Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_B18
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.67 
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   2.7  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   3.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    20   8.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 0.67
 Identities = 9/37 (24%), Positives = 14/37 (37%)
 Frame = +2

Query: 29   WSTGICWSYRCTRIKGRSRLCWATWTTRKRRLPGEKG 139
            W    CW   C +     +  +A W T  ++    KG
Sbjct: 1519 WEYPKCWQVDCKKGPDSDKQAFAAWVTELKQAFKPKG 1555


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
          protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 98 WPNKALISL*SWCTY 54
          WP +A+ SL  +CTY
Sbjct: 2  WPPEAVHSLERFCTY 16


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -3

Query: 225 GKPASPFWPFSDAKPGSPF*PIEPSKPLSPFSPG 124
           G P SP     DA     F P  P+ P+S FS G
Sbjct: 20  GAPQSPLDMKPDASTLGQFSPQGPNSPVS-FSMG 52



 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 395 HDPLFDLVILENN 357
           +DPL  LV+ ENN
Sbjct: 196 NDPLVALVVNENN 208


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 369 PGEQSNPGIPKS 334
           PG QS PGI  S
Sbjct: 128 PGNQSTPGIKLS 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,519
Number of Sequences: 336
Number of extensions: 2675
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)