BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_B19
(545 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 97 3e-22
AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 97 3e-22
AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein. 97 4e-22
AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein. 97 4e-22
AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase p... 54 4e-09
L76038-1|AAC27383.1| 683|Anopheles gambiae prophenoloxidase pro... 52 1e-08
AF031626-1|AAD01936.1| 683|Anopheles gambiae prophenoloxidase p... 52 1e-08
AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8... 52 2e-08
AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase p... 52 2e-08
AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase... 50 4e-08
AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7... 47 4e-07
AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase p... 47 5e-07
AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase... 42 1e-05
AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9... 40 4e-05
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 25 2.2
DQ974173-1|ABJ52813.1| 553|Anopheles gambiae serpin 16 protein. 23 6.6
DQ230893-2|ABD94312.1| 525|Anopheles gambiae iduronate 2-sulfat... 23 6.6
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 23 6.6
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 8.7
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 23 8.7
>U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein.
Length = 692
Score = 97.1 bits (231), Expect = 3e-22
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 3/183 (1%)
Frame = +2
Query: 5 NSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNGLGSIPEFSWY 184
N+YYYYF F +++G +K RRGE+Y+ +Q L RY ER++N +G++ W
Sbjct: 232 NAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWYMHQMLLARYNLERMSNYMGTVKPLVWR 291
Query: 185 SPIKTGYYPLMTSYY--FPFAQRPDNYNLHSVKNYEAIRFLDIFEKTFVQSLQKGKF-ES 355
P+KTGY+ L+ SY+ PF R NY + S ++Y + +++ +E + ++ G F +
Sbjct: 292 FPLKTGYFSLL-SYWNGVPFKSRDYNYMI-SDESYYKLDWINAWEAKIRKIIEDGFFVKE 349
Query: 356 YGKKIDFHDEKAINFVGNYWQENADLYEEEVTKDYQRSYEIVARHVLGAAPKPFDKHTFM 535
G +I+ +++ F GN N D V +Y E+ +R +L F+ +
Sbjct: 350 DGTRINLRLPESVEFFGNLLNSNVD----SVDANYVGYIEVFSRLLLSG--NDFNAYKVW 403
Query: 536 PSA 544
PSA
Sbjct: 404 PSA 406
>AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 97.1 bits (231), Expect = 3e-22
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 3/183 (1%)
Frame = +2
Query: 5 NSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNGLGSIPEFSWY 184
N+YYYYF F +++G +K RRGE+Y+ +Q L RY ER++N +G++ W
Sbjct: 232 NAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWYMHQMLLARYNLERMSNYMGTVKPLVWR 291
Query: 185 SPIKTGYYPLMTSYY--FPFAQRPDNYNLHSVKNYEAIRFLDIFEKTFVQSLQKGKF-ES 355
P+KTGY+ L+ SY+ PF R NY + S ++Y + +++ +E + ++ G F +
Sbjct: 292 FPLKTGYFSLL-SYWNGVPFKSRDYNYMI-SDESYYKLDWINAWEAKIRKIIEDGFFVKE 349
Query: 356 YGKKIDFHDEKAINFVGNYWQENADLYEEEVTKDYQRSYEIVARHVLGAAPKPFDKHTFM 535
G +I+ +++ F GN N D V +Y E+ +R +L F+ +
Sbjct: 350 DGTRINLRLPESVEFFGNLLNSNVD----SVDANYVGYIEVFSRLLLSG--NDFNAYKVW 403
Query: 536 PSA 544
PSA
Sbjct: 404 PSA 406
>AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 96.7 bits (230), Expect = 4e-22
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 3/183 (1%)
Frame = +2
Query: 5 NSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNGLGSIPEFSWY 184
N+YYYYF F +++G +K RRGE+Y+ +Q L RY ER++N +G++ W
Sbjct: 232 NAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWYMHQMLLARYNLERMSNYMGTVKPLVWR 291
