Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_B21
         (626 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70755-3|CAA94782.1|  475|Caenorhabditis elegans Hypothetical pr...   116   2e-26
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho...    85   5e-17
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi...    85   5e-17
U80848-1|AAB37990.3|  389|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AF016655-9|AAK31440.1|  348|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z46791-6|CAA86759.1|  395|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>Z70755-3|CAA94782.1|  475|Caenorhabditis elegans Hypothetical
           protein K06A4.3 protein.
          Length = 475

 Score =  116 bits (278), Expect = 2e-26
 Identities = 55/123 (44%), Positives = 69/123 (56%)
 Frame = +3

Query: 186 PAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWI 365
           PA A  G++ G+ +WRI  F    V   D G FY GD+YI L    D      WD+H+W+
Sbjct: 8   PALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG----CWDVHFWL 63

Query: 366 GSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGF 545
           G   S DE G AAI TV +DD  GG   QHRE   +ES  FL YF   ++Y+ GG  SG+
Sbjct: 64  GKNASTDEIGVAAIKTVEIDDSLGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGY 123

Query: 546 NHV 554
            HV
Sbjct: 124 RHV 126


>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
           homolog protein.
          Length = 1257

 Score = 84.6 bits (200), Expect = 5e-17
 Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
 Frame = +3

Query: 198 NAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSET 377
           + G   G+ +W I+NF P  +     G+FY  D+Y++LKTT +    L   I YW+G   
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562

Query: 378 SQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNP-SGFNHV 554
           S D+   +A+  VGL +         RE M  E+  FL  F   + Y++GG   SGF + 
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-YT 621

Query: 555 VTNPGAEKRMF 587
              P    R++
Sbjct: 622 TEKPAHLTRLY 632


>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
           flightless) homologprotein 1 protein.
          Length = 1257

 Score = 84.6 bits (200), Expect = 5e-17
 Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
 Frame = +3

Query: 198 NAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSET 377
           + G   G+ +W I+NF P  +     G+FY  D+Y++LKTT +    L   I YW+G   
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562

Query: 378 SQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNP-SGFNHV 554
           S D+   +A+  VGL +         RE M  E+  FL  F   + Y++GG   SGF + 
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-YT 621

Query: 555 VTNPGAEKRMF 587
              P    R++
Sbjct: 622 TEKPAHLTRLY 632


>U80848-1|AAB37990.3|  389|Caenorhabditis elegans Hypothetical
           protein T10H10.3 protein.
          Length = 389

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 228 WRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIH 356
           W + NFE +        K YK + + I+K    KRN L+ +IH
Sbjct: 332 WDLFNFEQLTEYEHLMMKLYKQEVFDIVKKYEKKRNVLNREIH 374


>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical protein
            F21H12.6 protein.
          Length = 1374

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +3

Query: 351  IHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAM 467
            +H  +G++ S D A +A+  T+G + KF G A+   + M
Sbjct: 966  VHVKLGNKISVDLAASASDATLGKECKFAGKALLPNQEM 1004


>AF016655-9|AAK31440.1|  348|Caenorhabditis elegans Hypothetical
           protein C17F4.5 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -3

Query: 309 ELYRNLLCRTSQSLSIGLRLVQNSESAKFRHQL 211
           +L   LL    + LSIGL L+ NSE  KF   L
Sbjct: 95  DLISRLLSGYQEPLSIGLLLIPNSEVLKFPESL 127


>Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical
           protein C41C4.7b protein.
          Length = 374

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = +3

Query: 69  LLVTLGACAYARTAIRQQSVNTQITSLS-DKDARTKARVHP-AFANAGRQAGVEIWRIQN 242
           +L++ G C+ A T +R+  + + +TSLS  K A T  +  P A+ N  R++ V  W I N
Sbjct: 245 VLISFGFCSAAATVLRKIQLLSFVTSLSYIKMAVTCCKYFPQAYFNYTRKSTVG-WSIGN 303


>Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical
           protein C41C4.7a protein.
          Length = 404

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = +3

Query: 69  LLVTLGACAYARTAIRQQSVNTQITSLS-DKDARTKARVHP-AFANAGRQAGVEIWRIQN 242
           +L++ G C+ A T +R+  + + +TSLS  K A T  +  P A+ N  R++ V  W I N
Sbjct: 245 VLISFGFCSAAATVLRKIQLLSFVTSLSYIKMAVTCCKYFPQAYFNYTRKSTVG-WSIGN 303


>Z46791-6|CAA86759.1|  395|Caenorhabditis elegans Hypothetical
           protein C09G5.7 protein.
          Length = 395

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/58 (24%), Positives = 28/58 (48%)
 Frame = +3

Query: 117 QQSVNTQITSLSDKDARTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYK 290
           + S N+  +S S K  RT+ +  P   N  ++ G  +W + + +P  +   + G+  K
Sbjct: 160 ESSHNSGQSSKSRKSQRTRGKSTPLDRNIFKENGEPVWVVPDRKPGELVMNEHGEMVK 217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,683,159
Number of Sequences: 27780
Number of extensions: 342611
Number of successful extensions: 887
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)