Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_B21
         (626 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    22   5.6  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   7.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   7.4  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   9.8  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +2

Query: 2   VHVSFAYIVNSHIKQNEIHKCVAVGDPWGVCVRAHCHTAAI 124
           V  +  Y V  H  ++ +    A+GD +GV +  H  T  I
Sbjct: 99  VRSAIKYWVERH--KHIVRLVTAIGDAYGVALLLHMLTTTI 137


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 157 RMPEPRLEFIQH 192
           R PEP +E I+H
Sbjct: 490 RQPEPLIELIEH 501


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 624 LSHSNIPLAFNLGTYVSRHP 565
           L+HS+ P A  +G     HP
Sbjct: 448 LAHSSYPAAIQIGHTPHHHP 467


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/30 (30%), Positives = 11/30 (36%)
 Frame = -1

Query: 623 CLTRTFLLPLTXEHTFLGTRIRHDVVETGR 534
           C  + F   L          I HDV  TG+
Sbjct: 155 CSPKLFAFDLNTSQLLKQVEIPHDVATTGK 184


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,456
Number of Sequences: 438
Number of extensions: 4331
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)