Query: 185 SPIKTGYYPLMTSYY--FPFAQRPDNYNLHSVKNYEAIRFLDIFEKTFVQSLQKGKF-ES 355
P+KTGY+ L+ SY+ PF R NY + S ++Y + +++ +E + ++ G F +
Sbjct: 292 FPLKTGYFSLL-SYWNGVPFKSRDYNYMI-SDESYFKLDWINAWEAKIRKIIEDGFFVKE 349
Query: 356 YGKKIDFHDEKAINFVGNYWQENADLYEEEVTKDYQRSYEIVARHVLGAAPKPFDKHTFM 535
G +I+ +++ F GN N D V +Y E+ +R +L F+ +
Sbjct: 350 DGTRINLRLPESVEFFGNLLNSNVD----SVDANYVGYIEVFSRLLLSG--NDFNAYKVW 403
Query: 536 PSA 544
PSA
Sbjct: 404 PSA 406
>AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 96.7 bits (230), Expect = 4e-22
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 3/183 (1%)
Frame = +2
Query: 5 NSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNGLGSIPEFSWY 184
N+YYYYF F +++G +K RRGE+Y+ +Q L RY ER++N +G++ W
Sbjct: 232 NAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWYMHQMLLARYNLERMSNYMGTVKPLVWR 291
Query: 185 SPIKTGYYPLMTSYY--FPFAQRPDNYNLHSVKNYEAIRFLDIFEKTFVQSLQKGKF-ES 355
P+KTGY+ L+ SY+ PF R NY + S ++Y + +++ +E + ++ G F +
Sbjct: 292 FPLKTGYFSLL-SYWNGVPFKSRDYNYMI-SDESYFKLDWINAWEAKIRKIIEDGFFVKE 349
Query: 356 YGKKIDFHDEKAINFVGNYWQENADLYEEEVTKDYQRSYEIVARHVLGAAPKPFDKHTFM 535
G +I+ +++ F GN N D V +Y E+ +R +L F+ +
Sbjct: 350 DGTRINLRLPESVEFFGNLLNSNVD----SVDANYVGYIEVFSRLLLSG--NDFNAYKVW 403
Query: 536 PSA 544
PSA
Sbjct: 404 PSA 406
>AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 53.6 bits (123), Expect = 4e-09
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
Frame = +2
Query: 17 YYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNGLGSIPEFSWY-SPI 193
+++H HL + + K RRGE++Y+ +QQ RY ER NGL FS I
Sbjct: 208 HHWHWHLVYPATGPDRVVRKDRRGELFYHMHQQTIARYNIERFANGLARTLSFSQLRESI 267
Query: 194 KTGYYP--LMTSYYFPFAQRPDNY---NLHSVKNYEAIRF--LDIFEKTFVQSLQKGKFE 352
Y+P + +S F+ R N +++ V++ IR +D+ K +++ G +
Sbjct: 268 PEAYFPKIVRSSDGRAFSCRYPNQVMKDVNRVEDESTIRLADMDVSIKRIFEAIDNGYAQ 327
Query: 353 -SYGKKIDFHDEKAINFVGNYWQENADLYEEEVTKDYQRSYEIVARHV 493
+ G ++ +EK I+ +G+ + + + DY ++ ++ ++
Sbjct: 328 ATNGDRVPLDNEKGIDLIGDLLEASTNSINFNYYGDYHQNGHVMLGYI 375
>L76038-1|AAC27383.1| 683|Anopheles gambiae prophenoloxidase
protein.
Length = 683
Score = 52.0 bits (119), Expect = 1e-08
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Frame = +2
Query: 5 NSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNGLGSIPEF-SW 181
N +++++H PF S+ + K RRGE++Y +QQL RY FER +N L + +
Sbjct: 204 NLHHWHWHLVYPFDASNRAIVD-KDRRGELFYYMHQQLVARYNFERFSNRLQRVKRLNNL 262
Query: 182 YSPIKTGYYP----LMTSYYFP---FAQRPDNYNLHSVKNYEAIRFLDIFEKTFVQSLQK 340
PI GY+P L+ S +P A + N + + + + L+ + +++ +
Sbjct: 263 REPISEGYFPKLDSLVASRAWPGRVDASVLKDLNREADQIKQDVADLERWIDRIYEAIHQ 322
Query: 341 G-KFESYGKKIDFHDEKAINFVGN 409
G + G +I ++K I+ +GN
Sbjct: 323 GFVVDESGNRIPLDEQKGIDHLGN 346
>AF031626-1|AAD01936.1| 683|Anopheles gambiae prophenoloxidase
protein.
Length = 683
Score = 52.0 bits (119), Expect = 1e-08
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Frame = +2
Query: 5 NSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNGLGSIPEF-SW 181
N +++++H PF S+ + K RRGE++Y +QQL RY FER +N L + +
Sbjct: 204 NLHHWHWHLVYPFDASNRAIVD-KDRRGELFYYMHQQLVARYNFERFSNRLQRVKRLNNL 262
Query: 182 YSPIKTGYYP----LMTSYYFP---FAQRPDNYNLHSVKNYEAIRFLDIFEKTFVQSLQK 340
PI GY+P L+ S +P A + N + + + + L+ + +++ +
Sbjct: 263 REPISEGYFPKLDSLVASRAWPGRVDASVLKDLNREADQIKQDVADLERWIDRIYEAIHQ 322
Query: 341 G-KFESYGKKIDFHDEKAINFVGN 409
G + G +I ++K I+ +GN
Sbjct: 323 GFVVDESGNRIPLDEQKGIDHLGN 346
>AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8
protein.
