSQDEAGAAAILTVGL-DDKFGGAAVQH 455
I+ W GS+ S+ E + + D++ GG A H
Sbjct: 63 LDDGLNIYCWNGSQCSRVERMKGIDVAKRIRDEERGGRAQVH 104
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +3
Query: 348 DIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTS 506
++H+W+GSE S +E AA V L K G VQ+REA G+E+ F + F S
Sbjct: 22 NLHFWVGSECSAEEYCTAAYKAVELFVKLEGKPVQYREAEGYETEEFRKCFQS 74
>SB_14141| Best HMM Match : HH_signal (HMM E-Value=0)
Length = 754
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 240 NFEPVAVQSKDFGK-FYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEAGAAAILTV 416
N + V +++K + FY GDSY+IL DK N +H G S DE AA +
Sbjct: 662 NMKLVKMENKVIKEGFYDGDSYVILDYRKDKTNKKQPVLHILHGKNASTDELFFAATKAI 721
Query: 417 GLDDK-FGGAAVQHREAMGHESNHF 488
+DD+ FGG A Q + E F
Sbjct: 722 AIDDEYFGGKAKQTVQVCCREKVQF 746
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 309 LKTTSDKRNNLSWDIHYWIGSETSQDEAG 395
LKT D+ + L W I+YWIG E S++E G
Sbjct: 260 LKTELDETDQLFWQIYYWIGKEASREEQG 288
>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
Length = 693
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
Frame = +3
Query: 198 NAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIIL--------KTTSDKRNNLSWDI 353
N GV +W I + + +++ G F+ G+ Y+I + +D+++ +
Sbjct: 214 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 273
Query: 354 --------HYWIGSETSQDEAGAAAILTVGLDDKFG 437
+W G++ + +E GAAA++ V LD++ G
Sbjct: 274 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERG 309
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
Frame = +3
Query: 198 NAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIIL--------KTTSDKRNNLSWDI 353
N GV +W I + + +++ G F+ G+ Y+I + +D+++ +
Sbjct: 1769 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 1828
Query: 354 --------HYWIGSETSQDEAGAAAILTVGLDDKFG 437
+W G++ + +E GAAA++ V LD++ G
Sbjct: 1829 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERG 1864
>SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 357 YWIGSETSQDEAGAAAILTVGLDDKFG-GAAVQHREAMGHESNHFLQY-FTSALQYLDG 527
+W G +++ +E GAAA++TV +D + G +H + + + F Y S Y DG
Sbjct: 197 FWQGHDSTVNEKGAAALMTVEIDSEKGPQITFKHTVTVRFDIDTFFIYRECSCFFYCDG 255
>SB_3684| Best HMM Match : fn3 (HMM E-Value=8e-11)
Length = 862
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = -2
Query: 553 TWLKPDGLPPSKYCSADVKYCRK--WLLSWPIASRCCTAAP 437
TW KPDG+P V +C + W ++ PI + + P
Sbjct: 388 TWQKPDGIPDKYIPGVSVSWCYQCDWEVTPPIVTETSVSVP 428
>SB_56058| Best HMM Match : Phasin (HMM E-Value=2.7)
Length = 314
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 376 LVRMKRERLPS*LSASMTSSVERRYNTARLWATRVTTSYSTSHLHYNT 519
L+R+ +E L LS + + ++ +N LW+ ++S ++H H T
Sbjct: 122 LIRLGKEELRR-LSIQLVNKLDTTWNNCLLWSIPTSSSLDSAHAHLKT 168
>SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +3
Query: 357 YWIGSETSQDEAGAAAILTVGLDDKFG 437
+W G +++ +E GAAA++TV +D + G
Sbjct: 37 FWQGHDSTVNEKGAAALMTVEIDSEKG 63
>SB_4460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 685
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 542 FQPRRDESGCRETYVPRLKARG 607
F+ +RDE+GC + Y RL A+G
Sbjct: 577 FKVKRDENGCVDRYKARLVAQG 598
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 315 TTSDKRNNLSWDIHYWIGSETSQDEAGAAAILT 413
++S+ N WD YW ET + + AA +T
Sbjct: 2031 SSSESLNRSKWDARYWAKFETERKKHQRAASMT 2063
>SB_50341| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 315 TTSDKRNNLSWDIHYWIGSETSQDEAGAAAILT 413
++S+ N WD YW ET + + AA +T
Sbjct: 42 SSSESLNRSKWDARYWAKFETERKKHQRAASMT 74
>SB_43353| Best HMM Match : 7tm_1 (HMM E-Value=2.7e-07)
Length = 244
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 420 LDDKFGGAAVQHREAMGHESNHFLQYFTSALQYL 521
+DDKF G ++ S L YFT L YL
Sbjct: 74 VDDKFRGILAYCKQNQSEYSFQALDYFTGVLHYL 107
>SB_10433| Best HMM Match : Keratin_B2 (HMM E-Value=4.4)
Length = 212
Score = 27.5 bits (58), Expect = 9.4
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 340 YHGIYITGSEARLVRMKRERLPS*LSASMTSSVERRYNTARLWATRVTTSYSTSHLH-YN 516
Y+ + G+ + R+ L T+ V+ + R T TTS +T H+H YN
Sbjct: 17 YNTTHYLGTRYCPAQQNSRRIRYSLLTLPTALVQHQATPTRHVHTNNTTSQATRHVHTYN 76
Query: 517 TWMGVTRPVSTTS*RIRVPRNV 582
T +R V T + + R+V
Sbjct: 77 TTSQASRYVHTYNTTSQATRHV 98
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,709,689
Number of Sequences: 59808
Number of extensions: 472757
Number of successful extensions: 1375
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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