Length = 700
Score = 51.6 bits (118), Expect = 2e-08
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Frame = +2
Query: 17 YYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNGLGSI-PEFSWYSPI 193
+++H HL + S K RRGE++Y +QQL RY +R GLG I P + P+
Sbjct: 222 HHWHWHLVYPASGPPDVVRKDRRGELFYYMHQQLLARYQIDRYAQGLGRIEPLANLREPV 281
Query: 194 KTGYYP--LMTSYYFPFAQRPDNYNLHSVKNYE---AIRFLDI--FEKTFVQSLQKG-KF 349
+ YYP L TS F R + V +R DI + ++++ G
Sbjct: 282 REAYYPKLLRTSNNRTFCPRYPGMTISDVARSADRLEVRIADIESWLPRVLEAIDAGFAV 341
Query: 350 ESYGKKIDFHDEKAINFVGNYWQENA 427
G ++ + + I+ +GN + +A
Sbjct: 342 SDDGVRVPLDETRGIDVLGNILERSA 367
>AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase
protein.
Length = 687
Score = 51.6 bits (118), Expect = 2e-08
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Frame = +2
Query: 17 YYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNGLGSI-PEFSWYSPI 193
+++H HL + K RRGE++Y +QQL RY +R N L + P S P+
Sbjct: 208 HHWHWHLVYPGEGPNNVVNKDRRGELFYYMHQQLIARYNVDRFCNRLSRVRPLTSLREPL 267
Query: 194 KTGYYP----LMTSYYFPFAQRPDNYNLHSVKNYE-----AIRFLDIFEKTFVQSLQKGK 346
GY+P +T+ FP RP N L + E +I ++++ +S+ G
Sbjct: 268 PEGYFPKIVRSLTNRGFP--ARPQNTILRDLNRIEDDVVLSITDIELWGSRIAESIDGGY 325
Query: 347 FES-YGKKIDFHDEKAINFVGNYWQENA 427
+ G +I ++ I+ +GN + +A
Sbjct: 326 VVAPGGNRIPLDEQTGIDVLGNIIEPSA 353
>AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase
subunit 2 protein.
Length = 686
Score = 50.4 bits (115), Expect = 4e-08
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Frame = +2
Query: 17 YYFHSHLPFWWSS-ERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNGLGSI-PEFSWYSP 190
+++H HL + +R N K RRGE++Y +QQL RY ER N L + P + P
Sbjct: 207 HHWHWHLVYPGEGPDRVVN-KDRRGELFYYMHQQLIARYNVERFCNRLARVRPLTNLREP 265
Query: 191 IKTGYYP--LMTSYYFPFAQRPDNYNLHSVKNY-EAIRF----LDIFEKTFVQSLQKGKF 349
+ GY+P + + F RP N L + +++ F L+ E +S+ G
Sbjct: 266 LPEGYFPKIIRSLNNRAFPPRPQNTVLRDINRVDDSVTFTVSDLERSESRIAESIDGGYV 325
Query: 350 ES-YGKKIDFHDEKAINFVGNYWQENA 427
G +I + I+ +GN + +A
Sbjct: 326 VGPGGNRIPLDERTGIDVLGNIMEPSA 352
>AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7
protein.
Length = 696
Score = 47.2 bits (107), Expect = 4e-07
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 17 YYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNGLGSI-PEFSWYSPI 193
+++H HL + K RRGE++Y +QQ+ RY ER + GLG + P + +PI
Sbjct: 221 HHWHWHLVYPAEGPERVVRKDRRGELFYYMHQQMIARYQVERYSQGLGRVTPLDNLRTPI 280
Query: 194 KTGYYP 211
YYP
Sbjct: 281 PEPYYP 286
>AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 46.8 bits (106), Expect = 5e-07
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Frame = +2
Query: 17 YYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNGLGSIPEF-SWYSPI 193
+++H HL + K RRGE++Y +QQ RY ER NG+ + F ++ I
Sbjct: 208 HHWHWHLVYPARGPNRIVRKDRRGELFYYMHQQTMARYNIERFANGMPRVVAFRNFREAI 267
Query: 194 KTGYYPLMT--SYYFPFAQRPDNYNLHSVKNYE-----AIRFLDIFEKTFVQSLQKGKFE 352
Y+P +T S + R N L +K E +I ++++ +++ G +
Sbjct: 268 PEAYFPKITRSSDGRSYPARHPNETLSDLKRVEDGVIVSIADMELWTTRIFEAIDNGFAQ 327
Query: 353 -SYGKKIDFHDEKAINFVGN 409
S +++ ++ I+ +GN
Sbjct: 328 SSSNQRVPLDNDSGIDLLGN 347
>AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase
subunit 1 protein.
Length = 688
Score = 42.3 bits (95), Expect = 1e-05
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 9/140 (6%)
Frame = +2
Query: 17 YYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNGLGSIPEFSWY-SPI 193
+++H HL + K RRGE+++ + QL RY +R L + + Y PI
Sbjct: 207 HHWHWHLVYPGDGPDEVVRKDRRGELFFYMHSQLIARYNADRFCAKLKKVRNLTNYREPI 266
Query: 194 KTGYYPLM--TSYYFPFAQRPDNYNLHSVKNYE-----AIRFLDIFEKTFVQSLQKG-KF 349
GYYP M +S + R N L V + ++ L+ + +++ +G
Sbjct: 267 VEGYYPKMIRSSNNRSYPARAANTTLQDVDRVDNGTTVSVNDLERWRDRIHEAIDQGFVL 326
Query: 350 ESYGKKIDFHDEKAINFVGN 409
+ G +I +++ I+ +G+
Sbjct: 327 DKSGNRIMLDEQRGIDILGD 346
>AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9
protein.
Length = 685
Score = 40.3 bits (90), Expect = 4e-05
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 9/175 (5%)
Frame = +2
Query: 17 YYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNGLGSI-PEFSWYSPI 193
+++H HL + K RRGE++Y ++Q RY ER N L ++ P + PI
Sbjct: 208 HHWHWHLVYPQEGPLEVVDKDRRGELFYYMHRQTVARYNVERFCNRLPAVKPLKNLREPI 267
Query: 194 KTGYYP--LMTSYYFPFAQRPDNYNLHSVKNYEAIRFLDIFE-----KTFVQSLQKG-KF 349
Y+P L ++ + R N L V + I E +++Q G
Sbjct: 268 PEAYFPKLLNSALNRTYPGRHANMVLSHVNRPDDDAVATILELESSLGRIKEAIQSGFAM 327
Query: 350 ESYGKKIDFHDEKAINFVGNYWQENADLYEEEVTKDYQRSYEIVARHVLGAAPKP 514
+ G ++ +K I+ +GN EN+ L V Y +Y + ++G P
Sbjct: 328 AADGTRVPLDPKKGIDILGNI-MENSIL---SVNVPYYGNYHSLGHVLIGFIHDP 378
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 24.6 bits (51), Expect = 2.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 131 NNVLLIVGRNCNIFRHG 81
NN LL + +NCN FR+G
Sbjct: 78 NNQLLWLCKNCNEFRNG 94
>DQ974173-1|ABJ52813.1| 553|Anopheles gambiae serpin 16 protein.
Length = 553
Score = 23.0 bits (47), Expect = 6.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 115 INNTLLLRASYKRLGFHT 168
I NT+ LR +RLG HT
Sbjct: 381 ITNTINLRDVLQRLGLHT 398
>DQ230893-2|ABD94312.1| 525|Anopheles gambiae iduronate 2-sulfatase
precursor protein.
Length = 525
Score = 23.0 bits (47), Expect = 6.6
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 230 FPFAQRPDNYNLHSVKN-YEAIRFLD 304
FPF PD++ L ++ Y A+ F+D
Sbjct: 278 FPFGPVPDDFKLRIRQHYYAAVTFVD 303
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 23.0 bits (47), Expect = 6.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 208 SPDDFILFPIRSKAGQ 255
S D F+LFP + K GQ
Sbjct: 389 SHDSFVLFPRKVKVGQ 404
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 22.6 bits (46), Expect = 8.7
Identities = 8/33 (24%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -1
Query: 344 CLSVGTVRK--SFQKCPRTVLLRSSLRCVDCSC 252
C+ G R + ++C +R C++C C
Sbjct: 367 CIDCGANRDGPNCERCKENFFMREDGYCINCGC 399
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 22.6 bits (46), Expect = 8.7
Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = -1
Query: 383 HRGNQFSCHTIRICLSVGTVRKSFQKCPRTV----LLRSSLRCVDCSCPA 246
HR N+ + C ++ T+ F C R +L + V CP+
Sbjct: 975 HRMNRVPSPSCSFCSAIDTLEHKFAGCRRVADAWQILHQRISVVISGCPS 1024
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,390
Number of Sequences: 2352
Number of extensions: 12134
Number of successful extensions: 95
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -